data_8B8N
#
_model_server_result.job_id            MQd7oooeSLrQj5YjKVa9vQ 
_model_server_result.datetime_utc      '2024-11-06 02:02:00' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          8b8n 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"E","auth_seq_id":904}' 
#
_entry.id    8B8N 
#
_exptl.entry_id    8B8N 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              422.523 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            4-{[6-(cyclohexylmethoxy)-7H-purin-2-yl]amino}-N,N-diethylbenzamide 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            8B8N 
_cell.length_a            57.078 
_cell.length_b            61.164 
_cell.length_c            91.13 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 8B8N 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    'P 2ac 2ab' 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      3 
_struct_asym.id                             E 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
_struct_conn.conn_type_id                   disulf 
_struct_conn.details                        ? 
_struct_conn.id                             disulf1 
_struct_conn.ptnr1_label_asym_id            A 
_struct_conn.ptnr1_label_atom_id            SG 
_struct_conn.ptnr1_label_comp_id            CYS 
_struct_conn.ptnr1_label_seq_id             81 
_struct_conn.ptnr1_auth_asym_id             A 
_struct_conn.ptnr1_auth_comp_id             CYS 
_struct_conn.ptnr1_auth_seq_id              616 
_struct_conn.ptnr1_symmetry                 1_555 
_struct_conn.ptnr2_label_asym_id            A 
_struct_conn.ptnr2_label_atom_id            SG 
_struct_conn.ptnr2_label_comp_id            CYS 
_struct_conn.ptnr2_label_seq_id             83 
_struct_conn.ptnr2_auth_asym_id             A 
_struct_conn.ptnr2_auth_comp_id             CYS 
_struct_conn.ptnr2_auth_seq_id              618 
_struct_conn.ptnr2_symmetry                 1_555 
_struct_conn.pdbx_ptnr1_PDB_ins_code        ? 
_struct_conn.pdbx_ptnr1_label_alt_id        ? 
_struct_conn.pdbx_ptnr1_standard_comp_id    ? 
_struct_conn.pdbx_ptnr2_PDB_ins_code        ? 
_struct_conn.pdbx_ptnr2_label_alt_id        ? 
_struct_conn.pdbx_ptnr3_PDB_ins_code        ? 
_struct_conn.pdbx_ptnr3_label_alt_id        ? 
_struct_conn.pdbx_ptnr3_label_asym_id       ? 
_struct_conn.pdbx_ptnr3_label_atom_id       ? 
_struct_conn.pdbx_ptnr3_label_comp_id       ? 
_struct_conn.pdbx_ptnr3_label_seq_id        ? 
_struct_conn.pdbx_PDB_id                    ? 
_struct_conn.pdbx_dist_value                2.037 
_struct_conn.pdbx_value_order               ? 
