data_8B9N # _model_server_result.job_id jmfSEe_2sddi297gLxLQGA _model_server_result.datetime_utc '2024-11-25 22:35:53' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8b9n # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":401}' # _entry.id 8B9N # _exptl.entry_id 8B9N _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 65.409 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ZINC ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 8B9N _cell.length_a 75.056 _cell.length_b 75.056 _cell.length_c 220.292 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8B9N _symmetry.cell_setting ? _symmetry.Int_Tables_number 91 _symmetry.space_group_name_Hall 'P 4w 2c' _symmetry.space_group_name_H-M 'P 41 2 2' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? dimeric 2 author_defined_assembly 1 ? dimeric 2 author_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,E,G,H 1 1 C,D,F,I,J 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 E N N ? 3 F N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A N MET 1 A MET 1 1_555 B C1' DRZ 5 B DRZ 12 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.477 ? covale ? covale2 B O3' DA 4 B DA 3 1_555 B P DRZ 5 B DRZ 12 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.558 ? covale ? covale3 B O3' DRZ 5 B DRZ 12 1_555 B P DG 6 B DG 13 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.556 ? covale ? covale4 C N MET 1 C MET 1 1_555 D C1' DRZ 5 D DRZ 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.474 ? covale ? covale5 D O3' DA 4 D DA 402 1_555 D P DRZ 5 D DRZ 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.557 ? covale ? covale6 D O3' DRZ 5 D DRZ 403 1_555 D P DG 6 D DG 409 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.552 ? metalc ? metalc1 A SG CYS 255 A CYS 255 1_555 E ZN ZN . A ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.343 ? metalc ? metalc2 A SG CYS 258 A CYS 258 1_555 E ZN ZN . A ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.33 ? metalc ? metalc3 A SG CYS 277 A CYS 277 1_555 E ZN ZN . A ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.305 ? metalc ? metalc4 A SG CYS 280 A CYS 280 1_555 E ZN ZN . A ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.307 ? metalc ? metalc5 C SG CYS 255 C CYS 255 1_555 F ZN ZN . C ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.325 ? metalc ? metalc6 C SG CYS 258 C CYS 258 1_555 F ZN ZN . C ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.339 ? metalc ? metalc7 C SG CYS 277 C CYS 277 1_555 F ZN ZN . C ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.311 ? metalc ? metalc8 C SG CYS 280 C CYS 280 1_555 F ZN ZN . C ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.321 ? # _chem_comp.formula 'Zn 2' _chem_comp.formula_weight 65.409 _chem_comp.id ZN _chem_comp.mon_nstd_flag . _chem_comp.name 'ZINC ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 8B9N _atom_sites.fract_transf_matrix[1][1] 0.013323 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013323 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.004539 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 3 ZN A 1 401 401 ZN ZN . F 3 ZN C 1 401 401 ZN ZN . G 4 HOH A 1 501 36 HOH HOH . G 4 HOH A 2 502 88 HOH HOH . G 4 HOH A 3 503 71 HOH HOH . G 4 HOH A 4 504 168 HOH HOH . G 4 HOH A 5 505 81 HOH HOH . G 4 HOH A 6 506 37 HOH HOH . G 4 HOH A 7 507 126 HOH HOH . G 4 HOH A 8 508 208 HOH HOH . G 4 HOH A 9 509 34 HOH HOH . G 4 HOH A 10 510 209 HOH HOH . G 4 HOH A 11 511 46 HOH