data_8BE8 # _model_server_result.job_id w_srhJ1hc5NlGnFZGoa_Kg _model_server_result.datetime_utc '2024-11-02 04:21:56' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8be8 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"H","auth_seq_id":205}' # _entry.id 8BE8 # _exptl.entry_id 8BE8 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 46.025 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'FORMIC ACID' _entity.pdbx_number_of_molecules 8 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 8BE8 _cell.length_a 150.06 _cell.length_b 150.06 _cell.length_c 202.25 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8BE8 _symmetry.cell_setting ? _symmetry.Int_Tables_number 97 _symmetry.space_group_name_Hall 'I 4 2' _symmetry.space_group_name_H-M 'I 4 2 2' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 D N N ? 4 E N N ? 4 F N N ? 4 G N N ? 4 H N N ? 4 I N N ? 4 J N N ? 4 K N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 C C LYS 1 P LYS 1 1_555 C N HRG 2 P HRG 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.49 ? covale ? covale2 C NZ LYS 1 P LYS 1 1_555 C CG XSN 9 P XSN 9 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.482 ? covale ? covale3 C C HRG 2 P HRG 2 1_555 C N HIS 3 P HIS 3 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.482 ? covale ? covale4 C C ALA 8 P ALA 8 1_555 C N XSN 9 P XSN 9 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.476 ? # _chem_comp.formula 'C H2 O2' _chem_comp.formula_weight 46.025 _chem_comp.id FMT _chem_comp.mon_nstd_flag . _chem_comp.name 'FORMIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C O1 FMT doub 83 n n C O2 FMT sing 84 n n C H FMT sing 85 n n O2 HO2 FMT sing 86 n n # _atom_sites.entry_id 8BE8 _atom_sites.fract_transf_matrix[1][1] 0.006664 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.006664 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.004944 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code D 4 FMT R 1 201 1 FMT FMT . E 4 FMT R 1 202 2 FMT FMT . F 4 FMT R 1 203 3 FMT FMT . G 4 FMT R 1 204 4 FMT FMT . H 4 FMT R 1 205 5 FMT FMT . I 4 FMT R 1 206 6 FMT FMT . J 4 FMT S 1 1101 7 FMT FMT . K 4 FMT S 1 1102 8 FMT FMT . L 5 HOH R 1 301 164 HOH HOH . L 5 HOH R 2 302 34 HOH HOH . L 5 HOH R 3 303 144 HOH HOH . L 5 HOH R 4 304 124 HOH HOH . L 5 HOH R 5 305 97 HOH HOH . L 5 HOH R 6 306 165 HOH HOH . L 5 HOH R 7 307 66 HOH HOH . L 5 HOH R 8 308 55 HOH HOH . L 5 HOH R 9 309 18 HOH HOH . L 5 HOH R 10 310 67 HOH HOH . L 5 HOH R 11 311 20 HOH HOH . L 5 HOH R 12 312 28 HOH HOH . L 5 HOH R 13 313 174 HOH HOH . L 5 HOH R 14 314 64 HOH HOH . L 5 HOH R 15 315 201 HOH HOH . L 5 HOH R 16 316 11 HOH HOH . L 5 HOH R 17 317 7 HOH HOH . L 5 HOH R 18 318 33 HOH HOH . L 5 HOH R 19 319 39 HOH HOH . L 5 HOH R 20 320 123 HOH HOH . L 5 HOH R 21 321 24 HOH HOH . L 5 HOH R 22 322 21 HOH HOH . L 5 HOH R 23 323 108 HOH HOH . L 5 HOH R 24 324 57 HOH HOH . L 5 HOH R 25 325 59 HOH HOH . L 5 HOH R 26 326 190 HOH HOH . L 