data_8BE0 # _model_server_result.job_id IAXFSnjy4Y5dXPNmzu8mag _model_server_result.datetime_utc '2024-10-10 04:20:46' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8be0 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"H","auth_seq_id":802}' # _entry.id 8BE0 # _exptl.entry_id 8BE0 _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 24.305 _entity.id 7 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MAGNESIUM ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 8BE0 _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 8BE0 _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details hexameric _pdbx_struct_assembly.oligomeric_count 6 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 7 G N N ? 7 H N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 F P A 1 M A 2 1_555 I O3B GTA . M GTA 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.601 ? covale ? covale2 F O3' C 15 M C 16 1_555 F P K1F 16 M K1F 17 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.605 ? covale ? covale3 F O3' K1F 16 M K1F 17 1_555 F P U 17 M U 18 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.604 ? covale ? covale4 F O3' C 18 M C 19 1_555 F P K1F 19 M K1F 20 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.606 ? covale ? covale5 F O3' K1F 19 M K1F 20 1_555 F P K1F 20 M K1F 21 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.607 ? metalc ? metalc1 B O GLY 313 B GLY 304 1_555 H MG MG . B MG 802 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.748 ? metalc ? metalc2 B OD1 ASP 314 B ASP 305 1_555 G MG MG . B MG 801 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.215 ? metalc ? metalc3 B OD1 ASP 453 B ASP 444 1_555 G MG MG . B MG 801 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.444 ? metalc ? metalc4 B OD2 ASP 453 B ASP 444 1_555 G MG MG . B MG 801 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.744 ? metalc ? metalc5 B OD1 ASP 454 B ASP 445 1_555 H MG MG . B MG 802 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.611 ? metalc ? metalc6 B OD2 ASP 454 B ASP 445 1_555 H MG MG . B MG 802 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.978 ? metalc ? metalc7 G MG MG . B MG 801 1_555 F OP1 K1F 16 M K1F 17 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.08 ? hydrog WATSON-CRICK hydrog1 E N1 G 13 R G 11 1_555 F N3 C 15 M C 16 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog2 E N2 G 13 R G 11 1_555 F O2 C 15 M C 16 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog3 E O6 G 13 R G 11 1_555 F N4 C 15 M C 16 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog4 E N1 A 14 R A 12 1_555 F N3 U 14 M U 15 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog5 E N6 A 14 R A 12 1_555 F O4 U 14 M U 15 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog6 E N1 G 15 R G 13 1_555 F N3 C 13 M C 14 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog7 E N2 G 15 R G 13 1_555 F O2 C 13 M C 14 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog8 E O6 G 15 R G 13 1_555 F N4 C 13 M C 14 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog9 E N1 G 16 R G 14 1_555 F N3 C 12 M C 13 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog10 E N2 G 16 R G 14 1_555 F O2 C 12 M C 13 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog11 E O6 G 16 R G 14 1_555 F N4 C 12 M C 13 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog12 E N3 C 17 R C 15 1_555 F N1 G 11 M G 12 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog13 E N4 C 17 R C 15 1_555 F O6 G 11 M G 12 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog14 E O2 C 17 R C 15 1_555 F N2 G 11 M G 12 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog15 E N3 U 18 R U 16 1_555 F N1 A 10 M A 11 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog16 E O4 U 18 R U 16 1_555 F N6 A 10 M A 11 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog17 E N1 A 19 R A 17 1_555 F N3 U 9 M U 10 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog18 E N6 A 19 R A 17 1_555 F O4 U 9 M U 10 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog19 E N3 U 20 R U 18 1_555 F N1 A 8 M A 9 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog20 E O4 U 20 R U 18 1_555 F N6 A 8 M A 9 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog21 E N3 U 21 R U 19 1_555 F N1 A 7 M A 8 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog22 E O4 U 21 R U 19 1_555 F N6 A 7 M A 8 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog 'A-A MISPAIR' hydrog23 D N6 A 1 V A 1 1_555 D N3 A 10 V A 10 