data_8BA3 # _model_server_result.job_id di-bnMjNMnFJKdc1Y3NArw _model_server_result.datetime_utc '2024-11-06 03:46:25' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8ba3 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":905}' # _entry.id 8BA3 # _exptl.entry_id 8BA3 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 92.094 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description GLYCEROL _entity.pdbx_number_of_molecules 5 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 91.622 _cell.angle_gamma 90 _cell.entry_id 8BA3 _cell.length_a 78.224 _cell.length_b 57.756 _cell.length_c 60.633 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8BA3 _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall 'C 2y' _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 C N N ? 3 D N N ? 3 E N N ? 3 F N N ? 3 G N N # _struct_conn.conn_type_id disulf _struct_conn.details ? _struct_conn.id disulf1 _struct_conn.ptnr1_label_asym_id A _struct_conn.ptnr1_label_atom_id SG _struct_conn.ptnr1_label_comp_id CYS _struct_conn.ptnr1_label_seq_id 81 _struct_conn.ptnr1_auth_asym_id A _struct_conn.ptnr1_auth_comp_id CYS _struct_conn.ptnr1_auth_seq_id 616 _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id A _struct_conn.ptnr2_label_atom_id SG _struct_conn.ptnr2_label_comp_id CYS _struct_conn.ptnr2_label_seq_id 83 _struct_conn.ptnr2_auth_asym_id A _struct_conn.ptnr2_auth_comp_id CYS _struct_conn.ptnr2_auth_seq_id 618 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_PDB_id ? _struct_conn.pdbx_dist_value 2.059 _struct_conn.pdbx_value_order ? # _chem_comp.formula 'C3 H8 O3' _chem_comp.formula_weight 92.094 _chem_comp.id GOL _chem_comp.mon_nstd_flag . _chem_comp.name GLYCEROL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms GLYCERIN;PROPANE-1,2,3-TRIOL # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 GOL sing 129 n n C1 C2 GOL sing 130 n n C1 H11 GOL sing 131 n n C1 H12 GOL sing 132 n n O1 HO1 GOL sing 133 n n C2 O2 GOL sing 134 n n C2 C3 GOL sing 135 n n C2 H2 GOL sing 136 n n O2 HO2 GOL sing 137 n n C3 O3 GOL sing 138 n n C3 H31 GOL sing 139 n n C3 H32 GOL sing 140 n n O3 HO3 GOL sing 141 n n # _atom_sites.entry_id 8BA3 _atom_sites.fract_transf_matrix[1][1] 0.012784 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.000362 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.017314 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.016499 