5 HOH R 27 327 58 HOH HOH . L 5 HOH R 28 328 13 HOH HOH . L 5 HOH R 29 329 197 HOH HOH . L 5 HOH R 30 330 159 HOH HOH . L 5 HOH R 31 331 138 HOH HOH . L 5 HOH R 32 332 3 HOH HOH . L 5 HOH R 33 333 35 HOH HOH . L 5 HOH R 34 334 44 HOH HOH . L 5 HOH R 35 335 53 HOH HOH . L 5 HOH R 36 336 46 HOH HOH . L 5 HOH R 37 337 86 HOH HOH . L 5 HOH R 38 338 154 HOH HOH . L 5 HOH R 39 339 90 HOH HOH . L 5 HOH R 40 340 19 HOH HOH . L 5 HOH R 41 341 128 HOH HOH . L 5 HOH R 42 342 76 HOH HOH . L 5 HOH R 43 343 56 HOH HOH . L 5 HOH R 44 344 158 HOH HOH . L 5 HOH R 45 345 48 HOH HOH . L 5 HOH R 46 346 17 HOH HOH . L 5 HOH R 47 347 36 HOH HOH . L 5 HOH R 48 348 45 HOH HOH . L 5 HOH R 49 349 187 HOH HOH . L 5 HOH R 50 350 26 HOH HOH . L 5 HOH R 51 351 38 HOH HOH . L 5 HOH R 52 352 101 HOH HOH . L 5 HOH R 53 353 192 HOH HOH . L 5 HOH R 54 354 4 HOH HOH . L 5 HOH R 55 355 176 HOH HOH . L 5 HOH R 56 356 167 HOH HOH . L 5 HOH R 57 357 137 HOH HOH . L 5 HOH R 58 358 91 HOH HOH . L 5 HOH R 59 359 112 HOH HOH . M 5 HOH S 1 1201 171 HOH HOH . M 5 HOH S 2 1202 49 HOH HOH . M 5 HOH S 3 1203 41 HOH HOH . M 5 HOH S 4 1204 14 HOH HOH . M 5 HOH S 5 1205 118 HOH HOH . M 5 HOH S 6 1206 79 HOH HOH . M 5 HOH S 7 1207 15 HOH HOH . M 5 HOH S 8 1208 31 HOH HOH . M 5 HOH S 9 1209 52 HOH HOH . M 5 HOH S 10 1210 16 HOH HOH . M 5 HOH S 11 1211 173 HOH HOH . M 5 HOH S 12 1212 54 HOH HOH . M 5 HOH S 13 1213 23 HOH HOH . M 5 HOH S 14 1214 78 HOH HOH . M 5 HOH S 15 1215 85 HOH HOH . M 5 HOH S 16 1216 83 HOH HOH . M 5 HOH S 17 1217 188 HOH HOH . M 5 HOH S 18 1218 94 HOH HOH . M 5 HOH S 19 1219 180 HOH HOH . M 5 HOH S 20 1220 163 HOH HOH . M 5 HOH S 21 1221 142 HOH HOH . M 5 HOH S 22 1222 93 HOH HOH . M 5 HOH S 23 1223 102 HOH HOH . M 5 HOH S 24 1224 191 HOH HOH . M 5 HOH S 25 1225 40 HOH HOH . M 5 HOH S 26 1226 73 HOH HOH . M 5 HOH S 27 1227 132 HOH HOH . M 5 HOH S 28 1228 29 HOH HOH . M 5 HOH S 29 1229 63 HOH HOH . M 5 HOH S 30 1230 75 HOH HOH . M 5 HOH S 31 1231 71 HOH HOH . M 5 HOH S 32 1232 119 HOH HOH . M 5 HOH S 33 1233 153 HOH HOH . M 5 HOH S 34 1234 162 HOH HOH . M 5 HOH S 35 1235 157 HOH HOH . M 5 HOH S 36 1236 127 HOH HOH . M 5 HOH S 37 1237 115 HOH HOH . M 5 HOH S 38 1238 168 HOH HOH . M 5 HOH S 39 1239 149 HOH HOH . M 5 HOH S 40 1240 182 HOH HOH . M 5 HOH S 41 1241 99 HOH HOH . M 5 HOH S 42 1242 43 HOH HOH . M 5 HOH S 43 1243 51 HOH HOH . M 5 HOH S 44 1244 166 HOH HOH . M 5 HOH S 45 1245 134 HOH HOH . M 5 HOH S 46 1246 62 HOH HOH . M 5 HOH S 47 1247 126 HOH HOH . M 5 HOH S 48 1248 72 HOH HOH . M 5 HOH S 49 1249 130 HOH HOH . M 5 HOH S 50 1250 10 HOH HOH . M 5 HOH S 51 1251 65 HOH HOH . M 5 HOH S 52 1252 42 HOH HOH . M 5 HOH S 53 1253 77 HOH HOH . M 5 HOH S 54 1254 183 HOH HOH . M 5 HOH S 55 1255 111 HOH HOH . M 5 HOH S 56 1256 143 HOH HOH . M 5 HOH S 57 1257 89 HOH HOH . M 5 HOH S 58 1258 5 HOH HOH . M 5 HOH S 59 1259 8 HOH HOH . M 5 HOH S 60 1260 37 HOH HOH . M 5 HOH S 61 1261 121 HOH HOH . M 5 HOH S 62 1262 80 HOH HOH . M 5 