#
_chem_comp.formula           'C23 H30 N6 O2' 
_chem_comp.formula_weight    422.523 
_chem_comp.id                AQG 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              4-{[6-(cyclohexylmethoxy)-7H-purin-2-yl]amino}-N,N-diethylbenzamide 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C8 N7 AQG sing 13 n y 
C8 N9 AQG doub 14 n y 
N7 C5 AQG sing 15 n y 
CAJ CAN AQG sing 16 n n 
CAJ CAI AQG sing 17 n n 
CAN CBD AQG sing 18 n n 
N9 C4 AQG sing 19 n y 
C5 C4 AQG doub 20 n y 
C5 C6 AQG sing 21 n y 
CAI CAK AQG sing 22 n n 
O6 C6 AQG sing 23 n n 
O6 CAP AQG sing 24 n n 
C4 N3 AQG sing 25 n y 
C6 N1 AQG doub 26 n y 
CBD CAP AQG sing 27 n n 
CBD CAO AQG sing 28 n n 
CAK CAO AQG sing 29 n n 
N3 C2 AQG doub 30 n y 
N1 C2 AQG sing 31 n y 
C2 N2 AQG sing 32 n n 
N2 CAX AQG sing 33 n n 
CAE CAX AQG doub 34 n y 
CAE CAG AQG sing 35 n y 
CAX CAD AQG sing 36 n y 
CAG CAY AQG doub 37 n y 
CAD CAF AQG doub 38 n y 
CAY CAF AQG sing 39 n y 
CAY CAW AQG sing 40 n n 
OAC CAW AQG doub 41 n n 
CAW NBE AQG sing 42 n n 
NBE CAL AQG sing 43 n n 
NBE CAM AQG sing 44 n n 
CAL CAA AQG sing 45 n n 
CAM CAB AQG sing 46 n n 
C8 H1 AQG sing 47 n n 
N2 H2 AQG sing 48 n n 
CAA H3 AQG sing 49 n n 
CAA H4 AQG sing 50 n n 
CAA H5 AQG sing 51 n n 
CAB H6 AQG sing 52 n n 
CAB H7 AQG sing 53 n n 
CAB H8 AQG sing 54 n n 
CAD H9 AQG sing 55 n n 
CAE H10 AQG sing 56 n n 
CAF H11 AQG sing 57 n n 
CAG H12 AQG sing 58 n n 
CAI H13 AQG sing 59 n n 
CAI H14 AQG sing 60 n n 
CAJ H15 AQG sing 61 n n 
CAJ H16 AQG sing 62 n n 
CAK H17 AQG sing 63 n n 
CAK H18 AQG sing 64 n n 
CAL H19 AQG sing 65 n n 
CAL H20 AQG sing 66 n n 
CAM H21 AQG sing 67 n n 
CAM H22 AQG sing 68 n n 
CAN H23 AQG sing 69 n n 
CAN H24 AQG sing 70 n n 
CAO H25 AQG sing 71 n n 
CAO H26 AQG sing 72 n n 
CAP H27 AQG sing 73 n n 
CAP H28 AQG sing 74 n n 
CBD H29 AQG sing 75 n n 
N7 H30 AQG sing 76 n n 
#
_atom_sites.entry_id                     8B8N 
_atom_sites.fract_transf_matrix[1][1]    0.01752 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.016349 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.010973 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 GOL A 1 901 902 GOL GOL . 
C 2 GOL A 1 902 904 GOL GOL . 
D 2 GOL A 1 903 905 GOL GOL . 
E 3 AQG A 1 904 906 AQG LIG . 
F 4 HOH A 1 1001 75 HOH HOH . 
F 4 HOH A 2 1002 21 HOH HOH . 
F 4 HOH A 3 1003 26 HOH HOH . 
F 4 HOH A 4 1004 54 HOH HOH . 
F 4 HOH A 5 1005 5 HOH HOH . 
F 4 HOH A 6 1006 13 HOH HOH . 
F 4 HOH A 7 1007 25 HOH HOH . 
F 4 HOH A 8 1008 12 HOH HOH . 
F 4 HOH A 9 1009 36 HOH HOH . 
F 4 HOH A 10 1010 44 HOH HOH . 
F 4 HOH A 11 1011 29 HOH HOH . 
F 4 HOH A 12 1012 14 HOH HOH . 
F 4 HOH A 13 1013 83 HOH HOH . 
F 4 HOH A 14 1014 42 HOH HOH . 
F 4 HOH A 15 1015 27 HOH HOH . 
F 4 HOH A 16 1016 11 HOH HOH . 
F 4 HOH A 17 1017 22 HOH HOH . 
F 4 HOH A 18 1018 28 HOH HOH . 
F 4 HOH A 19 1019 87 HOH HOH . 
F 4 HOH A 20 1020 68 HOH HOH . 
F 4 HOH A 21 1021 2 HOH HOH . 
F 4 HOH A 22 1022 23 HOH HOH . 
F 4 HOH A 23 1023 18 HOH HOH . 
