data_8BHG # _model_server_result.job_id 63FaCDNCH3UptGJCg4Y25g _model_server_result.datetime_utc '2024-11-29 02:57:54' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8bhg # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":501}' # _entry.id 8BHG # _exptl.entry_id 8BHG _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 418.284 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description Bretazenil _entity.pdbx_number_of_molecules 5 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 106.06 _cell.angle_gamma 90 _cell.entry_id 8BHG _cell.length_a 81.14 _cell.length_b 137.637 _cell.length_c 113.351 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8BHG _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall 'P 2yb' _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details pentameric _pdbx_struct_assembly.oligomeric_count 5 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA,CA _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 F N N ? 3 J N N ? 3 K N N ? 3 S N N ? 3 T N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 142 A CYS 142 1_555 A SG CYS 156 A CYS 156 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? disulf ? disulf2 B SG CYS 151 B CYS 151 1_555 B SG CYS 165 B CYS 165 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? disulf ? disulf3 C SG CYS 142 C CYS 142 1_555 C SG CYS 156 C CYS 156 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? disulf ? disulf4 D SG CYS 142 D CYS 142 1_555 D SG CYS 156 D CYS 156 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.035 ? disulf ? disulf5 E SG CYS 142 E CYS 142 1_555 E SG CYS 156 E CYS 156 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.027 ? covale ? covale1 A ND2 ASN 205 A ASN 205 1_555 I C1 NAG . A NAG 504 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.361 ? covale ? covale2 B ND2 ASN 90 B ASN 90 1_555 O C1 NAG . B NAG 506 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.361 ? covale ? covale3 B ND2 ASN 208 B ASN 208 1_555 N C1 NAG . B NAG 505 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.524 ? covale ? covale4 C ND2 ASN 205 C ASN 205 1_555 R C1 NAG . C NAG 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.471 ? covale ? covale5 D ND2 ASN 205 D ASN 205 1_555 V C1 NAG . D NAG 504 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.512 ? covale ? covale6 E ND2 ASN 205 E ASN 205 1_555 X C1 NAG . E NAG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.405 ? # _chem_comp.formula 'C19 H20 Br N3 O3' _chem_comp.formula_weight 418.284 _chem_comp.id QMU _chem_comp.mon_nstd_flag . _chem_comp.name Bretazenil _chem_comp.type non-polymer _chem_comp.pdbx_synonyms '~{tert}-butyl (7~{S})-14-bromanyl-12-oxidanylidene-2,4,11-triazatetracyclo[11.4.0.0^{2,6}.0^{7,11}]heptadeca-1(17),3,5,13,15-pentaene-5-carboxylate' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O1 C4 QMU doub 386 n n C15 C16 QMU doub 387 n y C15 C13 QMU sing 388 n y C16 C17 QMU sing 389 n y N2 C14 QMU doub 390 n y N2 C5 QMU sing 391 n y C14 N1 