data_8B93 # _model_server_result.job_id SBvgZCD9g_i-s769KaTo_g _model_server_result.datetime_utc '2025-01-10 15:06:31' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8b93 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":501}' # _entry.id 8B93 # _exptl.entry_id 8B93 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 570.935 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 4-chloranyl-6-fluoranyl-~{N}1-[[4-fluoranyl-2-(2-methoxyethoxymethyl)phenyl]methyl]-~{N}3-[2-methyl-4-(trifluoromethyl)phenyl]benzene-1,3-dicarboxamide _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 8B93 _cell.length_a 59.979 _cell.length_b 85.479 _cell.length_c 121.588 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8B93 _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA dimeric 2 author_and_software_defined_assembly 1 PISA dimeric 2 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,E,G 1 1 B,D,F,H,I 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 E N N ? 3 F N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A SG CYS 87 A CYS 285 1_555 E C3 Q8F . A Q8F 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.682 ? covale ? covale2 B SG CYS 87 B CYS 285 1_555 F C3 Q8F . B Q8F 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.721 ? # _chem_comp.formula 'C27 H24 Cl F5 N2 O4' _chem_comp.formula_weight 570.935 _chem_comp.id Q8F _chem_comp.mon_nstd_flag . _chem_comp.name 4-chloranyl-6-fluoranyl-~{N}1-[[4-fluoranyl-2-(2-methoxyethoxymethyl)phenyl]methyl]-~{N}3-[2-methyl-4-(trifluoromethyl)phenyl]benzene-1,3-dicarboxamide _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag F38 C35 Q8F sing 277 n n C30 C29 Q8F sing 278 n n C31 C29 Q8F doub 279 n y C31 C32 Q8F sing 280 n y C35 F36 Q8F sing 281 n n C35 C32 Q8F sing 282 n n C35 F37 Q8F sing 283 n n C29 C28 Q8F sing 284 n y C32 C33 Q8F doub 285 n y C28 N27 Q8F sing 286 n n C28 C34 Q8F doub 287 n y N27 C26 Q8F sing 288 n n C33 C34 Q8F sing 289 n y C3 C4 Q8F doub 290 n y C3 C2 Q8F sing 291 n y C26 C2 Q8F sing 292 n n C26 O39 Q8F doub 293 n n C4 C5 Q8F sing 294 n y C2 C1 Q8F doub 295 n y C5 F24 Q8F sing 296 n n C5 C6 Q8F doub 297 n y C1 C6 Q8F sing 298 n y C6 C7 Q8F sing 299 n n C7 N8 Q8F sing 300 n n C7 O23 Q8F doub 301 n n C14 C15 Q8F doub 302 n y C14 C13 Q8F sing 303 n y N8 C9 Q8F sing 304 n n C15 C10 Q8F sing 305 n y F16 C13 Q8F sing 306 n n C13 C12 Q8F doub 307 n y C10 C9 Q8F sing 308 n n C10 C11 Q8F doub 309 n y C12 C11 Q8F sing 310 n y C11 C17 Q8F sing 311 n n C17 O18 Q8F sing 312 n n O18 C19 Q8F sing 313 n n C19 C20 Q8F sing 314 n n C20 O21 Q8F sing 315 n n O21 C22 Q8F sing 316 n n C4 H1 Q8F sing 317 n n C15 H2 Q8F sing 318 n n C17 H3 Q8F sing 319 n n C17 H4 Q8F sing 320 n n C20 H5 Q8F sing 321 n n C20 H6 Q8F sing 322 n n C22 H7 Q8F sing 323 n n C22 H8 Q8F sing 324 n n C22 H9 Q8F sing 325 n