data_8BC5 # _model_server_result.job_id 2P14XAWijnhL2V3t86hiNg _model_server_result.datetime_utc '2024-12-02 14:09:30' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8bc5 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":301}' # _entry.id 8BC5 # _exptl.entry_id 8BC5 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 40.078 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CALCIUM ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 8BC5 _cell.length_a 53.481 _cell.length_b 53.481 _cell.length_c 105.248 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8BC5 _symmetry.cell_setting ? _symmetry.Int_Tables_number 154 _symmetry.space_group_name_Hall 'P 32 2"' _symmetry.space_group_name_H-M 'P 32 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 4_555 y,x,-z -0.5 0.866025 0 0.866025 0.5 0 0 0 -1 0 0 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 119 A CYS 119 1_555 A SG CYS 179 A CYS 179 1_665 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? covale ? covale1 A C PRO 103 A PRO 103 1_555 A N MSE 104 A MSE 104 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.333 ? covale ? covale2 A C MSE 104 A MSE 104 1_555 A N MSE 105 A MSE 105 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale3 A C MSE 105 A MSE 105 1_555 A N ASN 106 A ASN 106 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? covale ? covale4 A C SER 136 A SER 136 1_555 A N MSE 137 A MSE 137 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale5 A C MSE 137 A MSE 137 1_555 A N ILE 138 A ILE 138 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.335 ? metalc ? metalc1 A O ASP 140 A ASP 140 1_555 B CA CA . A CA 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.467 ? metalc ? metalc2 A OD1 ASP 140 A ASP 140 1_555 B CA CA . A CA 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.47 ? metalc ? metalc3 A OD1 ASN 143 A ASN 143 1_555 B CA CA . A CA 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.488 ? metalc ? metalc4 A O ASN 148 A ASN 148 1_555 B CA CA . A CA 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.34 ? metalc ? metalc5 B CA CA . A CA 301 1_555 C O HOH . A HOH 425 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.513 ? metalc ? metalc6 B CA CA . A CA 301 1_555 C O HOH . A HOH 435 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.638 ? # _chem_comp.formula 'Ca 2' _chem_comp.formula_weight 40.078 _chem_comp.id CA _chem_comp.mon_nstd_flag . _chem_comp.name 'CALCIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 8BC5 _atom_sites.fract_transf_matrix[1][1] 0.018698 _atom_sites.fract_transf_matrix[1][2] 0.010795 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.021591 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009501 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 CA A 1 301 1 CA CA . C 3 HOH A 1 401 89 HOH HOH . C 3 HOH A 2 402 6 HOH HOH . C 3 HOH A 3 403 15 HOH HOH . C 3 HOH A 4 404 52 HOH HOH . C 3 HOH A 5 405 57 HOH HOH . C 3 HOH A 6 406 31 HOH HOH . C 3 HOH A 7 407 27 HOH HOH . C 3 HOH A 8 408 63 HOH HOH . C 3 HOH A 9 409 106 HOH HOH . C 3 HOH A 10 410 65 HOH HOH . C 3 HOH A 11 411 50 HOH HOH . C 3 HOH A 12 412 11 HOH HOH . C 3 HOH A 13 413 104 HOH HOH . C 3 HOH A 14 414 