data_8BIN # _model_server_result.job_id FVmzf0AEy6SVmoMpG82C-A _model_server_result.datetime_utc '2025-01-10 16:22:37' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8bin # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":1002}' # _entry.id 8BIN # _exptl.entry_id 8BIN _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 62.068 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1,2-ETHANEDIOL _entity.pdbx_number_of_molecules 7 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 108.94 _cell.angle_gamma 90 _cell.entry_id 8BIN _cell.length_a 32.803 _cell.length_b 107.678 _cell.length_c 40.661 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8BIN _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 B N N ? 2 C N N ? 2 D N N ? 2 E N N ? 2 G N N ? 2 H N N ? 2 I N N # _chem_comp.formula 'C2 H6 O2' _chem_comp.formula_weight 62.068 _chem_comp.id EDO _chem_comp.mon_nstd_flag . _chem_comp.name 1,2-ETHANEDIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'ETHYLENE GLYCOL' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 EDO sing 83 n n C1 C2 EDO sing 84 n n C1 H11 EDO sing 85 n n C1 H12 EDO sing 86 n n O1 HO1 EDO sing 87 n n C2 O2 EDO sing 88 n n C2 H21 EDO sing 89 n n C2 H22 EDO sing 90 n n O2 HO2 EDO sing 91 n n # _atom_sites.entry_id 8BIN _atom_sites.fract_transf_matrix[1][1] 0.030485 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.01046 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009287 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.026001 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 EDO A 1 1001 1 EDO EDO . C 2 EDO A 1 1002 2 EDO EDO . D 2 EDO A 1 1003 3 EDO EDO . E 2 EDO A 1 1004 1001 EDO EDO . F 3 QRR A 1 1005 1002 QRR XXX . G 2 EDO A 1 1006 1003 EDO EDO . H 2 EDO A 1 1007 1005 EDO EDO . I 2 EDO A 1 1008 1006 EDO EDO . J 4 HOH A 1 1101 143 HOH HOH . J 4 HOH A 2 1102 145 HOH HOH . J 4 HOH A 3 1103 120 HOH HOH . J 4 HOH A 4 1104 99 HOH HOH . J 4 HOH A 5 1105 33 HOH HOH . J 4 HOH A 6 1106 62 HOH HOH . J 4 HOH A 7 1107 155 HOH HOH . J 4 HOH A 8 1108 40 HOH HOH . J 4 HOH A 9 1109 154 HOH HOH . J 4 HOH A 10 1110 70 HOH HOH . J 4 HOH A 11 1111 49 HOH HOH . J 4 HOH A 12 1112 9 HOH HOH . J 4 HOH A 13 1113 63 HOH HOH . J 4 HOH A 14 1114 53 HOH HOH . J 4 HOH A 15 1115 146 HOH HOH . J 4 HOH A 16 1116 8 HOH HOH . J 4 HOH A 17 1117 106 HOH HOH . J 4 HOH A 18 1118 123 HOH HOH . J 4 HOH A 19 1119 56 HOH HOH . J 4 HOH A 20 1120 55 HOH HOH . J 4 HOH A 21 1121 5 HOH HOH . J 4 HOH A 22 1122 32 HOH HOH . J 4 HOH A 23 1123 21 HOH HOH . J 4 HOH A 24 1124 82 HOH HOH . J 4 HOH A 25 1125 50 HOH HOH . J 4 HOH A 26 1126 27 HOH HOH . J 4 HOH A 27 1127 72 HOH HOH . J 4 HOH A 28 1128 6 HOH HOH . J 4 HOH A 29 1129 4 HOH HOH . J 4 HOH A 30 1130 90 HOH HOH . J 4 HOH A 31 1131 26 HOH HOH . J 4 HOH A 32 1132 45 HOH HOH . J 4 HOH A 33 1133 152 HOH HOH . J 4 HOH A 34 1134 73 HOH HOH . J 4 HOH A 35 1135 12 HOH HOH . J 4 HOH A 36 1136 37 HOH HOH . J 4 HOH A 37 1137 153 HOH HOH . J 4 HOH A 38 1138 41 HOH HOH . J 4 HOH A 39 1139 38 HOH HOH . J 4 HOH A 40 1140 68 HOH HOH . J 4 HOH A 41 1141 13 HOH HOH . J 4 HOH A 42 1142 78 HOH HOH . J 4 HOH A 43 1143 24 HOH HOH . J 4 HOH A 44 1144 85 HOH HOH . J 4 HOH A 45 1145 148 HOH HOH . J 4 HOH A 46 1146 92 HOH HOH . J 4 HOH A 47 1147 75 HOH HOH . J 4 HOH A 48 1148 34 HOH HOH . J 4 HOH A 49 1149 109 HOH HOH . J 4 HOH A 50 1150 149 HOH HOH . J 4 HOH A 51 1151 44 HOH HOH . J 4 HOH A 52 1152 17 HOH HOH . J 4 HOH A 53 1153 88 HOH HOH . J 4 HOH A 54 1154 94 HOH HOH . J 4 HOH A 55 1155 39 HOH HOH . J 4 HOH A 56 1156 43 HOH HOH . J 4 HOH A 57 1157 22 HOH HOH . J 4 HOH A 58 1158 76 HOH HOH . J 4 HOH A 59 1159 142 HOH HOH . J 4 HOH A 60 1160 93 HOH HOH . J 4 HOH A 61 1161 67 HOH HOH . J 4 HOH A 62 1162 144 HOH HOH . J 4 HOH A 63 1163 25 HOH HOH . J 4 HOH A 64 1164 111 HOH HOH . J 4 HOH A 65 1165 16 HOH HOH . J 4 HOH A 66 1166 15 HOH HOH . J 4 HOH A 67 1167 65 HOH HOH . J 4 HOH A 68 1168 150 HOH HOH . J 4 HOH A 69 1169 104 HOH HOH . J 4 HOH A 70 1170 77 HOH HOH . J 4 HOH A 71 1171 3 HOH HOH . J 4 HOH A 72 1172 100 HOH HOH . J 4 HOH A 73 1173 81 HOH HOH . J 4 HOH A 74 1174 14 HOH HOH . J 4 HOH A 75 1175 108 HOH HOH . J 4 HOH A 76 1176 89 HOH HOH . J 4 HOH A 77 1177 20 HOH HOH . J 4 HOH A 78 1178 31 HOH HOH . J 4 HOH A 79 1179 97 HOH HOH . J 4 HOH A 80 1180 151 HOH HOH . J 4 HOH A 81 1181 10 HOH HOH . J 4 HOH A 82 1182 18 HOH HOH . J 4 HOH A 83 1183 116 HOH HOH . J 4 HOH A 84 1184 83 HOH HOH . J 4 HOH A 85 1185 30 HOH HOH . J 4 HOH A 86 1186 11 HOH HOH . J 4 HOH A 87 1187 58 HOH HOH . J 4 HOH A 88 1188 147 HOH HOH . J 4 HOH A 89 1189 66 HOH HOH . J 4 HOH A 90 1190 57 HOH HOH . J 4 HOH A 91 1191 47 HOH HOH . J 4 HOH A 92 1192 23 HOH HOH . J 4 HOH A 93 1193 87 HOH HOH . J 4 HOH A 94 1194 74 HOH HOH . J 4 HOH A 95 1195 60 HOH HOH . J 4 HOH A 96 1196 118 HOH HOH . J 4 HOH A 97 1197 42 HOH HOH . J 4 HOH A 98 1198 125 HOH HOH . J 4 HOH A 99 1199 46 HOH HOH . J 4 HOH A 100 1200 51 HOH HOH . J 4 HOH A 101 1201 19 HOH HOH . J 4 HOH A 102 1202 113 HOH HOH . J 4 HOH A 103 1203 129 HOH HOH . J 4 HOH A 104 1204 80 HOH HOH . J 4 HOH A 105 1205 110 HOH HOH . J 4 HOH A 106 1206 36 HOH HOH . J 4 HOH A 107 1207 86 HOH HOH . J 4 HOH A 108 1208 95 HOH HOH . J 4 HOH A 109 1209 114 HOH HOH . J 4 HOH A 110 1210 91 HOH HOH . J 4 HOH A 111 1211 112 HOH HOH . J 4 HOH A 112 1212 96 HOH HOH . J 4 HOH A 113 1213 101 HOH HOH . J 4 HOH A 114 1214 127 HOH HOH . J 4 HOH A 115 1215 84 HOH HOH . J 4 HOH A 116 1216 98 HOH HOH . J 4 HOH A 117 1217 130 HOH HOH . J 4 HOH A 118 1218 107 HOH HOH . J 4 HOH A 119 1219 136 HOH HOH . J 4 HOH A 120 1220 137 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 EDO . . . C 2 -6.203 5.778 33.803 1 22.22 ? C1 EDO 1002 A 1 HETATM 2 O O1 EDO . . . C 2 -6.565 7.047 33.305 1 18.52 ? O1 EDO 1002 A 1 HETATM 3 C C2 EDO . . . C 2 -7.086 5.225 34.81 1 23.91 ? C2 EDO 1002 A 1 HETATM 4 O O2 EDO . . . C 2 -7.507 6.228 35.71 1 23.35 ? O2 EDO 1002 A 1 # _model_server_stats.io_time_ms 12 _model_server_stats.parse_time_ms 24 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 274 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 4 #