HOH . G 4 HOH A 12 512 5 HOH HOH . G 4 HOH A 13 513 22 HOH HOH . G 4 HOH A 14 514 9 HOH HOH . G 4 HOH A 15 515 135 HOH HOH . G 4 HOH A 16 516 185 HOH HOH . G 4 HOH A 17 517 118 HOH HOH . G 4 HOH A 18 518 75 HOH HOH . G 4 HOH A 19 519 13 HOH HOH . G 4 HOH A 20 520 8 HOH HOH . G 4 HOH A 21 521 29 HOH HOH . G 4 HOH A 22 522 127 HOH HOH . G 4 HOH A 23 523 68 HOH HOH . G 4 HOH A 24 524 96 HOH HOH . G 4 HOH A 25 525 184 HOH HOH . G 4 HOH A 26 526 51 HOH HOH . G 4 HOH A 27 527 166 HOH HOH . G 4 HOH A 28 528 105 HOH HOH . G 4 HOH A 29 529 79 HOH HOH . G 4 HOH A 30 530 136 HOH HOH . G 4 HOH A 31 531 54 HOH HOH . G 4 HOH A 32 532 207 HOH HOH . G 4 HOH A 33 533 122 HOH HOH . G 4 HOH A 34 534 6 HOH HOH . G 4 HOH A 35 535 2 HOH HOH . G 4 HOH A 36 536 39 HOH HOH . G 4 HOH A 37 537 4 HOH HOH . G 4 HOH A 38 538 84 HOH HOH . G 4 HOH A 39 539 123 HOH HOH . G 4 HOH A 40 540 205 HOH HOH . G 4 HOH A 41 541 21 HOH HOH . G 4 HOH A 42 542 162 HOH HOH . G 4 HOH A 43 543 35 HOH HOH . G 4 HOH A 44 544 56 HOH HOH . G 4 HOH A 45 545 70 HOH HOH . G 4 HOH A 46 546 11 HOH HOH . G 4 HOH A 47 547 108 HOH HOH . G 4 HOH A 48 548 124 HOH HOH . G 4 HOH A 49 549 72 HOH HOH . G 4 HOH A 50 550 33 HOH HOH . G 4 HOH A 51 551 10 HOH HOH . G 4 HOH A 52 552 40 HOH HOH . G 4 HOH A 53 553 18 HOH HOH . G 4 HOH A 54 554 194 HOH HOH . G 4 HOH A 55 555 174 HOH HOH . G 4 HOH A 56 556 80 HOH HOH . G 4 HOH A 57 557 48 HOH HOH . G 4 HOH A 58 558 128 HOH HOH . G 4 HOH A 59 559 119 HOH HOH . G 4 HOH A 60 560 91 HOH HOH . G 4 HOH A 61 561 44 HOH HOH . G 4 HOH A 62 562 121 HOH HOH . G 4 HOH A 63 563 115 HOH HOH . G 4 HOH A 64 564 14 HOH HOH . G 4 HOH A 65 565 141 HOH HOH . G 4 HOH A 66 566 42 HOH HOH . G 4 HOH A 67 567 170 HOH HOH . G 4 HOH A 68 568 95 HOH HOH . G 4 HOH A 69 569 210 HOH HOH . G 4 HOH A 70 570 55 HOH HOH . G 4 HOH A 71 571 154 HOH HOH . G 4 HOH A 72 572 158 HOH HOH . G 4 HOH A 73 573 15 HOH HOH . G 4 HOH A 74 574 114 HOH HOH . G 4 HOH A 75 575 65 HOH HOH . G 4 HOH A 76 576 151 HOH HOH . G 4 HOH A 77 577 106 HOH HOH . G 4 HOH A 78 578 149 HOH HOH . G 4 HOH A 79 579 26 HOH HOH . G 4 HOH A 80 580 78 HOH HOH . G 4 HOH A 81 581 155 HOH HOH . G 4 HOH A 82 582 23 HOH HOH . G 4 HOH A 83 583 102 HOH HOH . G 4 HOH A 84 584 20 HOH HOH . G 4 HOH A 85 585 193 HOH HOH . G 4 HOH A 86 586 103 HOH HOH . G 4 HOH A 87 587 113 HOH HOH . G 4 HOH A 88 588 63 HOH HOH . G 4 HOH A 89 589 147 HOH HOH . G 4 HOH A 90 590 19 HOH HOH . G 4 HOH A 91 591 47 HOH HOH . G 4 HOH A 92 592 86 HOH HOH . G 4 HOH A 93 593 156 HOH HOH . G 4 HOH A 94 594 107 HOH HOH . G 4 HOH A 95 595 92 HOH HOH . G 4 HOH A 96 596 157 HOH HOH . G 4 HOH A 97 597 85 HOH HOH . G 4 HOH A 98 598 132 HOH HOH . G 4 HOH A 99 599 148 HOH HOH . G 4 HOH A 100 600 165 HOH HOH . G 4 HOH A 101 601 199 HOH HOH . G 4 HOH A 102 602 140 HOH HOH . G 4 HOH A 103 603 62 HOH HOH . G 4 HOH A 104 604 187 HOH HOH . G 4 HOH A 105 605 59 HOH HOH . G 4 HOH A 106 606 143 HOH HOH . G 4 HOH A 107 607 1 HOH HOH . G 4 HOH A 108 608 182 HOH HOH . G 4 HOH A 109 609 204 HOH HOH . G 4 HOH A 110 610 195 HOH HOH . G 4 HOH A 111 611 200 HOH HOH . G 4 HOH A 112 612 212 HOH HOH . G 4 HOH A 113 613 171 HOH HOH . G 4 HOH A 114 614 202 HOH HOH . G 4 HOH A 115 615 203 HOH HOH . G 4 HOH A 116 616 64 HOH HOH . G 4 HOH A 117 617 181 HOH HOH . G 4 HOH A 118 618 89 HOH HOH . G 4 HOH A 119 619 186 HOH HOH . G 4 HOH A 120 620 188 HOH HOH . G 4 HOH A 121 621 214 HOH HOH . G 4 HOH A 122 622 213 HOH HOH . G 4 HOH A 123 623 129 HOH HOH . G 4 HOH A 124 