data_8BEM # _model_server_result.job_id Tzup3ZoHdmiwvo_Ew_G5hA _model_server_result.datetime_utc '2024-11-30 08:56:43' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8bem # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":402}' # _entry.id 8BEM # _exptl.entry_id 8BEM _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 96.063 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'SULFATE ION' _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 95.32 _cell.angle_gamma 90 _cell.entry_id 8BEM _cell.length_a 58.012 _cell.length_b 107.28 _cell.length_c 129.4 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8BEM _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA dimeric 2 software_defined_assembly 1 PISA dimeric 2 software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,D,E,F,J,K,L,O 1 1 B,C,G,H,I,M,N 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 F N N ? 3 I N N ? 3 K N N # _chem_comp.formula 'O4 S -2' _chem_comp.formula_weight 96.063 _chem_comp.id SO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'SULFATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag S O1 SO4 doub 344 n n S O2 SO4 doub 345 n n S O3 SO4 sing 346 n n S O4 SO4 sing 347 n n # _atom_sites.entry_id 8BEM _atom_sites.fract_transf_matrix[1][1] 0.017238 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.001605 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009321 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007761 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 AV9 A 1 401 1 AV9 AV9 . F 3 SO4 A 1 402 2 SO4 SO4 . G 2 AV9 B 1 401 1 AV9 AV9 . H 2 AV9 D 1 401 1 AV9 AV9 . I 3 SO4 D 1 402 1 SO4 SO4 . J 2 AV9 G 1 401 1 AV9 AV9 . K 3 SO4 G 1 402 3 SO4 SO4 . L 4 HOH A 1 501 26 HOH HOH . L 4 HOH A 2 502 9 HOH HOH . L 4 HOH A 3 503 4 HOH HOH . L 4 HOH A 4 504 2 HOH HOH . L 4 HOH A 5 505 22 HOH HOH . L 4 HOH A 6 506 7 HOH HOH . L 4 HOH A 7 507 32 HOH HOH . L 4 HOH A 8 508 18 HOH HOH . L 4 HOH A 9 509 28 HOH HOH . L 4 HOH A 10 510 3 HOH HOH . M 4 HOH B 1 501 8 HOH HOH . M 4 HOH B 2 502 29 HOH HOH . M 4 HOH B 3 503 10 HOH HOH . M 4 HOH B 4 504 25 HOH HOH . M 4 HOH B 5 505 11 HOH HOH . M 4 HOH B 6 506 1 HOH HOH . M 4 HOH B 7 507 6 HOH HOH . M 4 HOH B 8 508 33 HOH HOH . M 4 HOH B 9 509 24 HOH HOH . N 4 HOH D 1 501 30 HOH HOH . N 4 HOH D 2 502 27 HOH HOH . N 4 HOH D 3 503 21 HOH HOH . O 4 HOH G 1 501 31 HOH HOH . O 4 HOH G 2 502 16 HOH HOH . O 4 HOH G 3 503 15 HOH HOH . O 4 HOH G 4 504 19 HOH HOH . O 4 HOH G 5 505 5 HOH HOH . O 4 HOH G 6 506 12 HOH HOH . O 4 HOH G 7 507 20 HOH HOH . O 4 HOH G 8 508 13 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 S S SO4 . . . F 3 40.167 -5.891 -22.635 1 92.72 ? S SO4 402 A 1 HETATM 2 O O1 SO4 . . . F 3 41.508 -5.424 -22.973 1 68.61 ? O1 SO4 402 A 1 HETATM 3 O O2 SO4 . . . F 3 39.33 -6.08 -23.815 1 62.69 ? O2 SO4 402 A 1 HETATM 4 O O3 SO4 . . . F 3 40.316 -7.169 -21.951 1 71.44 ? O3 SO4 402 A 1 HETATM 5 O O4 SO4 . . . F 3 39.516 -4.893 -21.793 1 75.26 ? O4 SO4 402 A 1 # _model_server_stats.io_time_ms 23 _model_server_stats.parse_time_ms 13 _model_server_stats.create_model_time_ms 10 _model_server_stats.query_time_ms 267 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 5 #