F 4 HOH A 24 1024 10 HOH HOH . 
F 4 HOH A 25 1025 31 HOH HOH . 
F 4 HOH A 26 1026 55 HOH HOH . 
F 4 HOH A 27 1027 30 HOH HOH . 
F 4 HOH A 28 1028 39 HOH HOH . 
F 4 HOH A 29 1029 74 HOH HOH . 
F 4 HOH A 30 1030 16 HOH HOH . 
F 4 HOH A 31 1031 34 HOH HOH . 
F 4 HOH A 32 1032 4 HOH HOH . 
F 4 HOH A 33 1033 77 HOH HOH . 
F 4 HOH A 34 1034 9 HOH HOH . 
F 4 HOH A 35 1035 61 HOH HOH . 
F 4 HOH A 36 1036 6 HOH HOH . 
F 4 HOH A 37 1037 57 HOH HOH . 
F 4 HOH A 38 1038 58 HOH HOH . 
F 4 HOH A 39 1039 52 HOH HOH . 
F 4 HOH A 40 1040 66 HOH HOH . 
F 4 HOH A 41 1041 24 HOH HOH . 
F 4 HOH A 42 1042 62 HOH HOH . 
F 4 HOH A 43 1043 41 HOH HOH . 
F 4 HOH A 44 1044 50 HOH HOH . 
F 4 HOH A 45 1045 20 HOH HOH . 
F 4 HOH A 46 1046 45 HOH HOH . 
F 4 HOH A 47 1047 40 HOH HOH . 
F 4 HOH A 48 1048 59 HOH HOH . 
F 4 HOH A 49 1049 64 HOH HOH . 
F 4 HOH A 50 1050 37 HOH HOH . 
F 4 HOH A 51 1051 8 HOH HOH . 
F 4 HOH A 52 1052 48 HOH HOH . 
F 4 HOH A 53 1053 85 HOH HOH . 
F 4 HOH A 54 1054 60 HOH HOH . 
F 4 HOH A 55 1055 78 HOH HOH . 
F 4 HOH A 56 1056 51 HOH HOH . 
F 4 HOH A 57 1057 49 HOH HOH . 
F 4 HOH A 58 1058 67 HOH HOH . 
F 4 HOH A 59 1059 72 HOH HOH . 
F 4 HOH A 60 1060 38 HOH HOH . 
F 4 HOH A 61 1061 65 HOH HOH . 
F 4 HOH A 62 1062 84 HOH HOH . 
F 4 HOH A 63 1063 73 HOH HOH . 
F 4 HOH A 64 1064 76 HOH HOH . 
F 4 HOH A 65 1065 7 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C4 AQG . . . E 3 -0.795 -5.31 0.793 1 48.41 ? C4 AQG 904 A 1 
HETATM 2 C C5 AQG . . . E 3 -2.116 -5.476 0.278 1 53.31 ? C5 AQG 904 A 1 
HETATM 3 C C6 AQG . . . E 3 -2.991 -6.289 1.039 1 63.63 ? C6 AQG 904 A 1 
HETATM 4 C C8 AQG . . . E 3 -0.909 -4.162 -1.088 1 46.79 ? C8 AQG 904 A 1 
HETATM 5 N N1 AQG . . . E 3 -2.578 -6.873 2.192 1 45.44 ? N1 AQG 904 A 1 
HETATM 6 N N2 AQG . . . E 3 -0.798 -7.255 3.85 1 58.82 ? N2 AQG 904 A 1 
HETATM 7 N N3 AQG . . . E 3 -0.344 -5.882 1.951 1 50.93 ? N3 AQG 904 A 1 
HETATM 8 C C2 AQG . . . E 3 -1.248 -6.641 2.619 1 47.75 ? C2 AQG 904 A 1 
HETATM 9 C CAA AQG . . . E 3 -4.546 -11.566 10.915 1 100.29 ? CAA AQG 904 A 1 
HETATM 10 C CAB AQG . . . E 3 -5.179 -8.526 10.147 1 65.99 ? CAB AQG 904 A 1 