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 Q8U A 1 901 901 Q8U JNJ . C 3 GOL A 1 902 903 GOL GOL . D 3 GOL A 1 903 904 GOL GOL . E 3 GOL A 1 904 905 GOL GOL . F 3 GOL A 1 905 906 GOL GOL . G 3 GOL A 1 906 907 GOL GOL . H 4 HOH A 1 1001 240 HOH HOH . H 4 HOH A 2 1002 64 HOH HOH . H 4 HOH A 3 1003 285 HOH HOH . H 4 HOH A 4 1004 288 HOH HOH . H 4 HOH A 5 1005 174 HOH HOH . H 4 HOH A 6 1006 115 HOH HOH . H 4 HOH A 7 1007 213 HOH HOH . H 4 HOH A 8 1008 221 HOH HOH . H 4 HOH A 9 1009 46 HOH HOH . H 4 HOH A 10 1010 61 HOH HOH . H 4 HOH A 11 1011 130 HOH HOH . H 4 HOH A 12 1012 274 HOH HOH . H 4 HOH A 13 1013 168 HOH HOH . H 4 HOH A 14 1014 181 HOH HOH . H 4 HOH A 15 1015 256 HOH HOH . H 4 HOH A 16 1016 86 HOH HOH . H 4 HOH A 17 1017 202 HOH HOH . H 4 HOH A 18 1018 160 HOH HOH . H 4 HOH A 19 1019 172 HOH HOH . H 4 HOH A 20 1020 66 HOH HOH . H 4 HOH A 21 1021 161 HOH HOH . H 4 HOH A 22 1022 73 HOH HOH . H 4 HOH A 23 1023 80 HOH HOH . H 4 HOH A 24 1024 209 HOH HOH . H 4 HOH A 25 1025 60 HOH HOH . H 4 HOH A 26 1026 101 HOH HOH . H 4 HOH A 27 1027 84 HOH HOH . H 4 HOH A 28 1028 25 HOH HOH . H 4 HOH A 29 1029 32 HOH HOH . H 4 HOH A 30 1030 165 HOH HOH . H 4 HOH A 31 1031 121 HOH HOH . H 4 HOH A 32 1032 54 HOH HOH . H 4 HOH A 33 1033 108 HOH HOH . H 4 HOH A 34 1034 110 HOH HOH . H 4 HOH A 35 1035 201 HOH HOH . H 4 HOH A 36 1036 260 HOH HOH . H 4 HOH A 37 1037 233 HOH HOH . H 4 HOH A 38 1038 63 HOH HOH . H 4 HOH A 39 1039 277 HOH HOH . H 4 HOH A 40 1040 45 HOH HOH . H 4 HOH A 41 1041 129 HOH HOH . H 4 HOH A 42 1042 51 HOH HOH . H 4 HOH A 43 1043 10 HOH HOH . H 4 HOH A 44 1044 97 HOH HOH . H 4 HOH A 45 1045 132 HOH HOH . H 4 HOH A 46 1046 72 HOH HOH . H 4 HOH A 47 1047 36 HOH HOH . H 4 HOH A 48 1048 266 HOH HOH . H 4 HOH A 49 1049 182 HOH HOH . H 4 HOH A 50 1050 242 HOH HOH . H 4 HOH A 51 1051 114 HOH HOH . H 4 HOH A 52 1052 19 HOH HOH . H 4 HOH A 53 1053 171 HOH HOH . H 4 HOH A 54 1054 203 HOH HOH . H 4 HOH A 55 1055 286 HOH HOH . H 4 HOH A 56 1056 40 HOH HOH . H 4 HOH A 57 1057 214 HOH HOH . H 4 HOH A 58 1058 122 HOH HOH . H 4 HOH A 59 1059 96 HOH HOH . H 4 HOH A 60 1060 14 HOH HOH . H 4 HOH A 61 1061 116 HOH HOH . H 4 HOH A 62 1062 26 HOH HOH . H 4 HOH A 63 1063 167 HOH HOH . H 4 HOH A 64 1064 4 HOH HOH . H 4 HOH A 65 1065 118 HOH HOH . H 4 HOH A 66 1066 47 HOH HOH . H 4 HOH A 67 1067 258 HOH HOH . H 4 HOH A 68 1068 48 HOH HOH . H 4 HOH A 69 1069 49 HOH HOH . H 4 HOH A 70 1070 53 HOH HOH . H 4 