data_8B87
#
_model_server_result.job_id            leTMsu-kcGe5ZgwCm2MNnA 
_model_server_result.datetime_utc      '2024-10-10 11:24:27' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          8b87 
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_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"H","auth_seq_id":904}' 
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_entry.id    8B87 
#
_exptl.entry_id    8B87 
_exptl.method      'X-RAY DIFFRACTION' 
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_entity.details                     ? 
_entity.formula_weight              106.12 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            DI(HYDROXYETHYL)ETHER 
_entity.pdbx_number_of_molecules    9 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          107.56 
_cell.angle_gamma         90 
_cell.entry_id            8B87 
_cell.length_a            74.62 
_cell.length_b            31.14 
_cell.length_c            91.76 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 8B87 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        5 
_symmetry.space_group_name_Hall    'C 2y' 
_symmetry.space_group_name_H-M     'C 1 2 1' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    tetrameric 
_pdbx_struct_assembly.oligomeric_count      4 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 4 F N N 
? 4 G N N 
? 4 H N N 
? 4 I N N 
? 4 J N N 
? 4 K N N 
? 4 L N N 
? 4 M N N 
? 4 N N N 
#
_chem_comp.formula           'C4 H10 O3' 
_chem_comp.formula_weight    106.12 
_chem_comp.id                PEG 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              DI(HYDROXYETHYL)ETHER 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
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loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 PEG sing 228 n n 
C1 C2 PEG sing 229 n n 
C1 H11 PEG sing 230 n n 
C1 H12 PEG sing 231 n n 
O1 HO1 PEG sing 232 n n 
C2 O2 PEG sing 233 n n 
C2 H21 PEG sing 234 n n 
C2 H22 PEG sing 235 n n 
O2 C3 PEG sing 236 n n 
C3 C4 PEG sing 237 n n 
C3 H31 PEG sing 238 n n 
C3 H32 PEG sing 239 n n 
C4 O4 PEG sing 240 n n 
C4 H41 PEG sing 241 n n 
C4 H42 PEG sing 242 n n 
O4 HO4 PEG sing 243 n n 
#
_atom_sites.entry_id                     8B87 
_atom_sites.fract_transf_matrix[1][1]    0.013401 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.004241 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.032113 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.011431 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
E 3 SDY A 1 901 1 SDY BGC . 
F 4 PEG A 1 902 4 PEG PEG . 
G 4 PEG A 1 903 5 PEG PEG . 
H 4 PEG A 1 904 6 PEG PEG . 
I 4 PEG A 1 905 10 PEG PEG . 
J 4 PEG A 1 906 14 PEG PEG . 
K 4 PEG B 1 901 7 PEG PEG . 
L 4 PEG B 1 902 12 PEG PEG . 
M 4 PEG B 1 903 13 PEG PEG . 
N 4 PEG C 1 201 2 PEG PEG . 
O 5 NH4 C 1 202 1 NH4 NH4 . 
P 6 HOH A 1 1001 65 HOH HOH . 
P 6 HOH A 2 1002 13 HOH HOH . 
P 6 HOH A 3 1003 102 HOH HOH . 
P 6 HOH A 4 1004 104 HOH HOH . 
P 6 HOH A 5 1005 28 HOH HOH . 
P 6 HOH A 6 1006 16 HOH HOH . 
P 6 HOH A 7 1007 24 HOH HOH . 
P 6 HOH A 8 1008 22 HOH HOH . 
P 6 HOH A 9 1009 63 HOH HOH . 
P 6 HOH A 10 1010 81 HOH HOH . 
P 6 HOH A 11 1011 29 HOH HOH . 
P 6 HOH A 12 1012 8 HOH HOH . 
P 6 HOH A 13 1013 55 HOH HOH . 
P 6 HOH A 14 1014 18 HOH HOH . 
P 6 HOH A 15 1015 86 HOH HOH . 
P 6 HOH A 16 1016 85 HOH HOH . 
P 6 HOH A 17 1017 110 HOH HOH . 
P 6 HOH A 18 1018 6 HOH HOH . 
P 6 HOH A 19 1019 17 HOH HOH . 
P 6 HOH A 20 1020 9 HOH HOH . 
P 6 HOH A 21 1021 15 HOH HOH . 
P 6 HOH A 22 1022 51 HOH HOH . 
P 6 HOH A 23 1023 14 HOH HOH . 
P 6 HOH A 24 1024 23 HOH HOH . 
P 6 HOH A 25 1025 50 HOH HOH . 
P 6 HOH A 26 1026 49 HOH HOH . 
P 6 HOH A 27 1027 39 HOH HOH . 
P 6 HOH A 28 1028 25 HOH HOH . 
P 6 HOH A 29 1029 82 HOH HOH . 
P 6 HOH A 30 1030 37 HOH HOH . 
P 6 HOH A 31 1031 40 HOH HOH . 
P 6 HOH A 32 1032 79 HOH HOH . 
P 6 HOH A 33 1033 12 HOH HOH . 
P 6 HOH A 34 1034 21 HOH HOH . 
P 6 HOH A 35 1035 26 HOH HOH . 
P 6 HOH A 36 1036 36 HOH HOH . 
P 6 HOH A 37 1037 44 HOH HOH . 
P 6 HOH A 38 1038 87 HOH HOH . 
P 6 HOH A 39 1039 116 HOH HOH . 