n C30 H10 Q8F sing 326 n n C30 H11 Q8F sing 327 n n C30 H12 Q8F sing 328 n n C31 H13 Q8F sing 329 n n C33 H14 Q8F sing 330 n n C34 H15 Q8F sing 331 n n N27 H16 Q8F sing 332 n n C1 H17 Q8F sing 333 n n N8 H19 Q8F sing 334 n n C9 H20 Q8F sing 335 n n C9 H21 Q8F sing 336 n n C14 H22 Q8F sing 337 n n C12 H23 Q8F sing 338 n n C19 H24 Q8F sing 339 n n C19 H25 Q8F sing 340 n n C3 CL1 Q8F sing 341 n n # _atom_sites.entry_id 8B93 _atom_sites.fract_transf_matrix[1][1] 0.016673 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011699 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008224 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 3 Q8F A 1 501 501 Q8F LIG . F 3 Q8F B 1 501 501 Q8F LIG . G 4 HOH A 1 601 33 HOH HOH . G 4 HOH A 2 602 27 HOH HOH . G 4 HOH A 3 603 47 HOH HOH . G 4 HOH A 4 604 24 HOH HOH . G 4 HOH A 5 605 50 HOH HOH . G 4 HOH A 6 606 16 HOH HOH . G 4 HOH A 7 607 1 HOH HOH . G 4 HOH A 8 608 61 HOH HOH . G 4 HOH A 9 609 58 HOH HOH . G 4 HOH A 10 610 15 HOH HOH . G 4 HOH A 11 611 21 HOH HOH . G 4 HOH A 12 612 12 HOH HOH . G 4 HOH A 13 613 3 HOH HOH . G 4 HOH A 14 614 32 HOH HOH . G 4 HOH A 15 615 6 HOH HOH . G 4 HOH A 16 616 44 HOH HOH . G 4 HOH A 17 617 46 HOH HOH . G 4 HOH A 18 618 28 HOH HOH . G 4 HOH A 19 619 5 HOH HOH . G 4 HOH A 20 620 34 HOH HOH . G 4 HOH A 21 621 31 HOH HOH . G 4 HOH A 22 622 18 HOH HOH . G 4 HOH A 23 623 62 HOH HOH . G 4 HOH A 24 624 43 HOH HOH . G 4 HOH A 25 625 26 HOH HOH . G 4 HOH A 26 626 42 HOH HOH . G 4 HOH A 27 627 17 HOH HOH . G 4 HOH A 28 628 55 HOH HOH . G 4 HOH A 29 629 39 HOH HOH . G 4 HOH A 30 630 51 HOH HOH . G 4 HOH A 31 631 56 HOH HOH . G 4 HOH A 32 632 53 HOH HOH . G 4 HOH A 33 633 48 HOH HOH . G 4 HOH A 34 634 9 HOH HOH . G 4 HOH A 35 635 29 HOH HOH . G 4 HOH A 36 636 63 HOH HOH . G 4 HOH A 37 637 11 HOH HOH . H 4 HOH B 1 601 54 HOH HOH . H 4 HOH B 2 602 20 HOH HOH . H 4 HOH B 3 603 23 HOH HOH . H 4 HOH B 4 604 8 HOH HOH . H 4 HOH B 5 605 41 HOH HOH . H 4 HOH B 6 606 57 HOH HOH . H 4 HOH B 7 607 52 HOH HOH . H 4 HOH B 8 608 59 HOH HOH . H 4 HOH B 9 609 38 HOH HOH . H 4 HOH B 10 610 10 HOH HOH . H 4 HOH B 11 611 19 HOH HOH . H 4 HOH B 12 612 30 HOH HOH . H 4 HOH B 13 613 49 HOH HOH . H 4 HOH B 14 614 2 HOH HOH . H 4 HOH B 15 615 13 HOH HOH . H 4 HOH B 16 616 25 HOH HOH . H 4 HOH B 17 617 36 HOH HOH . H 4 HOH B 18 618 40 HOH HOH . H 4 HOH B 19 619 14 HOH HOH . H 4 HOH B 20 620 60 HOH HOH . H 4 HOH B 21 621 45 HOH HOH . H 4 HOH B 22 622 4 HOH HOH . H 4 HOH B 23 623 22 HOH HOH . H 4 HOH B 24 624 35 HOH HOH . H 4 HOH B 25 625 37 HOH HOH . I 4 HOH D 1 2401 7 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C4 Q8F . . . E 3 9.182 0.153 5.257 1 45.53 ? C4 Q8F 501 A 1 HETATM 2 C C5 Q8F . . . E 3 9.454 -0.392 6.496 1 48.72 ? C5 Q8F 501 A 1 HETATM 3 C C6 Q8F . . . E 3 10.48 0.135 7.273 1 51.37 ? C6 Q8F 501 