HETATM 11 C CAD AQG . . . E 3 -1.226 -8.295 6.089 1 54.53 ? CAD AQG 904 A 1 
HETATM 12 C CAE AQG . . . E 3 -2.582 -8.983 4.265 1 56 ? CAE AQG 904 A 1 
HETATM 13 C CAF AQG . . . E 3 -1.914 -9.167 6.932 1 54.19 ? CAF AQG 904 A 1 
HETATM 14 C CAG AQG . . . E 3 -3.274 -9.86 5.119 1 66.16 ? CAG AQG 904 A 1 
HETATM 15 C CAI AQG . . . E 3 -7.411 -10.593 0.595 1 65.81 ? CAI AQG 904 A 1 
HETATM 16 C CAJ AQG . . . E 3 -6.794 -10.561 1.968 1 77.9 ? CAJ AQG 904 A 1 
HETATM 17 C CAK AQG . . . E 3 -6.315 -10.361 -0.414 1 73.24 ? CAK AQG 904 A 1 
HETATM 18 C CAL AQG . . . E 3 -5.044 -11.417 9.478 1 95.04 ? CAL AQG 904 A 1 
HETATM 19 C CAM AQG . . . E 3 -4.284 -9.029 9.005 1 66.57 ? CAM AQG 904 A 1 
HETATM 20 C CAN AQG . . . E 3 -6.173 -9.197 2.277 1 83.43 ? CAN AQG 904 A 1 
HETATM 21 C CAO AQG . . . E 3 -5.669 -8.991 -0.256 1 64.49 ? CAO AQG 904 A 1 
HETATM 22 C CAP AQG . . . E 3 -5.201 -7.038 1.343 1 70.55 ? CAP AQG 904 A 1 
HETATM 23 C CAW AQG . . . E 3 -3.704 -10.919 7.381 1 84.44 ? CAW AQG 904 A 1 
HETATM 24 C CAX AQG . . . E 3 -1.527 -8.163 4.73 1 51.68 ? CAX AQG 904 A 1 
HETATM 25 C CAY AQG . . . E 3 -2.958 -9.969 6.476 1 71.96 ? CAY AQG 904 A 1 
HETATM 26 C CBD AQG . . . E 3 -5.248 -8.623 1.17 1 61.47 ? CBD AQG 904 A 1 
HETATM 27 N N7 AQG . . . E 3 -2.164 -4.748 -0.904 1 56.97 ? N7 AQG 904 A 1 
HETATM 28 N N9 AQG . . . E 3 -0.053 -4.48 -0.081 1 46.73 ? N9 AQG 904 A 1 
HETATM 29 N NBE AQG . . . E 3 -4.34 -10.46 8.608 1 81.22 ? NBE AQG 904 A 1 
HETATM 30 O O6 AQG . . . E 3 -4.251 -6.428 0.517 1 70.64 ? O6 AQG 904 A 1 
HETATM 31 O OAC AQG . . . E 3 -3.773 -12.114 7.097 1 89.8 ? OAC AQG 904 A 1 
HETATM 32 H H1 AQG . . . E 3 -0.712 -3.536 -1.96 1 56.4 ? H1 AQG 904 A 1 
HETATM 33 H H2 AQG . . . E 3 0.15 -7.016 4.127 1 70.83 ? H2 AQG 904 A 1 
HETATM 34 H H3 AQG . . . E 3 -3.772 -10.823 11.169 1 120.59 ? H3 AQG 904 A 1 
HETATM 35 H H4 AQG . . . E 3 -5.353 -11.439 11.654 1 120.59 ? H4 AQG 904 A 1 
HETATM 36 H H5 AQG . . . E 3 -4.102 -12.556 11.104 1 120.59 ? H5 AQG 904 A 1 
HETATM 37 H H6 AQG . . . E 3 -4.755 -8.695 11.14 1 79.43 ? H6 AQG 904 A 1 
