data_8BIQ
#
_model_server_result.job_id            5p4dxX2nSovtIJUx4XvLBA 
_model_server_result.datetime_utc      '2025-07-03 02:29:15' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          8biq 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"H","auth_seq_id":601}' 
#
_entry.id    8BIQ 
#
_exptl.entry_id    8BIQ 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              347.221 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'ADENOSINE MONOPHOSPHATE' 
_entity.pdbx_number_of_molecules    3 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          92.97 
_cell.angle_gamma         90 
_cell.entry_id            8BIQ 
_cell.length_a            100.864 
_cell.length_b            88.289 
_cell.length_c            131.207 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 8BIQ 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        4 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1 21 1' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    tetrameric 
_pdbx_struct_assembly.oligomeric_count      4 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 E N N 
? 2 F N N 
? 2 H N N 
#
_chem_comp.formula           'C10 H14 N5 O7 P' 
_chem_comp.formula_weight    347.221 
_chem_comp.id                AMP 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'ADENOSINE MONOPHOSPHATE' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
P O1P AMP doub 57 n n 
P O2P AMP sing 58 n n 
P O3P AMP sing 59 n n 
P O5' AMP sing 60 n n 
O2P HOP2 AMP sing 61 n n 
O3P HOP3 AMP sing 62 n n 
O5' C5' AMP sing 63 n n 
C5' C4' AMP sing 64 n n 
C5' "H5'1" AMP sing 65 n n 
C5' "H5'2" AMP sing 66 n n 
C4' O4' AMP sing 67 n n 
C4' C3' AMP sing 68 n n 
C4' H4' AMP sing 69 n n 
O4' C1' AMP sing 70 n n 
C3' O3' AMP sing 71 n n 
C3' C2' AMP sing 72 n n 
C3' H3' AMP sing 73 n n 
O3' HO3' AMP sing 74 n n 
C2' O2' AMP sing 75 n n 
C2' C1' AMP sing 76 n n 
C2' H2' AMP sing 77 n n 
O2' HO2' AMP sing 78 n n 
C1' N9 AMP sing 79 n n 
C1' H1' AMP sing 80 n n 
N9 C8 AMP sing 81 n y 
N9 C4 AMP sing 82 n y 
C8 N7 AMP doub 83 n y 
C8 H8 AMP sing 84 n n 
N7 C5 AMP sing 85 n y 
C5 C6 AMP sing 86 n y 
C5 C4 AMP doub 87 n y 
C6 N6 AMP sing 88 n n 
C6 N1 AMP doub 89 n y 
N6 HN61 AMP sing 90 n n 
N6 HN62 AMP sing 91 n n 
N1 C2 AMP sing 92 n y 
C2 N3 AMP doub 93 n y 
C2 H2 AMP sing 94 n n 
N3 C4 AMP sing 95 n y 
#
_atom_sites.entry_id                     8BIQ 
_atom_sites.fract_transf_matrix[1][1]    0.009914 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.000514 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.011326 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.007632 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
E 2 AMP D 1 601 601 AMP AMP . 
F 2 AMP A 1 601 601 AMP AMP . 
G 3 6R9 B 1 601 601 6R9 6R9 . 
H 2 AMP C 1 601 601 AMP AMP . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 P P AMP . . . H 2 -51.049 -31.372 20.874 1 51.98 ? P AMP 601 C 1 
HETATM 2 O O1P AMP . . . H 2 -51.109 -31.041 19.345 1 50.58 ? O1P AMP 601 C 1 
HETATM 3 O O2P AMP . . . H 2 -49.687 -31.965 21.408 1 50.6 ? O2P AMP 601 C 1 
HETATM 4 O O3P AMP . . . H 2 -51.625 -30.239 21.725 1 49.46 ? O3P AMP 601 C 1 
HETATM 5 O O5' AMP . . . H 2 -52.062 -32.618 21.092 1 52.06 ? O5' AMP 601 C 1 
HETATM 6 C C5' AMP . . . H 2 -51.855 -33.838 20.312 1 51.89 ? C5' AMP 601 C 1 
HETATM 7 C C4' AMP . . . H 2 -52.955 -34.814 20.642 1 51.47 ? C4' AMP 601 C 1 
HETATM 8 O O4' AMP . . . H 2 -54.238 -34.266 20.239 1 50.01 ? O4' AMP 601 C 1 
HETATM 9 C C3' AMP . . . H 2 -52.811 -36.159 19.927 1 52.09 ? C3' AMP 601 C 1 
HETATM 10 O O3' AMP . . . H 2 -51.977 -37.029 20.682 1 52.16 ? O3' AMP 601 C 1 
HETATM 11 C C2' AMP . . . H 2 -54.271 -36.594 19.765 1 52.25 ? C2' AMP 601 C 1 
HETATM 12 O O2' AMP . . . H 2 -54.749 -37.366 20.834 1 52.51 ? O2' AMP 601 C 1 
HETATM 13 C C1' AMP . . . H 2 -55.057 -35.288 19.739 1 51.46 ? C1' AMP 601 C 1 
HETATM 14 N N9 AMP . . . H 2 -55.498 -34.94 18.397 1 52.67 ? N9 AMP 601 C 1 
HETATM 15 C C8 AMP . . . H 2 -54.888 -34.077 17.531 1 52.61 ? C8 AMP 601 C 1 
HETATM 16 N N7 AMP . . . H 2 -55.524 -33.961 16.395 1 53.71 ? N7 AMP 601 C 1 
HETATM 17 C C5 AMP . . . H 2 -56.629 -34.784 16.527 1 55.1 ? C5 AMP 601 C 1 
HETATM 18 C C6 AMP . . . H 2 -57.684 -35.097 15.651 1 57.96 ? C6 AMP 601 C 1 
HETATM 19 N N6 AMP . . . H 2 -57.795 -34.593 14.423 1 59.78 ? N6 AMP 601 C 1 
HETATM 20 N N1 AMP . . . H 2 -58.625 -35.969 16.092 1 58.63 ? N1 AMP 601 C 1 
HETATM 21 C C2 AMP . . . H 2 -58.504 -36.475 17.324 1 56.52 ? C2 AMP 601 C 1 
HETATM 22 N N3 AMP . . . H 2 -57.539 -36.279 18.207 1 55.33 ? N3 AMP 601 C 1 
HETATM 23 C C4 AMP . . . H 2 -56.622 -35.406 17.752 1 54.28 ? C4 AMP 601 C 1 
#
_model_server_stats.io_time_ms              194 
_model_server_stats.parse_time_ms           20 
_model_server_stats.create_model_time_ms    49 
_model_server_stats.query_time_ms           284 
_model_server_stats.encode_time_ms          3 
_model_server_stats.element_count           23 
#