624 137 HOH HOH . G 4 HOH A 125 625 142 HOH HOH . G 4 HOH A 126 626 152 HOH HOH . G 4 HOH A 127 627 163 HOH HOH . G 4 HOH A 128 628 49 HOH HOH . G 4 HOH A 129 629 180 HOH HOH . H 4 HOH B 1 101 61 HOH HOH . H 4 HOH B 2 102 41 HOH HOH . I 4 HOH C 1 501 117 HOH HOH . I 4 HOH C 2 502 66 HOH HOH . I 4 HOH C 3 503 131 HOH HOH . I 4 HOH C 4 504 43 HOH HOH . I 4 HOH C 5 505 31 HOH HOH . I 4 HOH C 6 506 30 HOH HOH . I 4 HOH C 7 507 98 HOH HOH . I 4 HOH C 8 508 179 HOH HOH . I 4 HOH C 9 509 97 HOH HOH . I 4 HOH C 10 510 144 HOH HOH . I 4 HOH C 11 511 178 HOH HOH . I 4 HOH C 12 512 167 HOH HOH . I 4 HOH C 13 513 146 HOH HOH . I 4 HOH C 14 514 133 HOH HOH . I 4 HOH C 15 515 60 HOH HOH . I 4 HOH C 16 516 53 HOH HOH . I 4 HOH C 17 517 74 HOH HOH . I 4 HOH C 18 518 90 HOH HOH . I 4 HOH C 19 519 27 HOH HOH . I 4 HOH C 20 520 50 HOH HOH . I 4 HOH C 21 521 100 HOH HOH . I 4 HOH C 22 522 111 HOH HOH . I 4 HOH C 23 523 73 HOH HOH . I 4 HOH C 24 524 12 HOH HOH . I 4 HOH C 25 525 77 HOH HOH . I 4 HOH C 26 526 28 HOH HOH . I 4 HOH C 27 527 104 HOH HOH . I 4 HOH C 28 528 173 HOH HOH . I 4 HOH C 29 529 175 HOH HOH . I 4 HOH C 30 530 183 HOH HOH . I 4 HOH C 31 531 83 HOH HOH . I 4 HOH C 32 532 112 HOH HOH . I 4 HOH C 33 533 7 HOH HOH . I 4 HOH C 34 534 191 HOH HOH . I 4 HOH C 35 535 76 HOH HOH . I 4 HOH C 36 536 32 HOH HOH . I 4 HOH C 37 537 177 HOH HOH . I 4 HOH C 38 538 25 HOH HOH . I 4 HOH C 39 539 130 HOH HOH . I 4 HOH C 40 540 93 HOH HOH . I 4 HOH C 41 541 206 HOH HOH . I 4 HOH C 42 542 17 HOH HOH . I 4 HOH C 43 543 16 HOH HOH . I 4 HOH C 44 544 101 HOH HOH . I 4 HOH C 45 545 125 HOH HOH . I 4 HOH C 46 546 145 HOH HOH . I 4 HOH C 47 547 52 HOH HOH . I 4 HOH C 48 548 116 HOH HOH . I 4 HOH C 49 549 150 HOH HOH . I 4 HOH C 50 550 120 HOH HOH . I 4 HOH C 51 551 211 HOH HOH . I 4 HOH C 52 552 67 HOH HOH . I 4 HOH C 53 553 160 HOH HOH . I 4 HOH C 54 554 99 HOH HOH . I 4 HOH C 55 555 110 HOH HOH . I 4 HOH C 56 556 3 HOH HOH . I 4 HOH C 57 557 192 HOH HOH . I 4 HOH C 58 558 69 HOH HOH . I 4 HOH C 59 559 58 HOH HOH . I 4 HOH C 60 560 189 HOH HOH . I 4 HOH C 61 561 57 HOH HOH . I 4 HOH C 62 562 172 HOH HOH . I 4 HOH C 63 563 159 HOH HOH . I 4 HOH C 64 564 109 HOH HOH . I 4 HOH C 65 565 176 HOH HOH . I 4 HOH C 66 566 24 HOH HOH . I 4 HOH C 67 567 164 HOH HOH . I 4 HOH C 68 568 82 HOH HOH . I 4 HOH C 69 569 190 HOH HOH . I 4 HOH C 70 570 201 HOH HOH . I 4 HOH C 71 571 197 HOH HOH . I 4 HOH C 72 572 138 HOH HOH . I 4 HOH C 73 573 198 HOH HOH . I 4 HOH C 74 574 94 HOH HOH . I 4 HOH C 75 575 161 HOH HOH . I 4 HOH C 76 576 134 HOH HOH . I 4 HOH C 77 577 169 HOH HOH . J 4 HOH D 1 501 38 HOH HOH . J 4 HOH D 2 502 87 HOH HOH . J 4 HOH D 3 503 45 HOH HOH . J 4 HOH D 4 504 139 HOH HOH . J 4 HOH D 5 505 196 HOH HOH . J 4 HOH D 6 506 153 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol ZN _atom_site.label_atom_id ZN _atom_site.label_comp_id ZN _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id F _atom_site.label_entity_id 3 _atom_site.Cartn_x 45.885 _atom_site.Cartn_y 26.832 _atom_site.Cartn_z 83.356 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 35.78 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id ZN _atom_site.auth_comp_id ZN _atom_site.auth_seq_id 401 _atom_site.auth_asym_id C _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 68 _model_server_stats.parse_time_ms 25 _model_server_stats.create_model_time_ms 9 _model_server_stats.query_time_ms 297 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 1 #