HOH A 71 1071 125 HOH HOH . H 4 HOH A 72 1072 42 HOH HOH . H 4 HOH A 73 1073 31 HOH HOH . H 4 HOH A 74 1074 111 HOH HOH . H 4 HOH A 75 1075 148 HOH HOH . H 4 HOH A 76 1076 79 HOH HOH . H 4 HOH A 77 1077 29 HOH HOH . H 4 HOH A 78 1078 195 HOH HOH . H 4 HOH A 79 1079 50 HOH HOH . H 4 HOH A 80 1080 77 HOH HOH . H 4 HOH A 81 1081 228 HOH HOH . H 4 HOH A 82 1082 43 HOH HOH . H 4 HOH A 83 1083 18 HOH HOH . H 4 HOH A 84 1084 89 HOH HOH . H 4 HOH A 85 1085 13 HOH HOH . H 4 HOH A 86 1086 211 HOH HOH . H 4 HOH A 87 1087 279 HOH HOH . H 4 HOH A 88 1088 250 HOH HOH . H 4 HOH A 89 1089 134 HOH HOH . H 4 HOH A 90 1090 270 HOH HOH . H 4 HOH A 91 1091 276 HOH HOH . H 4 HOH A 92 1092 140 HOH HOH . H 4 HOH A 93 1093 95 HOH HOH . H 4 HOH A 94 1094 229 HOH HOH . H 4 HOH A 95 1095 30 HOH HOH . H 4 HOH A 96 1096 1 HOH HOH . H 4 HOH A 97 1097 78 HOH HOH . H 4 HOH A 98 1098 247 HOH HOH . H 4 HOH A 99 1099 230 HOH HOH . H 4 HOH A 100 1100 191 HOH HOH . H 4 HOH A 101 1101 142 HOH HOH . H 4 HOH A 102 1102 2 HOH HOH . H 4 HOH A 103 1103 9 HOH HOH . H 4 HOH A 104 1104 17 HOH HOH . H 4 HOH A 105 1105 235 HOH HOH . H 4 HOH A 106 1106 273 HOH HOH . H 4 HOH A 107 1107 7 HOH HOH . H 4 HOH A 108 1108 112 HOH HOH . H 4 HOH A 109 1109 93 HOH HOH . H 4 HOH A 110 1110 24 HOH HOH . H 4 HOH A 111 1111 263 HOH HOH . H 4 HOH A 112 1112 16 HOH HOH . H 4 HOH A 113 1113 3 HOH HOH . H 4 HOH A 114 1114 11 HOH HOH . H 4 HOH A 115 1115 219 HOH HOH . H 4 HOH A 116 1116 206 HOH HOH . H 4 HOH A 117 1117 146 HOH HOH . H 4 HOH A 118 1118 156 HOH HOH . H 4 HOH A 119 1119 5 HOH HOH . H 4 HOH A 120 1120 69 HOH HOH . H 4 HOH A 121 1121 175 HOH HOH . H 4 HOH A 122 1122 100 HOH HOH . H 4 HOH A 123 1123 8 HOH HOH . H 4 HOH A 124 1124 55 HOH HOH . H 4 HOH A 125 1125 223 HOH HOH . H 4 HOH A 126 1126 133 HOH HOH . H 4 HOH A 127 1127 21 HOH HOH . H 4 HOH A 128 1128 187 HOH HOH . H 4 HOH A 129 1129 104 HOH HOH . H 4 HOH A 130 1130 173 HOH HOH . H 4 HOH A 131 1131 71 HOH HOH . H 4 HOH A 132 1132 109 HOH HOH . H 4 HOH A 133 1133 199 HOH HOH . H 4 HOH A 134 1134 106 HOH HOH . H 4 HOH A 135 1135 85 HOH HOH . H 4 HOH A 136 1136 76 HOH HOH . H 4 HOH A 137 1137 92 HOH HOH . H 4 HOH A 138 1138 44 HOH HOH . H 4 HOH A 139 1139 282 HOH HOH . H 4 HOH A 140 1140 127 HOH HOH . H 4 HOH A 141 1141 232 HOH HOH . H 4 HOH A 142 1142 237 HOH HOH . H 4 HOH A 143 1143 144 HOH HOH . H 4 HOH A 144 1144 35 HOH HOH . H 4 HOH A 145 1145 113 HOH HOH . H 4 HOH A 146 1146 