A 1 HETATM 4 C C7 Q8F . . . E 3 10.891 -0.362 8.621 1 55.24 ? C7 Q8F 501 A 1 HETATM 5 C C10 Q8F . . . E 3 12.779 -2.873 9.971 1 64.6 ? C10 Q8F 501 A 1 HETATM 6 C C13 Q8F . . . E 3 15.329 -3.933 9.607 1 73.66 ? C13 Q8F 501 A 1 HETATM 7 C C15 Q8F . . . E 3 13.575 -2.511 8.89 1 67.12 ? C15 Q8F 501 A 1 HETATM 8 C C17 Q8F . . . E 3 12.506 -4.204 12.121 1 68.39 ? C17 Q8F 501 A 1 HETATM 9 C C20 Q8F . . . E 3 11.309 -1.695 14.358 1 66.84 ? C20 Q8F 501 A 1 HETATM 10 C C22 Q8F . . . E 3 12.555 -0.503 16.131 1 68.98 ? C22 Q8F 501 A 1 HETATM 11 C C26 Q8F . . . E 3 11.868 2.81 5.13 1 42.83 ? C26 Q8F 501 A 1 HETATM 12 C C28 Q8F . . . E 3 13.618 3.145 3.563 1 44.85 ? C28 Q8F 501 A 1 HETATM 13 C C30 Q8F . . . E 3 12.65 3.362 1.246 1 41.97 ? C30 Q8F 501 A 1 HETATM 14 C C29 Q8F . . . E 3 13.736 3.649 2.264 1 43.61 ? C29 Q8F 501 A 1 HETATM 15 C C31 Q8F . . . E 3 14.861 4.375 1.859 1 43.25 ? C31 Q8F 501 A 1 HETATM 16 C C32 Q8F . . . E 3 15.903 4.672 2.708 1 43.19 ? C32 Q8F 501 A 1 HETATM 17 C C35 Q8F . . . E 3 17.067 5.508 2.175 1 50.94 ? C35 Q8F 501 A 1 HETATM 18 F F37 Q8F . . . E 3 17 6.732 2.72 1 55.56 ? F37 Q8F 501 A 1 HETATM 19 F F38 Q8F . . . E 3 16.986 5.599 0.855 1 50.5 ? F38 Q8F 501 A 1 HETATM 20 F F36 Q8F . . . E 3 18.284 5.028 2.414 1 50.4 ? F36 Q8F 501 A 1 HETATM 21 C C33 Q8F . . . E 3 15.784 4.221 4.024 1 44.75 ? C33 Q8F 501 A 1 HETATM 22 C C34 Q8F . . . E 3 14.666 3.455 4.457 1 44.84 ? C34 Q8F 501 A 1 HETATM 23 N N27 Q8F . . . E 3 12.407 2.599 3.923 1 41.63 ? N27 Q8F 501 A 1 HETATM 24 O O39 Q8F . . . E 3 12.284 3.625 5.939 1 44.09 ? O39 Q8F 501 A 1 HETATM 25 C C2 Q8F . . . E 3 10.908 1.756 5.551 1 42.83 ? C2 Q8F 501 A 1 HETATM 26 C C1 Q8F . . . E 3 11.212 1.192 6.77 1 45.47 ? C1 Q8F 501 A 1 HETATM 27 C C3 Q8F . . . E 3 9.903 1.218 4.777 1 43.35 ? C3 Q8F 501 A 1 HETATM 28 F F24 Q8F . . . E 3 8.677 -1.403 6.881 1 42.56 ? F24 Q8F 501 A 1 HETATM 29 O O23 Q8F . . . E 3 11.302 0.485 9.408 1 64.19 ? O23 Q8F 501 A 1 HETATM 30 N N8 Q8F . . . E 3 10.873 -1.663 8.882 1 52.91 ? N8 Q8F 501 A 1 HETATM 31 C C9 Q8F . . . E 3 11.399 -2.242 10.114 1 60.2 ? C9 Q8F 501 A 1 HETATM 32 C C14 Q8F . . . E 3 14.841 -3.025 8.699 1 65.63 ? C14 Q8F 501 A 1 HETATM 33 F F16 Q8F . . . E 3 16.563 -4.426 9.41 1 76.57 ? F16 Q8F 501 A 1 HETATM 34 C C12 Q8F . . . E 3 14.553 -4.31 10.708 1 70.94 ? C12 Q8F 501 A 1 HETATM 35 C C11 Q8F . . . E 3 13.28 -3.789 10.891 1 65.01 ? C11 Q8F 501 A 1 HETATM 36 O O18 Q8F . . . E 3 12.776 -3.236 13.161 1 59.72 ? O18 Q8F 501 A 1 HETATM 37 C C19 Q8F . . . E 3 11.795 -3.144 14.201 1 64.91 ? C19 Q8F 501 A 1 HETATM 38 O O21 Q8F . . . E 3 11.376 -1.219 15.718 1 72.55 ? O21 Q8F 501 A 1 # _model_server_stats.io_time_ms 57 _model_server_stats.parse_time_ms 23 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 304 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 38 #