QMU sing 392 n y C C1 QMU sing 393 n n C4 C5 QMU sing 394 n n C4 O QMU sing 395 n n C5 C6 QMU doub 396 n y N1 C13 QMU sing 397 n n N1 C6 QMU sing 398 n y C13 C12 QMU doub 399 n y C6 C7 QMU sing 400 n n C17 C18 QMU doub 401 n y C7 C8 QMU sing 402 n n C7 N QMU sing 403 n n O C1 QMU sing 404 n n C8 C9 QMU sing 405 n n C1 C3 QMU sing 406 n n C1 C2 QMU sing 407 n n C12 C18 QMU sing 408 n y C12 C11 QMU sing 409 n n C18 BR QMU sing 410 n n N C11 QMU sing 411 n n N C10 QMU sing 412 n n C9 C10 QMU sing 413 n n C11 O2 QMU doub 414 n n C2 H5 QMU sing 415 n n C2 H3 QMU sing 416 n n C2 H4 QMU sing 417 n n C3 H7 QMU sing 418 n n C3 H6 QMU sing 419 n n C3 H8 QMU sing 420 n n C8 H10 QMU sing 421 n n C8 H11 QMU sing 422 n n C9 H13 QMU sing 423 n n C9 H12 QMU sing 424 n n C10 H15 QMU sing 425 n n C10 H14 QMU sing 426 n n C15 H17 QMU sing 427 n n C16 H18 QMU sing 428 n n C17 H19 QMU sing 429 n n C H1 QMU sing 430 n n C H2 QMU sing 431 n n C H QMU sing 432 n n C14 H16 QMU sing 433 n n C7 H9 QMU sing 434 n n # _atom_sites.entry_id 8BHG _atom_sites.fract_transf_matrix[1][1] 0.012324 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.003548 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.007265 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.00918 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code F 3 QMU A 1 501 1 QMU BRZ . G 4 DMU A 1 502 1 DMU DMU . H 5 NO3 A 1 503 2 NO3 NO3 . I 6 NAG A 1 504 1 NAG NAG . J 3 QMU B 1 501 2 QMU BRZ . K 3 QMU B 1 502 5 QMU BRZ . L 4 DMU B 1 503 5 DMU DMU . M 5 NO3 B 1 504 1 NO3 NO3 . N 6 NAG B 1 505 1 NAG NAG . O 6 NAG B 1 506 2 NAG NAG . P 4 DMU C 1 501 4 DMU DMU . Q 5 NO3 C 1 502 3 NO3 NO3 . R 6 NAG C 1 503 1 NAG NAG . S 3 QMU D 1 501 3 QMU BRZ . T 3 QMU D 1 502 4 QMU BRZ . U 4 DMU D 1 503 3 DMU DMU . V 6 NAG D 1 504 1 NAG NAG . W 4 DMU E 1 501 2 DMU DMU . X 6 NAG E 1 502 1 NAG NAG . Y 7 HOH A 1 601 3 HOH HOH . Y 7 HOH A 2 602 1 HOH HOH . Y 7 HOH A 3 603 4 HOH HOH . Z 7 HOH B 1 601 8 HOH HOH . Z 7 HOH B 2 602 6 HOH HOH . Z 7 HOH B 3 603 5 HOH HOH . Z 7 HOH B 4 604 9 HOH HOH . AA 7 HOH C 1 601 2 HOH HOH . AA 7 HOH C 2 602 7 HOH HOH . AA 7 HOH C 3 603 11 HOH HOH . AA 7 HOH C 4 604 10 HOH HOH . BA 7 HOH D 1 601 12 HOH HOH . BA 7 HOH D 2 602 14 HOH HOH . CA 7 HOH E 1 601 13 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 QMU . . . F 3 4.084 -3.556 235.765 1 62.39 ? C1 QMU 501 A 1 HETATM 2 C C2 QMU . . . F 3 3.709 -4.693 236.698 1 65.1 ? C2 QMU 501 A 1 HETATM 3 C C3 QMU . . . F 3 3.79 -2.226 236.406 1 66.37 ? C3 QMU 501 A 1 HETATM 4 C C4 QMU . . . F 3 6.182 -3.389 234.462 1 52.41 ? C4 QMU 501 A 1 HETATM 5 C C5 QMU . . . F 3 7.63 -3.684 234.573 1 50.01 ? C5 QMU 501 A 1 HETATM 6 C C6 QMU . . . F 3 8.294 -4.842 234.93 1 49.97 ? C6 QMU 501 A 1 HETATM 7 C C8 QMU . . . F 3 6.431 -6.439 235.676 1 59.74 ? C8 QMU 501 A 1 HETATM 8 C C9 QMU . . . F 3 6.342 -7.155 237.016 1 61.47 ? C9 QMU 501 A 1 HETATM 9 C C10 QMU . . . F 3 7.449 -6.518 237.812 1 58.87 ? C10 QMU 501 A 1 HETATM 10 C C12 QMU . . . F 3 10.798 -6.314 236.029 1 52.79 ? C12 QMU 501 A 1 HETATM 11 C C13 QMU . . . F 3 10.731 -5.452 234.914 1 46.6 ? C13 QMU 501 A 1 HETATM 12 C C15 QMU . . . F 3 11.725 -5.46 233.942 1 45.79 ? C15 QMU 501 A 1 HETATM 13 C C16 QMU . . . F 3 12.797 -6.326 234.063 1 46.53 ? C16 QMU 501 A 1 HETATM 14 C C17 QMU . . . F 3 12.885 -7.19 235.139 1 46.49 ? C17 QMU 501 A 1 HETATM 15 C C18 QMU . . . F 3 11.894 -7.184 236.105 1 50.77 ? C18 QMU 501 A 1 HETATM 16 N N QMU . . . F 3 8.5 -6.357 236.806 1 54.32 ? N QMU 501 A 1 HETATM 17 C C QMU . . . F 3 3.361 -3.664 234.444 1 63.46 ? C QMU 501 A 1 HETATM 18 O O QMU . . . F 3 5.561 -3.609 235.626 1 54.03 ? O QMU 501 A 1 HETATM 19 C C11 QMU . . . F 3 9.807 -6.329 237.126 1 56.43 ? C11 QMU 501 A 1 HETATM 20 C C14 QMU . . . F 3 9.708 -3.248 234.322 1 47.86 ? C14 QMU 501 A 1 HETATM 21 C C7 QMU . . . F 3 7.941 -6.199 235.458 1 54.25 ? C7 QMU 501 A 1 HETATM 22 N N1 QMU . . . F 3 9.64 -4.547 234.747 1 47.03 ? N1 QMU 501 A 1 HETATM 23 N N2 QMU . . . F 3 8.528 -2.694 234.205 1 47.31 ? N2 QMU 501 A 1 HETATM 24 O O1 QMU . . . F 3 5.661 -3.042 233.432 1 59.95 ? O1 QMU 501 A 1 HETATM 25 O O2 QMU . . . F 3 10.183 -6.305 238.287 1 55.85 ? O2 QMU 501 A 1 HETATM 26 BR BR QMU . . . F 3 12.069 -8.414 237.537 1 100.69 ? BR QMU 501 A 1 HETATM 27 H H5 QMU . . . F 3 3.618 -5.653 236.193 1 80.49 ? H5 QMU 501 A 1 HETATM 28 H H3 QMU . . . F 3 2.756 -4.54 237.202 1 80.49 ? H3 QMU 501 A 1 HETATM 29 H H4 QMU . . . F 3 4.435 -4.853 237.495 1 80.49 ? H4 QMU 501 A 1 HETATM 30 H H7 QMU . . . F 3 4.026 -1.399 235.738 1 82.01 ? H7 QMU 501 A 1 HETATM 31 H H6 QMU . . . F 3 4.372 -2.082 237.315 1 82.01 ? H6 QMU 501 A 1 HETATM 32 H H8 QMU . . . F 3 2.739 -2.134 236.676 1 82.01 ? H8 QMU 501 A 1 HETATM 33 H H10 QMU . . . F 3 5.97 -7.058 234.908 1 74.06 ? H10 QMU 501 A 1 HETATM 34 H H11 QMU . . . F 3 5.843 -5.523 235.72 1 74.06 ? H11 QMU 501 A 1 HETATM 35 H H13 QMU . . . F 3 6.475 -8.232 236.925 1 76.13 ? H13 QMU 501 A 1 HETATM 36 H H12 QMU . . . F 3 5.372 -7.029 237.496 1 76.13 ? H12 QMU 501 A 1 HETATM 37 H H15 QMU . . . F 3 7.182 -5.557 238.249 1 73.02 ? H15 QMU 501 A 1 HETATM 38 H H14 QMU . . . F 3 7.801 -7.126 238.644 1 73.02 ? H14 QMU 501 A 1 HETATM 39 H H17 QMU . . . F 3 11.672 -4.792 233.084 1 57.32 ? H17 QMU 501 A 1 HETATM 40 H H18 QMU . . . F 3 13.58 -6.329 233.306 1 58.21 ? H18 QMU 501 A 1 HETATM 41 H H19 QMU . . . F 3 13.728 -7.875 235.231 1 58.16 ? H19 QMU 501 A 1 HETATM 42 H H1 QMU . . . F 3 3.493 -2.765 233.844 1 78.52 ? H1 QMU 501 A 1 HETATM 43 H H2 QMU . . . F 3 2.29 -3.807 234.587 1 78.52 ? H2 QMU 501 A 1 HETATM 44 H H QMU . . . F 3 3.727 -4.505 233.857 1 78.52 ? H QMU 501 A 1 HETATM 45 H H16 QMU . . . F 3 10.645 -2.737 234.105 1 59.8 ? H16 QMU 501 A 1 HETATM 46 H H9 QMU . . . F 3 8.312 -6.955 234.768 1 67.47 ? H9 QMU 501 A 1 # _model_server_stats.io_time_ms 56 _model_server_stats.parse_time_ms 18 _model_server_stats.create_model_time_ms 32 _model_server_stats.query_time_ms 276 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 46 #