HETATM 38 H H7 AQG . . . E 3 -6.163 -9.001 10.171 1 79.43 ? H7 AQG 904 A 1 
HETATM 39 H H8 AQG . . . E 3 -5.381 -7.452 10.101 1 79.43 ? H8 AQG 904 A 1 
HETATM 40 H H9 AQG . . . E 3 -0.417 -7.689 6.506 1 65.68 ? H9 AQG 904 A 1 
HETATM 41 H H10 AQG . . . E 3 -2.886 -8.954 3.221 1 67.45 ? H10 AQG 904 A 1 
HETATM 42 H H11 AQG . . . E 3 -1.618 -9.217 7.986 1 65.28 ? H11 AQG 904 A 1 
HETATM 43 H H12 AQG . . . E 3 -4.089 -10.491 4.753 1 79.64 ? H12 AQG 904 A 1 
HETATM 44 H H13 AQG . . . E 3 -7.95 -11.553 0.406 1 79.22 ? H13 AQG 904 A 1 
HETATM 45 H H14 AQG . . . E 3 -8.231 -9.841 0.494 1 79.22 ? H14 AQG 904 A 1 
HETATM 46 H H15 AQG . . . E 3 -6.051 -11.379 2.072 1 93.73 ? H15 AQG 904 A 1 
HETATM 47 H H16 AQG . . . E 3 -7.546 -10.849 2.732 1 93.73 ? H16 AQG 904 A 1 
HETATM 48 H H17 AQG . . . E 3 -5.561 -11.171 -0.342 1 88.13 ? H17 AQG 904 A 1 
HETATM 49 H H18 AQG . . . E 3 -6.714 -10.5 -1.44 1 88.13 ? H18 AQG 904 A 1 
HETATM 50 H H19 AQG . . . E 3 -5.028 -12.419 8.991 1 114.3 ? H19 AQG 904 A 1 
HETATM 51 H H20 AQG . . . E 3 -6.124 -11.148 9.502 1 114.3 ? H20 AQG 904 A 1 
HETATM 52 H H21 AQG . . . E 3 -4.486 -8.411 8.096 1 80.13 ? H21 AQG 904 A 1 
HETATM 53 H H22 AQG . . . E 3 -3.223 -8.781 9.249 1 80.13 ? H22 AQG 904 A 1 
HETATM 54 H H23 AQG . . . E 3 -5.629 -9.277 3.244 1 100.37 ? H23 AQG 904 A 1 
HETATM 55 H H24 AQG . . . E 3 -6.997 -8.488 2.511 1 100.37 ? H24 AQG 904 A 1 
HETATM 56 H H25 AQG . . . E 3 -6.363 -8.221 -0.646 1 77.64 ? H25 AQG 904 A 1 
HETATM 57 H H26 AQG . . . E 3 -4.793 -8.929 -0.928 1 77.64 ? H26 AQG 904 A 1 
HETATM 58 H H27 AQG . . . E 3 -6.188 -6.587 1.108 1 84.91 ? H27 AQG 904 A 1 
HETATM 59 H H28 AQG . . . E 3 -4.96 -6.764 2.392 1 84.91 ? H28 AQG 904 A 1 
HETATM 60 H H29 AQG . . . E 3 -4.267 -9.126 1.353 1 74.02 ? H29 AQG 904 A 1 
HETATM 61 H H30 AQG . . . E 3 -2.931 -4.625 -1.554 1 68.61 ? H30 AQG 904 A 1 
#
_model_server_stats.io_time_ms              18 
_model_server_stats.parse_time_ms           22 
_model_server_stats.create_model_time_ms    15 
_model_server_stats.query_time_ms           255 
_model_server_stats.encode_time_ms          6 
_model_server_stats.element_count           61 
#