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog24 D N1 G 2 V G 2 1_555 D N3 C 9 V C 9 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog25 D N2 G 2 V G 2 1_555 D O2 C 9 V C 9 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog26 D O6 G 2 V G 2 1_555 D N4 C 9 V C 9 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog27 D N3 U 3 V U 3 1_555 D N1 A 8 V A 8 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog28 D O4 U 3 V U 3 1_555 D N6 A 8 V A 8 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog 'A-A MISPAIR' hydrog29 D N3 A 4 V A 4 1_555 D N6 A 7 V A 7 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? # _chem_comp.formula 'Mg 2' _chem_comp.formula_weight 24.305 _chem_comp.id MG _chem_comp.mon_nstd_flag . _chem_comp.name 'MAGNESIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 8BE0 _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code G 7 MG B 1 801 5 MG MG . H 7 MG B 1 802 6 MG MG . I 8 GTA M 1 101 1 GTA ADM . J 9 HOH A 1 801 22 HOH HOH . J 9 HOH A 2 802 7 HOH HOH . J 9 HOH A 3 803 25 HOH HOH . J 9 HOH A 4 804 17 HOH HOH . J 9 HOH A 5 805 23 HOH HOH . J 9 HOH A 6 806 18 HOH HOH . J 9 HOH A 7 807 31 HOH HOH . J 9 HOH A 8 808 24 HOH HOH . J 9 HOH A 9 809 33 HOH HOH . J 9 HOH A 10 810 64 HOH HOH . J 9 HOH A 11 811 74 HOH HOH . J 9 HOH A 12 812 32 HOH HOH . J 9 HOH A 13 813 57 HOH HOH . J 9 HOH A 14 814 58 HOH HOH . J 9 HOH A 15 815 73 HOH HOH . J 9 HOH A 16 816 21 HOH HOH . J 9 HOH A 17 817 19 HOH HOH . J 9 HOH A 18 818 6 HOH HOH . J 9 HOH A 19 819 55 HOH HOH . J 9 HOH A 20 820 62 HOH HOH . J 9 HOH A 21 821 30 HOH HOH . J 9 HOH A 22 822 9 HOH HOH . J 9 HOH A 23 823 56 HOH HOH . J 9 HOH A 24 824 54 HOH HOH . J 9 HOH A 25 825 4 HOH HOH . J 9 HOH A 26 826 1 HOH HOH . J 9 HOH A 27 827 26 HOH HOH . J 9 HOH A 28 828 2 HOH HOH . J 9 HOH A 29 829 34 HOH HOH . J 9 HOH A 30 830 29 HOH HOH . J 9 HOH A 31 831 8 HOH HOH . J 9 HOH A 32 832 65 HOH HOH . J 9 HOH A 33 833 80 HOH HOH . K 9 HOH B 1 901 38 HOH HOH . K 9 HOH B 2 902 43 HOH HOH . K 9 HOH B 3 903 93 HOH HOH . K 9 HOH B 4 904 41 HOH HOH . K 9 HOH B 5 905 60 HOH HOH . K 9 HOH B 6 906 47 HOH HOH . K 9 HOH B 7 907 89 HOH HOH . K 9 HOH B 8 908 67 HOH HOH . K 9 HOH B 9 909 91 HOH HOH . K 9 HOH B 10 910 92 HOH HOH . K 9 HOH B 11 911 72 HOH HOH . K 9 HOH B 12 912 61 HOH HOH . K 9 HOH B 13 913 28 HOH HOH . K 9 HOH B 14 914 66 HOH HOH . K 9 HOH B 15 915 48 HOH HOH . K 9 HOH B 16 916 53 HOH HOH . K 9 HOH B 17 917 49 HOH HOH . K 9 HOH B 18 918 87 HOH HOH . K 9 HOH B 19 919 51 HOH HOH . K 9 HOH B 20 920 46 HOH HOH . K 9 HOH B 21 921 50 HOH HOH . K 9 HOH B 22 922 42 HOH HOH . K 9 HOH B 23 923 40 HOH HOH . K 9 HOH B 24 924 52 HOH HOH . K 9 HOH B 25 925 69 HOH HOH . K 9 HOH B 26 926 90 HOH HOH . K 9 HOH B 27 927 71 HOH HOH . K 9 HOH B 28 928 95 HOH HOH . K 9 HOH B 29 929 68 HOH HOH . K 9 HOH B 30 930 45 HOH HOH . K 9 HOH B 31 931 70 HOH HOH . K 9 HOH B 32 932 44 HOH HOH . K 9 HOH B 33 933 59 HOH HOH . K 9 HOH B 34 934 37 HOH HOH . K 9 HOH B 35 935 3 HOH HOH . K 9 HOH B 36 936 86 HOH HOH . L 9 HOH C 1 801 39 HOH HOH . L 9 HOH C 2 802 84 HOH HOH . L 9 HOH C 3 803 82 HOH HOH . L 9 HOH C 4 804 81 HOH HOH . L 9 HOH C 5 805 85 HOH HOH . L 9 HOH C 6 806 94 HOH HOH . L 9 HOH C 7 807 83 HOH HOH . M 9 HOH V 1 101 75 HOH HOH . M 9 HOH V 2 102 76 HOH HOH . M 9 HOH V 3 103 79 HOH HOH . M 9 HOH V 4 104 5 HOH HOH . M 9 HOH V 5 105 35 HOH HOH . M 9 HOH V 6 106 27 HOH HOH . M 9 HOH V 7 107 63 HOH HOH . M 9 HOH V 8 108 20 HOH HOH . M 9 HOH V 9 109 10 HOH HOH . M 9 HOH V 10 110 77 HOH HOH . M 9 HOH V 11 111 78 HOH HOH . M 9 HOH V 12 112 36 HOH HOH . N 9 HOH R 1 101 16 HOH HOH . N 9 HOH R 2 102 11 HOH HOH . N 9 HOH R 3 103 15 HOH HOH . N 9 HOH R 4 104 13 HOH HOH . N 9 HOH R 5 105 14 HOH HOH . O 9 HOH M 1 201 12 HOH HOH . O 9 HOH M 2 202 88 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol MG _atom_site.label_atom_id MG _atom_site.label_comp_id MG _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id H _atom_site.label_entity_id 7 _atom_site.Cartn_x 136.258 _atom_site.Cartn_y 144.287 _atom_site.Cartn_z 154.075 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 27.42 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id MG _atom_site.auth_comp_id MG _atom_site.auth_seq_id 802 _atom_site.auth_asym_id B _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 105 _model_server_stats.parse_time_ms 24 _model_server_stats.create_model_time_ms 26 _model_server_stats.query_time_ms 554 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 1 #