data_8B96 # _model_server_result.job_id 7I6FAjSmVJiX9XmYEqZFMw _model_server_result.datetime_utc '2024-12-22 21:25:50' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8b96 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":204}' # _entry.id 8B96 # _exptl.entry_id 8B96 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 62.068 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1,2-ETHANEDIOL _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 8B96 _cell.length_a 44.431 _cell.length_b 47.338 _cell.length_c 58.112 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8B96 _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 C N N ? 3 E N N # _chem_comp.formula 'C2 H6 O2' _chem_comp.formula_weight 62.068 _chem_comp.id EDO _chem_comp.mon_nstd_flag . _chem_comp.name 1,2-ETHANEDIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'ETHYLENE GLYCOL' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 EDO sing 92 n n C1 C2 EDO sing 93 n n C1 H11 EDO sing 94 n n C1 H12 EDO sing 95 n n O1 HO1 EDO sing 96 n n C2 O2 EDO sing 97 n n C2 H21 EDO sing 98 n n C2 H22 EDO sing 99 n n O2 HO2 EDO sing 100 n n # _atom_sites.entry_id 8B96 _atom_sites.fract_transf_matrix[1][1] 0.022507 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.021125 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.017208 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 Q2F A 1 201 201 Q2F LIG . C 3 EDO A 1 202 301 EDO EDO . D 4 DMS A 1 203 401 DMS DMS . E 3 EDO A 1 204 501 EDO EDO . F 5 HOH A 1 301 25 HOH HOH . F 5 HOH A 2 302 100 HOH HOH . F 5 HOH A 3 303 120 HOH HOH . F 5 HOH A 4 304 91 HOH HOH . F 5 HOH A 5 305 68 HOH HOH . F 5 HOH A 6 306 71 HOH HOH . F 5 HOH A 7 307 93 HOH HOH . F 5 HOH A 8 308 59 HOH HOH . F 5 HOH A 9 309 18 HOH HOH . F 5 HOH A 10 310 125 HOH HOH . F 5 HOH A 11 311 67 HOH HOH . F 5 HOH A 12 312 69 HOH HOH . F 5 HOH A 13 313 58 HOH HOH . F 5 HOH A 14 314 53 HOH HOH . F 5 HOH A 15 315 104 HOH HOH . F 5 HOH A 16 316 2 HOH HOH . F 5 HOH A 17 317 124 HOH HOH . F 5 HOH A 18 318 56 HOH HOH . F 5 HOH A 19 319 83 HOH HOH . F 5 HOH A 20 320 34 HOH HOH . F 5 HOH A 21 321 3 HOH HOH . F 5 HOH A 22 322 35 HOH HOH . F 5 HOH A 23 323 77 HOH HOH . F 5 HOH A 24 324 84 HOH HOH . F 5 HOH A 25 325 118 HOH HOH . F 5 HOH A 26 326 48 HOH HOH . F 5 HOH A 27 327 42 HOH HOH . F 5 HOH A 28 328 28 HOH HOH . F 5 HOH A 29 329 52 HOH HOH . F 5 HOH A 30 330 45 HOH HOH . F 5 HOH A 31 331 8 HOH HOH . F 5 HOH A 32 332 46 HOH HOH . F 5 HOH A 33 333 33 HOH HOH . F 5 HOH A 34 334 4 HOH HOH . F 5 HOH A 35 335 20 HOH HOH . F 5 HOH A 36 336 10 HOH HOH . F 5 HOH A 37 337 76 HOH HOH . F 5 HOH A 38 338 7 HOH HOH . F 5 HOH A 39 339 9 HOH HOH . F 5 HOH A 40 340 95 HOH HOH . F 5 HOH A 41 341 73 HOH HOH . F 5 HOH A 42 342 17 HOH HOH . F 5 HOH A 43 343 21 HOH HOH . F 5 HOH A 