67 HOH HOH . H 4 HOH A 147 1147 185 HOH HOH . H 4 HOH A 148 1148 23 HOH HOH . H 4 HOH A 149 1149 98 HOH HOH . H 4 HOH A 150 1150 184 HOH HOH . H 4 HOH A 151 1151 216 HOH HOH . H 4 HOH A 152 1152 39 HOH HOH . H 4 HOH A 153 1153 208 HOH HOH . H 4 HOH A 154 1154 162 HOH HOH . H 4 HOH A 155 1155 82 HOH HOH . H 4 HOH A 156 1156 155 HOH HOH . H 4 HOH A 157 1157 227 HOH HOH . H 4 HOH A 158 1158 28 HOH HOH . H 4 HOH A 159 1159 281 HOH HOH . H 4 HOH A 160 1160 280 HOH HOH . H 4 HOH A 161 1161 65 HOH HOH . H 4 HOH A 162 1162 102 HOH HOH . H 4 HOH A 163 1163 241 HOH HOH . H 4 HOH A 164 1164 137 HOH HOH . H 4 HOH A 165 1165 68 HOH HOH . H 4 HOH A 166 1166 157 HOH HOH . H 4 HOH A 167 1167 91 HOH HOH . H 4 HOH A 168 1168 22 HOH HOH . H 4 HOH A 169 1169 12 HOH HOH . H 4 HOH A 170 1170 83 HOH HOH . H 4 HOH A 171 1171 138 HOH HOH . H 4 HOH A 172 1172 123 HOH HOH . H 4 HOH A 173 1173 170 HOH HOH . H 4 HOH A 174 1174 33 HOH HOH . H 4 HOH A 175 1175 90 HOH HOH . H 4 HOH A 176 1176 56 HOH HOH . H 4 HOH A 177 1177 176 HOH HOH . H 4 HOH A 178 1178 27 HOH HOH . H 4 HOH A 179 1179 169 HOH HOH . H 4 HOH A 180 1180 52 HOH HOH . H 4 HOH A 181 1181 207 HOH HOH . H 4 HOH A 182 1182 62 HOH HOH . H 4 HOH A 183 1183 20 HOH HOH . H 4 HOH A 184 1184 58 HOH HOH . H 4 HOH A 185 1185 283 HOH HOH . H 4 HOH A 186 1186 139 HOH HOH . H 4 HOH A 187 1187 200 HOH HOH . H 4 HOH A 188 1188 193 HOH HOH . H 4 HOH A 189 1189 75 HOH HOH . H 4 HOH A 190 1190 189 HOH HOH . H 4 HOH A 191 1191 15 HOH HOH . H 4 HOH A 192 1192 41 HOH HOH . H 4 HOH A 193 1193 253 HOH HOH . H 4 HOH A 194 1194 198 HOH HOH . H 4 HOH A 195 1195 150 HOH HOH . H 4 HOH A 196 1196 107 HOH HOH . H 4 HOH A 197 1197 94 HOH HOH . H 4 HOH A 198 1198 147 HOH HOH . H 4 HOH A 199 1199 236 HOH HOH . H 4 HOH A 200 1200 271 HOH HOH . H 4 HOH A 201 1201 267 HOH HOH . H 4 HOH A 202 1202 143 HOH HOH . H 4 HOH A 203 1203 272 HOH HOH . H 4 HOH A 204 1204 192 HOH HOH . H 4 HOH A 205 1205 164 HOH HOH . H 4 HOH A 206 1206 37 HOH HOH . H 4 HOH A 207 1207 34 HOH HOH . H 4 HOH A 208 1208 81 HOH HOH . H 4 HOH A 209 1209 6 HOH HOH . H 4 HOH A 210 1210 284 HOH HOH . H 4 HOH A 211 1211 178 HOH HOH . H 4 HOH A 212 1212 124 HOH HOH . H 4 HOH A 213 1213 177 HOH HOH . H 4 HOH A 214 1214 179 HOH HOH . H 4 HOH A 215 1215 254 HOH HOH . H 4 HOH A 216 1216 259 HOH HOH . H 4 HOH A 217 1217 126 HOH HOH . H 4 HOH A 218 1218 163 HOH HOH . H 4 HOH A 219 1219 255 HOH HOH . H 4 HOH A 220 1220 70 