data_8BHS
#
_model_server_result.job_id            Dx_w6h_sPaFEo0-jZzQWyw 
_model_server_result.datetime_utc      '2024-11-25 15:51:52' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          8bhs 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"F","auth_seq_id":501}' 
#
_entry.id    8BHS 
#
_exptl.entry_id    8BHS 
_exptl.method      'ELECTRON MICROSCOPY' 
#
_entity.details                     ? 
_entity.formula_weight              221.208 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            2-acetamido-2-deoxy-beta-D-glucopyranose 
_entity.pdbx_number_of_molecules    5 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            8BHS 
_cell.length_a            1 
_cell.length_b            1 
_cell.length_c            1 
_cell.Z_PDB               ? 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 8BHS 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        1 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    pentameric 
_pdbx_struct_assembly.oligomeric_count      5 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    ? 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 F N N 
? 2 H N N 
? 2 J N N 
? 2 L N N 
? 2 N N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 142 A CYS 142 1_555 A SG CYS 156 A CYS 156 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? 
disulf ? disulf2 B SG CYS 142 B CYS 142 1_555 B SG CYS 156 B CYS 156 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? 
disulf ? disulf3 C SG CYS 142 C CYS 142 1_555 C SG CYS 156 C CYS 156 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? 
disulf ? disulf4 D SG CYS 142 D CYS 142 1_555 D SG CYS 156 D CYS 156 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? 
disulf ? disulf5 E SG CYS 142 E CYS 142 1_555 E SG CYS 156 E CYS 156 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? 
covale ? covale1 A ND2 ASN 205 A ASN 205 1_555 F C1 NAG . A NAG 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.439 ? 
covale ? covale2 B ND2 ASN 205 B ASN 205 1_555 H C1 NAG . B NAG 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.44 ? 
covale ? covale3 C ND2 ASN 205 C ASN 205 1_555 J C1 NAG . C NAG 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.439 ? 
covale ? covale4 D ND2 ASN 205 D ASN 205 1_555 L C1 NAG . D NAG 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.44 ? 
covale ? covale5 E ND2 ASN 205 E ASN 205 1_555 N C1 NAG . E NAG 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.44 ? 
#
_chem_comp.formula           'C8 H15 N O6' 
_chem_comp.formula_weight    221.208 
_chem_comp.id                NAG 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              2-acetamido-2-deoxy-beta-D-glucopyranose 
_chem_comp.type              'd-saccharide, beta linking' 
_chem_comp.pdbx_synonyms     N-acetyl-beta-D-glucosamine;2-acetamido-2-deoxy-beta-D-glucose;2-acetamido-2-deoxy-D-glucose;2-acetamido-2-deoxy-glucose;N-ACETYL-D-GLUCOSAMINE 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 C2 NAG sing 235 n n 
C1 O1 NAG sing 236 n n 
C1 O5 NAG sing 237 n n 
C1 H1 NAG sing 238 n n 
C2 C3 NAG sing 239 n n 
C2 N2 NAG sing 240 n n 
C2 H2 NAG sing 241 n n 
C3 C4 NAG sing 242 n n 
C3 O3 NAG sing 243 n n 
C3 H3 NAG sing 244 n n 
C4 C5 NAG sing 245 n n 
C4 O4 NAG sing 246 n n 
C4 H4 NAG sing 247 n n 
C5 C6 NAG sing 248 n n 
C5 O5 NAG sing 249 n n 
C5 H5 NAG sing 250 n n 
C6 O6 NAG sing 251 n n 
C6 H61 NAG sing 252 n n 
C6 H62 NAG sing 253 n n 
C7 C8 NAG sing 254 n n 
C7 N2 NAG sing 255 n n 
C7 O7 NAG doub 256 n n 
C8 H81 NAG sing 257 n n 
C8 H82 NAG sing 258 n n 
C8 H83 NAG sing 259 n n 
N2 HN2 NAG sing 260 n n 
O1 HO1 NAG sing 261 n n 
O3 HO3 NAG sing 262 n n 
O4 HO4 NAG sing 263 n n 
O6 HO6 NAG sing 264 n n 
#
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.identifier
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
NAG DGlcpNAcb 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1 
NAG N-acetyl-b-D-glucopyranosamine 'COMMON NAME' GMML 1 
NAG b-D-GlcpNAc 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1 
NAG GlcNAc 'SNFG CARBOHYDRATE SYMBOL' GMML 1 
#
_atom_sites.entry_id                     8BHS 
_atom_sites.fract_transf_matrix[1][1]    1 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    1 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    1 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
F 2 NAG A 1 501 420 NAG NAG . 