44 344 107 HOH HOH . F 5 HOH A 45 345 89 HOH HOH . F 5 HOH A 46 346 1 HOH HOH . F 5 HOH A 47 347 30 HOH HOH . F 5 HOH A 48 348 62 HOH HOH . F 5 HOH A 49 349 23 HOH HOH . F 5 HOH A 50 350 55 HOH HOH . F 5 HOH A 51 351 70 HOH HOH . F 5 HOH A 52 352 6 HOH HOH . F 5 HOH A 53 353 80 HOH HOH . F 5 HOH A 54 354 108 HOH HOH . F 5 HOH A 55 355 19 HOH HOH . F 5 HOH A 56 356 24 HOH HOH . F 5 HOH A 57 357 26 HOH HOH . F 5 HOH A 58 358 90 HOH HOH . F 5 HOH A 59 359 13 HOH HOH . F 5 HOH A 60 360 81 HOH HOH . F 5 HOH A 61 361 63 HOH HOH . F 5 HOH A 62 362 29 HOH HOH . F 5 HOH A 63 363 39 HOH HOH . F 5 HOH A 64 364 65 HOH HOH . F 5 HOH A 65 365 38 HOH HOH . F 5 HOH A 66 366 61 HOH HOH . F 5 HOH A 67 367 43 HOH HOH . F 5 HOH A 68 368 51 HOH HOH . F 5 HOH A 69 369 14 HOH HOH . F 5 HOH A 70 370 12 HOH HOH . F 5 HOH A 71 371 106 HOH HOH . F 5 HOH A 72 372 5 HOH HOH . F 5 HOH A 73 373 50 HOH HOH . F 5 HOH A 74 374 22 HOH HOH . F 5 HOH A 75 375 16 HOH HOH . F 5 HOH A 76 376 40 HOH HOH . F 5 HOH A 77 377 27 HOH HOH . F 5 HOH A 78 378 47 HOH HOH . F 5 HOH A 79 379 49 HOH HOH . F 5 HOH A 80 380 15 HOH HOH . F 5 HOH A 81 381 87 HOH HOH . F 5 HOH A 82 382 127 HOH HOH . F 5 HOH A 83 383 36 HOH HOH . F 5 HOH A 84 384 44 HOH HOH . F 5 HOH A 85 385 115 HOH HOH . F 5 HOH A 86 386 32 HOH HOH . F 5 HOH A 87 387 113 HOH HOH . F 5 HOH A 88 388 117 HOH HOH . F 5 HOH A 89 389 11 HOH HOH . F 5 HOH A 90 390 72 HOH HOH . F 5 HOH A 91 391 109 HOH HOH . F 5 HOH A 92 392 57 HOH HOH . F 5 HOH A 93 393 60 HOH HOH . F 5 HOH A 94 394 122 HOH HOH . F 5 HOH A 95 395 98 HOH HOH . F 5 HOH A 96 396 37 HOH HOH . F 5 HOH A 97 397 121 HOH HOH . F 5 HOH A 98 398 99 HOH HOH . F 5 HOH A 99 399 114 HOH HOH . F 5 HOH A 100 400 97 HOH HOH . F 5 HOH A 101 401 128 HOH HOH . F 5 HOH A 102 402 96 HOH HOH . F 5 HOH A 103 403 86 HOH HOH . F 5 HOH A 104 404 101 HOH HOH . F 5 HOH A 105 405 119 HOH HOH . F 5 HOH A 106 406 82 HOH HOH . F 5 HOH A 107 407 103 HOH HOH . F 5 HOH A 108 408 112 HOH HOH . F 5 HOH A 109 409 123 HOH HOH . F 5 HOH A 110 410 75 HOH HOH . F 5 HOH A 111 411 66 HOH HOH . F 5 HOH A 112 412 111 HOH HOH . F 5 HOH A 113 413 41 HOH HOH . F 5 HOH A 114 414 110 HOH HOH . F 5 HOH A 115 415 102 HOH HOH . F 5 HOH A 116 416 85 HOH HOH . F 5 HOH A 117 417 78 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 EDO . . . E 3 -12.289 6.425 33.185 1 51.64 ? C1 EDO 204 A 1 HETATM 2 O O1 EDO . . . E 3 -13.282 6.796 32.222 1 88.25 ? O1 EDO 204 A 1 HETATM 3 C C2 EDO . . . E 3 -12.494 4.97 33.591 1 69.49 ? C2 EDO 204 A 1 HETATM 4 O O2 EDO . . . E 3 -12.351 4.116 32.448 1 35.21 ? O2 EDO 204 A 1 # _model_server_stats.io_time_ms 14 _model_server_stats.parse_time_ms 19 _model_server_stats.create_model_time_ms 10 _model_server_stats.query_time_ms 289 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 4 #