HOH S 63 1263 170 HOH HOH . M 5 HOH S 64 1264 160 HOH HOH . M 5 HOH S 65 1265 61 HOH HOH . M 5 HOH S 66 1266 6 HOH HOH . M 5 HOH S 67 1267 84 HOH HOH . M 5 HOH S 68 1268 27 HOH HOH . M 5 HOH S 69 1269 70 HOH HOH . M 5 HOH S 70 1270 1 HOH HOH . M 5 HOH S 71 1271 147 HOH HOH . M 5 HOH S 72 1272 135 HOH HOH . M 5 HOH S 73 1273 2 HOH HOH . M 5 HOH S 74 1274 9 HOH HOH . M 5 HOH S 75 1275 81 HOH HOH . M 5 HOH S 76 1276 32 HOH HOH . M 5 HOH S 77 1277 109 HOH HOH . M 5 HOH S 78 1278 104 HOH HOH . M 5 HOH S 79 1279 151 HOH HOH . M 5 HOH S 80 1280 30 HOH HOH . M 5 HOH S 81 1281 114 HOH HOH . M 5 HOH S 82 1282 189 HOH HOH . M 5 HOH S 83 1283 92 HOH HOH . M 5 HOH S 84 1284 196 HOH HOH . M 5 HOH S 85 1285 22 HOH HOH . M 5 HOH S 86 1286 96 HOH HOH . M 5 HOH S 87 1287 133 HOH HOH . M 5 HOH S 88 1288 12 HOH HOH . M 5 HOH S 89 1289 82 HOH HOH . M 5 HOH S 90 1290 195 HOH HOH . M 5 HOH S 91 1291 175 HOH HOH . M 5 HOH S 92 1292 103 HOH HOH . M 5 HOH S 93 1293 107 HOH HOH . M 5 HOH S 94 1294 50 HOH HOH . M 5 HOH S 95 1295 88 HOH HOH . M 5 HOH S 96 1296 172 HOH HOH . M 5 HOH S 97 1297 69 HOH HOH . M 5 HOH S 98 1298 25 HOH HOH . M 5 HOH S 99 1299 125 HOH HOH . M 5 HOH S 100 1300 156 HOH HOH . M 5 HOH S 101 1301 116 HOH HOH . M 5 HOH S 102 1302 148 HOH HOH . M 5 HOH S 103 1303 100 HOH HOH . M 5 HOH S 104 1304 98 HOH HOH . M 5 HOH S 105 1305 117 HOH HOH . M 5 HOH S 106 1306 185 HOH HOH . M 5 HOH S 107 1307 186 HOH HOH . M 5 HOH S 108 1308 161 HOH HOH . M 5 HOH S 109 1309 211 HOH HOH . M 5 HOH S 110 1310 140 HOH HOH . M 5 HOH S 111 1311 155 HOH HOH . M 5 HOH S 112 1312 47 HOH HOH . M 5 HOH S 113 1313 184 HOH HOH . M 5 HOH S 114 1314 120 HOH HOH . M 5 HOH S 115 1315 131 HOH HOH . M 5 HOH S 116 1316 122 HOH HOH . M 5 HOH S 117 1317 87 HOH HOH . M 5 HOH S 118 1318 194 HOH HOH . M 5 HOH S 119 1319 60 HOH HOH . M 5 HOH S 120 1320 145 HOH HOH . M 5 HOH S 121 1321 74 HOH HOH . M 5 HOH S 122 1322 95 HOH HOH . M 5 HOH S 123 1323 213 HOH HOH . M 5 HOH S 124 1324 105 HOH HOH . M 5 HOH S 125 1325 68 HOH HOH . M 5 HOH S 126 1326 110 HOH HOH . M 5 HOH S 127 1327 106 HOH HOH . M 5 HOH S 128 1328 141 HOH HOH . M 5 HOH S 129 1329 150 HOH HOH . M 5 HOH S 130 1330 202 HOH HOH . M 5 HOH S 131 1331 129 HOH HOH . M 5 HOH S 132 1332 136 HOH HOH . M 5 HOH S 133 1333 139 HOH HOH . M 5 HOH S 134 1334 113 HOH HOH . M 5 HOH S 135 1335 169 HOH HOH . M 5 HOH S 136 1336 146 HOH HOH . N 5 HOH P 1 101 214 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C FMT . . . H 4 -25.447 18.371 -35.518 1 68.07 ? C FMT 205 R 1 HETATM 2 O O1 FMT . . . H 4 -26.588 18.034 -35.995 1 62.77 -1 O1 FMT 205 R 1 HETATM 3 O O2 FMT . . . H 4 -24.587 17.517 -35.117 1 59.69 ? O2 FMT 205 R 1 HETATM 4 H H FMT . . . H 4 -25.237 19.275 -35.463 1 81.73 ? H FMT 205 R 1 # _model_server_stats.io_time_ms 12 _model_server_stats.parse_time_ms 19 _model_server_stats.create_model_time_ms 19 _model_server_stats.query_time_ms 289 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 4 #