HOH HOH . H 4 HOH A 221 1221 99 HOH HOH . H 4 HOH A 222 1222 141 HOH HOH . H 4 HOH A 223 1223 151 HOH HOH . H 4 HOH A 224 1224 158 HOH HOH . H 4 HOH A 225 1225 244 HOH HOH . H 4 HOH A 226 1226 57 HOH HOH . H 4 HOH A 227 1227 120 HOH HOH . H 4 HOH A 228 1228 149 HOH HOH . H 4 HOH A 229 1229 234 HOH HOH . H 4 HOH A 230 1230 153 HOH HOH . H 4 HOH A 231 1231 154 HOH HOH . H 4 HOH A 232 1232 159 HOH HOH . H 4 HOH A 233 1233 180 HOH HOH . H 4 HOH A 234 1234 261 HOH HOH . H 4 HOH A 235 1235 278 HOH HOH . H 4 HOH A 236 1236 220 HOH HOH . H 4 HOH A 237 1237 238 HOH HOH . H 4 HOH A 238 1238 225 HOH HOH . H 4 HOH A 239 1239 135 HOH HOH . H 4 HOH A 240 1240 74 HOH HOH . H 4 HOH A 241 1241 204 HOH HOH . H 4 HOH A 242 1242 257 HOH HOH . H 4 HOH A 243 1243 243 HOH HOH . H 4 HOH A 244 1244 186 HOH HOH . H 4 HOH A 245 1245 131 HOH HOH . H 4 HOH A 246 1246 239 HOH HOH . H 4 HOH A 247 1247 119 HOH HOH . H 4 HOH A 248 1248 224 HOH HOH . H 4 HOH A 249 1249 145 HOH HOH . H 4 HOH A 250 1250 268 HOH HOH . H 4 HOH A 251 1251 128 HOH HOH . H 4 HOH A 252 1252 117 HOH HOH . H 4 HOH A 253 1253 217 HOH HOH . H 4 HOH A 254 1254 59 HOH HOH . H 4 HOH A 255 1255 226 HOH HOH . H 4 HOH A 256 1256 152 HOH HOH . H 4 HOH A 257 1257 218 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 GOL . . . F 3 15.944 -0.545 19.158 1 31.8 ? C1 GOL 905 A 1 HETATM 2 O O1 GOL . . . F 3 16.684 -1.453 19.898 1 38.44 ? O1 GOL 905 A 1 HETATM 3 C C2 GOL . . . F 3 14.445 -0.998 19.259 1 38.69 ? C2 GOL 905 A 1 HETATM 4 O O2 GOL . . . F 3 13.741 -0.306 20.228 1 50.35 ? O2 GOL 905 A 1 HETATM 5 C C3 GOL . . . F 3 13.831 -0.786 17.885 1 27.54 ? C3 GOL 905 A 1 HETATM 6 O O3 GOL . . . F 3 12.534 -1.231 17.937 1 56.55 ? O3 GOL 905 A 1 HETATM 7 H H11 GOL . . . F 3 16.21 -0.517 18.226 1 38.18 ? H11 GOL 905 A 1 HETATM 8 H H12 GOL . . . F 3 16.029 0.364 19.486 1 38.18 ? H12 GOL 905 A 1 HETATM 9 H HO1 GOL . . . F 3 16.318 -1.497 20.669 1 46.15 ? HO1 GOL 905 A 1 HETATM 10 H H2 GOL . . . F 3 14.424 -1.935 19.509 1 46.45 ? H2 GOL 905 A 1 HETATM 11 H HO2 GOL . . . F 3 12.915 -0.449 20.113 1 60.44 ? HO2 GOL 905 A 1 HETATM 12 H H31 GOL . . . F 3 14.37 -1.255 17.228 1 33.07 ? H31 GOL 905 A 1 HETATM 13 H H32 GOL . . . F 3 13.904 0.153 17.653 1 33.07 ? H32 GOL 905 A 1 # _model_server_stats.io_time_ms 35 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 15 _model_server_stats.query_time_ms 294 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 13 #