data_8BIR # _model_server_result.job_id aCeZotkI4B2PEM3lbmJeMg _model_server_result.datetime_utc '2024-10-20 03:26:43' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8bir # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":404}' # _entry.id 8BIR # _exptl.entry_id 8BIR _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 126.904 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'IODIDE ION' _entity.pdbx_number_of_molecules 6 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 92.47 _cell.angle_gamma 90 _cell.entry_id 8BIR _cell.length_a 137.06 _cell.length_b 40.13 _cell.length_c 119.29 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8BIR _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 E N N ? 4 F N N ? 4 G N N ? 4 L N N ? 4 M N N ? 4 N N N # _chem_comp.formula 'I -1' _chem_comp.formula_weight 126.904 _chem_comp.id IOD _chem_comp.mon_nstd_flag . _chem_comp.name 'IODIDE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 8BIR _atom_sites.fract_transf_matrix[1][1] 0.007296 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.000315 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.024919 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008391 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 SAH A 1 401 900 SAH SAH . D 3 QOI A 1 402 999 QOI LIG . E 4 IOD A 1 403 1 IOD IOD . F 4 IOD A 1 404 4 IOD IOD . G 4 IOD A 1 405 6 IOD IOD . H 5 CL A 1 406 10 CL CL . I 5 CL A 1 407 13 CL CL . J 2 SAH B 1 401 900 SAH SAH . K 3 QOI B 1 402 999 QOI LIG . L 4 IOD B 1 403 2 IOD IOD . M 4 IOD B 1 404 3 IOD IOD . N 4 IOD B 1 405 5 IOD IOD . O 6 NA B 1 406 7 NA NA . P 5 CL B 1 407 8 CL CL . Q 5 CL B 1 408 9 CL CL . R 5 CL B 1 409 11 CL CL . S 5 CL B 1 410 12 CL CL . T 5 CL B 1 411 14 CL CL . U 7 HOH A 1 501 16 HOH HOH . U 7 HOH A 2 502 57 HOH HOH . U 7 HOH A 3 503 45 HOH HOH . U 7 HOH A 4 504 46 HOH HOH . U 7 HOH A 5 505 47 HOH HOH . U 7 HOH A 6 506 59 HOH HOH . U 7 HOH A 7 507 42 HOH HOH . U 7 HOH A 8 508 44 HOH HOH . U 7 HOH A 9 509 26 HOH HOH . U 7 HOH A 10 510 21 HOH HOH . U 7 HOH A 11 511 43 HOH HOH . V 7 HOH B 1 501 30 HOH HOH . V 7 HOH B 2 502 54 HOH HOH . V 7 HOH B 3 503 18 HOH HOH . V 7 HOH B 4 504 50 HOH HOH . V 7 HOH B 5 505 19 HOH HOH . V 7 HOH B 6 506 48 HOH HOH . V 7 HOH B 7 507 58 HOH HOH . V 7 HOH B 8 508 53 HOH HOH . V 7 HOH B 9 509 49 HOH HOH . V 7 HOH B 10 510 51 HOH HOH . V 7 HOH B 11 511 56 HOH HOH . V 7 HOH B 12 512 38 HOH HOH . V 7 HOH B 13 513 39 HOH HOH . V 7 HOH B 14 514 55 HOH HOH . V 7 HOH B 15 515 15 HOH HOH . V 7 HOH B 16 516 22 HOH HOH . V 7 HOH B 17 517 20 HOH HOH . V 7 HOH B 18 518 60 HOH HOH . V 7 HOH B 19 519 61 HOH HOH . V 7 HOH B 20 520 52 HOH HOH . V 7 HOH B 21 521 40 HOH HOH . V 7 HOH B 22 522 41 HOH HOH . V 7 HOH B 23 523 35 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol I _atom_site.label_atom_id I _atom_site.label_comp_id IOD _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id F _atom_site.label_entity_id 4 _atom_site.Cartn_x -5.495 _atom_site.Cartn_y 21.83 _atom_site.Cartn_z 22.77 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 66.28 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id I _atom_site.auth_comp_id IOD _atom_site.auth_seq_id 404 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 17 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 8 _model_server_stats.query_time_ms 264 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 1 #