28 HOH HOH . C 3 HOH A 15 415 80 HOH HOH . C 3 HOH A 16 416 45 HOH HOH . C 3 HOH A 17 417 61 HOH HOH . C 3 HOH A 18 418 21 HOH HOH . C 3 HOH A 19 419 74 HOH HOH . C 3 HOH A 20 420 19 HOH HOH . C 3 HOH A 21 421 49 HOH HOH . C 3 HOH A 22 422 83 HOH HOH . C 3 HOH A 23 423 20 HOH HOH . C 3 HOH A 24 424 60 HOH HOH . C 3 HOH A 25 425 18 HOH HOH . C 3 HOH A 26 426 2 HOH HOH . C 3 HOH A 27 427 91 HOH HOH . C 3 HOH A 28 428 10 HOH HOH . C 3 HOH A 29 429 70 HOH HOH . C 3 HOH A 30 430 25 HOH HOH . C 3 HOH A 31 431 12 HOH HOH . C 3 HOH A 32 432 55 HOH HOH . C 3 HOH A 33 433 29 HOH HOH . C 3 HOH A 34 434 46 HOH HOH . C 3 HOH A 35 435 17 HOH HOH . C 3 HOH A 36 436 73 HOH HOH . C 3 HOH A 37 437 30 HOH HOH . C 3 HOH A 38 438 84 HOH HOH . C 3 HOH A 39 439 8 HOH HOH . C 3 HOH A 40 440 102 HOH HOH . C 3 HOH A 41 441 79 HOH HOH . C 3 HOH A 42 442 64 HOH HOH . C 3 HOH A 43 443 1 HOH HOH . C 3 HOH A 44 444 33 HOH HOH . C 3 HOH A 45 445 75 HOH HOH . C 3 HOH A 46 446 34 HOH HOH . C 3 HOH A 47 447 48 HOH HOH . C 3 HOH A 48 448 13 HOH HOH . C 3 HOH A 49 449 3 HOH HOH . C 3 HOH A 50 450 14 HOH HOH . C 3 HOH A 51 451 39 HOH HOH . C 3 HOH A 52 452 38 HOH HOH . C 3 HOH A 53 453 22 HOH HOH . C 3 HOH A 54 454 47 HOH HOH . C 3 HOH A 55 455 58 HOH HOH . C 3 HOH A 56 456 35 HOH HOH . C 3 HOH A 57 457 43 HOH HOH . C 3 HOH A 58 458 76 HOH HOH . C 3 HOH A 59 459 42 HOH HOH . C 3 HOH A 60 460 56 HOH HOH . C 3 HOH A 61 461 9 HOH HOH . C 3 HOH A 62 462 7 HOH HOH . C 3 HOH A 63 463 62 HOH HOH . C 3 HOH A 64 464 72 HOH HOH . C 3 HOH A 65 465 5 HOH HOH . C 3 HOH A 66 466 51 HOH HOH . C 3 HOH A 67 467 77 HOH HOH . C 3 HOH A 68 468 37 HOH HOH . C 3 HOH A 69 469 16 HOH HOH . C 3 HOH A 70 470 32 HOH HOH . C 3 HOH A 71 471 54 HOH HOH . C 3 HOH A 72 472 40 HOH HOH . C 3 HOH A 73 473 85 HOH HOH . C 3 HOH A 74 474 44 HOH HOH . C 3 HOH A 75 475 41 HOH HOH . C 3 HOH A 76 476 26 HOH HOH . C 3 HOH A 77 477 24 HOH HOH . C 3 HOH A 78 478 66 HOH HOH . C 3 HOH A 79 479 4 HOH HOH . C 3 HOH A 80 480 59 HOH HOH . C 3 HOH A 81 481 69 HOH HOH . C 3 HOH A 82 482 53 HOH HOH . C 3 HOH A 83 483 86 HOH HOH . C 3 HOH A 84 484 68 HOH HOH . C 3 HOH A 85 485 82 HOH HOH . C 3 HOH A 86 486 88 HOH HOH . C 3 HOH A 87 487 71 HOH HOH . C 3 HOH A 88 488 36 HOH HOH . C 3 HOH A 89 489 23 HOH HOH . C 3 HOH A 90 491 67 HOH HOH . C 3 HOH A 91 492 93 HOH HOH . C 3 HOH A 92 493 101 HOH HOH . C 3 HOH A 93 494 94 HOH HOH . C 3 HOH A 94 495 100 HOH HOH . C 3 HOH A 95 496 78 HOH HOH . C 3 HOH A 96 497 98 HOH HOH . C 3 HOH A 97 498 90 HOH HOH . C 3 HOH A 98 499 99 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol CA _atom_site.label_atom_id CA _atom_site.label_comp_id CA _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id B _atom_site.label_entity_id 2 _atom_site.Cartn_x 17.68 _atom_site.Cartn_y 7.431 _atom_site.Cartn_z -12.945 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 16.9 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id CA _atom_site.auth_comp_id CA _atom_site.auth_seq_id 301 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 46 _model_server_stats.parse_time_ms 23 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 277 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 1 #