P 6 HOH A 40 1040 38 HOH HOH . 
P 6 HOH A 41 1041 70 HOH HOH . 
P 6 HOH A 42 1042 84 HOH HOH . 
P 6 HOH A 43 1043 117 HOH HOH . 
P 6 HOH A 44 1044 72 HOH HOH . 
P 6 HOH A 45 1045 83 HOH HOH . 
P 6 HOH A 46 1046 99 HOH HOH . 
P 6 HOH A 47 1047 73 HOH HOH . 
P 6 HOH A 48 1048 112 HOH HOH . 
P 6 HOH A 49 1049 71 HOH HOH . 
P 6 HOH A 50 1050 111 HOH HOH . 
P 6 HOH A 51 1051 101 HOH HOH . 
P 6 HOH A 52 1052 100 HOH HOH . 
Q 6 HOH B 1 1001 3 HOH HOH . 
Q 6 HOH B 2 1002 96 HOH HOH . 
Q 6 HOH B 3 1003 48 HOH HOH . 
Q 6 HOH B 4 1004 67 HOH HOH . 
Q 6 HOH B 5 1005 93 HOH HOH . 
Q 6 HOH B 6 1006 19 HOH HOH . 
Q 6 HOH B 7 1007 32 HOH HOH . 
Q 6 HOH B 8 1008 20 HOH HOH . 
Q 6 HOH B 9 1009 118 HOH HOH . 
Q 6 HOH B 10 1010 115 HOH HOH . 
Q 6 HOH B 11 1011 10 HOH HOH . 
Q 6 HOH B 12 1012 95 HOH HOH . 
Q 6 HOH B 13 1013 41 HOH HOH . 
Q 6 HOH B 14 1014 89 HOH HOH . 
Q 6 HOH B 15 1015 108 HOH HOH . 
Q 6 HOH B 16 1016 107 HOH HOH . 
Q 6 HOH B 17 1017 119 HOH HOH . 
Q 6 HOH B 18 1018 114 HOH HOH . 
Q 6 HOH B 19 1019 109 HOH HOH . 
R 6 HOH C 1 301 42 HOH HOH . 
R 6 HOH C 2 302 92 HOH HOH . 
R 6 HOH C 3 303 105 HOH HOH . 
R 6 HOH C 4 304 113 HOH HOH . 
R 6 HOH C 5 305 80 HOH HOH . 
R 6 HOH C 6 306 106 HOH HOH . 
S 6 HOH D 1 201 120 HOH HOH . 
S 6 HOH D 2 202 35 HOH HOH . 
S 6 HOH D 3 203 121 HOH HOH . 
S 6 HOH D 4 204 69 HOH HOH . 
S 6 HOH D 5 205 103 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 PEG . . . H 4 -19.159 13.391 17.59 1 69.18 ? C1 PEG 904 A 1 
HETATM 2 O O1 PEG . . . H 4 -19.313 14.519 16.772 1 70.49 ? O1 PEG 904 A 1 
HETATM 3 C C2 PEG . . . H 4 -17.749 13.371 18.174 1 68.94 ? C2 PEG 904 A 1 
HETATM 4 O O2 PEG . . . H 4 -17.547 12.163 18.853 1 62.27 ? O2 PEG 904 A 1 
HETATM 5 C C3 PEG . . . H 4 -16.419 12.15 19.68 1 64.61 ? C3 PEG 904 A 1 
HETATM 6 C C4 PEG . . . H 4 -16.831 12.518 21.103 1 68.22 ? C4 PEG 904 A 1 
HETATM 7 O O4 PEG . . . H 4 -15.797 12.185 21.988 1 73.23 ? O4 PEG 904 A 1 
HETATM 8 H H11 PEG . . . H 4 -19.303 12.589 17.064 1 83.16 ? H11 PEG 904 A 1 
HETATM 9 H H12 PEG . . . H 4 -19.807 13.424 18.311 1 83.16 ? H12 PEG 904 A 1 
HETATM 10 H HO1 PEG . . . H 4 -20.126 14.767 16.784 1 84.73 ? HO1 PEG 904 A 1 
HETATM 11 H H21 PEG . . . H 4 -17.643 14.111 18.792 1 82.87 ? H21 PEG 904 A 1 
HETATM 12 H H22 PEG . . . H 4 -17.1 13.452 17.458 1 82.87 ? H22 PEG 904 A 1 
HETATM 13 H H31 PEG . . . H 4 -15.77 12.793 19.354 1 77.67 ? H31 PEG 904 A 1 
HETATM 14 H H32 PEG . . . H 4 -16.025 11.263 19.676 1 77.67 ? H32 PEG 904 A 1 
HETATM 15 H H41 PEG . . . H 4 -17.633 12.029 21.344 1 82 ? H41 PEG 904 A 1 
HETATM 16 H H42 PEG . . . H 4 -17.005 13.471 21.153 1 82 ? H42 PEG 904 A 1 
HETATM 17 H HO4 PEG . . . H 4 -16.126 11.994 22.748 1 88.01 ? HO4 PEG 904 A 1 
#
_model_server_stats.io_time_ms              15 
_model_server_stats.parse_time_ms           12 
_model_server_stats.create_model_time_ms    3 
_model_server_stats.query_time_ms           264 
_model_server_stats.encode_time_ms          3 
_model_server_stats.element_count           17 
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