G 3 QK9 A 1 502 421 QK9 581 . 
H 2 NAG B 1 501 420 NAG NAG . 
I 3 QK9 B 1 502 421 QK9 581 . 
J 2 NAG C 1 501 420 NAG NAG . 
K 3 QK9 C 1 502 421 QK9 581 . 
L 2 NAG D 1 501 420 NAG NAG . 
M 3 QK9 D 1 502 421 QK9 581 . 
N 2 NAG E 1 501 420 NAG NAG . 
O 3 QK9 E 1 502 421 QK9 581 . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 NAG . . . F 2 177.242 204.765 138.962 1 122.76 ? C1 NAG 501 A 1 
HETATM 2 C C2 NAG . . . F 2 177.102 206.099 139.686 1 123.05 ? C2 NAG 501 A 1 
HETATM 3 C C3 NAG . . . F 2 176.118 207.009 138.972 1 122.63 ? C3 NAG 501 A 1 
HETATM 4 C C4 NAG . . . F 2 176.527 207.151 137.516 1 124.57 ? C4 NAG 501 A 1 
HETATM 5 C C5 NAG . . . F 2 176.687 205.779 136.873 1 124.87 ? C5 NAG 501 A 1 
HETATM 6 C C6 NAG . . . F 2 177.187 205.911 135.44 1 123.35 ? C6 NAG 501 A 1 
HETATM 7 C C7 NAG . . . F 2 177.454 206.138 142.095 1 124.85 ? C7 NAG 501 A 1 
HETATM 8 C C8 NAG . . . F 2 176.876 205.855 143.449 1 119.36 ? C8 NAG 501 A 1 
HETATM 9 N N2 NAG . . . F 2 176.67 205.873 141.052 1 124.49 ? N2 NAG 501 A 1 
HETATM 10 O O3 NAG . . . F 2 176.117 208.277 139.587 1 122.78 ? O3 NAG 501 A 1 
HETATM 11 O O4 NAG . . . F 2 175.547 207.887 136.819 1 121.3 ? O4 NAG 501 A 1 
HETATM 12 O O5 NAG . . . F 2 177.587 204.972 137.605 1 124.45 ? O5 NAG 501 A 1 
HETATM 13 O O6 NAG . . . F 2 178.503 206.417 135.447 1 122.75 ? O6 NAG 501 A 1 
HETATM 14 O O7 NAG . . . F 2 178.593 206.59 141.989 1 122.26 ? O7 NAG 501 A 1 
HETATM 15 H H2 NAG . . . F 2 178.075 206.589 139.693 1 121.02 ? H2 NAG 501 A 1 
HETATM 16 H H3 NAG . . . F 2 175.125 206.567 139.049 1 121.39 ? H3 NAG 501 A 1 
HETATM 17 H H4 NAG . . . F 2 177.475 207.688 137.481 1 121.42 ? H4 NAG 501 A 1 
HETATM 18 H H5 NAG . . . F 2 175.712 205.293 136.855 1 121.11 ? H5 NAG 501 A 1 
HETATM 19 H H61 NAG . . . F 2 177.138 204.939 134.949 1 121.01 ? H61 NAG 501 A 1 
HETATM 20 H H62 NAG . . . F 2 176.539 206.595 134.892 1 121.41 ? H62 NAG 501 A 1 
HETATM 21 H H81 NAG . . . F 2 177.494 205.117 143.961 1 120.81 ? H81 NAG 501 A 1 
HETATM 22 H H82 NAG . . . F 2 176.851 206.775 144.033 1 121.11 ? H82 NAG 501 A 1 
HETATM 23 H H83 NAG . . . F 2 175.864 205.467 143.339 1 120.26 ? H83 NAG 501 A 1 
HETATM 24 H HN2 NAG . . . F 2 175.768 205.445 141.2 1 120.96 ? HN2 NAG 501 A 1 
HETATM 25 H HO3 NAG . . . F 2 176.763 208.281 140.324 1 121.72 ? HO3 NAG 501 A 1 
HETATM 26 H HO4 NAG . . . F 2 174.831 208.144 137.437 1 121.48 ? HO4 NAG 501 A 1 
HETATM 27 H HO6 NAG . . . F 2 178.812 206.511 136.372 1 121.52 ? HO6 NAG 501 A 1 
#
_model_server_stats.io_time_ms              17 
_model_server_stats.parse_time_ms           10 
_model_server_stats.create_model_time_ms    32 
_model_server_stats.query_time_ms           269 
_model_server_stats.encode_time_ms          6 
_model_server_stats.element_count           27 
#