data_8BIT # _model_server_result.job_id pq6BIpCLVBvgIBzJwtdj7A _model_server_result.datetime_utc '2025-07-05 03:44:59' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8bit # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":602}' # _entry.id 8BIT # _exptl.entry_id 8BIT _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 767.534 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'COENZYME A' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 91.12 _cell.angle_gamma 90 _cell.entry_id 8BIT _cell.length_a 105.806 _cell.length_b 93.19 _cell.length_c 131.685 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8BIT _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 D N N ? 3 F N N # _chem_comp.formula 'C21 H36 N7 O16 P3 S' _chem_comp.formula_weight 767.534 _chem_comp.id COA _chem_comp.mon_nstd_flag . _chem_comp.name 'COENZYME A' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N1A C2A COA sing 114 n y N1A C6A COA doub 115 n y C2A N3A COA doub 116 n y C2A H2A COA sing 117 n n N3A C4A COA sing 118 n y C4A C5A COA doub 119 n y C4A N9A COA sing 120 n y C5A C6A COA sing 121 n y C5A N7A COA sing 122 n y C6A N6A COA sing 123 n n N6A H61A COA sing 124 n n N6A H62A COA sing 125 n n N7A C8A COA doub 126 n y C8A N9A COA sing 127 n y C8A H8A COA sing 128 n n N9A C1B COA sing 129 n n C1B C2B COA sing 130 n n C1B O4B COA sing 131 n n C1B H1B COA sing 132 n n C2B O2B COA sing 133 n n C2B C3B COA sing 134 n n C2B H2B COA sing 135 n n O2B HO2A COA sing 136 n n C3B O3B COA sing 137 n n C3B C4B COA sing 138 n n C3B H3B COA sing 139 n n O3B P3B COA sing 140 n n P3B O7A COA doub 141 n n P3B O8A COA sing 142 n n P3B O9A COA sing 143 n n O8A HOA8 COA sing 144 n n O9A HOA9 COA sing 145 n n C4B O4B COA sing 146 n n C4B C5B COA sing 147 n n C4B H4B COA sing 148 n n C5B O5B COA sing 149 n n C5B H51A COA sing 150 n n C5B H52A COA sing 151 n n O5B P1A COA sing 152 n n P1A O1A COA doub 153 n n P1A O2A COA sing 154 n n P1A O3A COA sing 155 n n O2A HOA2 COA sing 156 n n O3A P2A COA sing 157 n n P2A O4A COA doub 158 n n P2A O5A COA sing 159 n n P2A O6A COA sing 160 n n O5A HOA5 COA sing 161 n n O6A CCP COA sing 162 n n CBP CCP COA sing 163 n n CBP CDP COA sing 164 n n CBP CEP COA sing 165 n n CBP CAP COA sing 166 n n CCP H121 COA sing 167 n n CCP H122 COA sing 168 n n CDP H131 COA sing 169 n n CDP H132 COA sing 170 n n CDP H133 COA sing 171 n n CEP H141 COA sing 172 n n CEP H142 COA sing 173 n n CEP H143 COA sing 174 n n CAP OAP COA sing 175 n n CAP C9P COA sing 176 n n CAP H10 COA sing 177 n n OAP HO1 COA sing 178 n n C9P O9P COA doub 179 n n C9P N8P COA sing 180 n n N8P C7P COA sing 181 n n N8P HN8 COA sing 182 n n C7P C6P COA sing 183 n n C7P H71 COA sing 184 n n C7P H72 COA sing 185 n n C6P C5P COA sing 186 n n C6P H61 COA sing 187 n n C6P H62 COA sing 188 n n C5P O5P COA doub 189 n n C5P N4P COA sing 190 n n N4P C3P COA sing 191 n n N4P HN4 COA sing 192 n n C3P C2P COA sing 193 n n C3P H31 COA sing 194 n n C3P H32 COA sing 195 n n C2P S1P COA sing 196 n n C2P H21 COA sing 197 n n C2P H22 COA sing 198 n n S1P HS1 COA sing 199 n n # _atom_sites.entry_id 8BIT _atom_sites.fract_transf_matrix[1][1] 0.009451 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.000185 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.010731 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007595 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 6R9 B 1 601 601 6R9 6R9 . D 3 COA B 1 602 602 COA COA . E 2 6R9 A 1 601 601 6R9 6R9 . F 3 COA A 1 602 602 COA COA . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1A COA . . . D 3 21.545 70.969 28.699 1 108.91 ? N1A COA 602 B 1 HETATM 2 C C2A COA . . . D 3 20.301 71.373 29.002 1 108.65 ? C2A COA 602 B 1 HETATM 3 N N3A COA . . . D 3 19.169 70.673 28.97 1 106.73 ? N3A COA 602 B 1 HETATM 4 C C4A COA . . . D 3 19.399 69.401 28.576 1 109.37 ? C4A COA 602 B 1 HETATM 5 C C5A COA . . . D 3 20.614 68.838 28.237 1 100.76 ? C5A COA 602 B 1 HETATM 6 C C6A COA . . . D 3 21.736 69.683 28.307 1 98.32 ? C6A COA 602 B 1 HETATM 7 N N6A COA . . . D 3 22.961 69.277 28.025 1 88.17 ? N6A COA 602 B 1 HETATM 8 N N7A COA . . . D 3 20.467 67.5 27.877 1 91.52 ? N7A COA 602 B 1 HETATM 9 C C8A COA . . . D 3 19.174 67.279 27.973 1 105.3 ? C8A COA 602 B 1 HETATM 10 N N9A COA . . . D 3 18.472 68.402 28.41 1 118 ? N9A COA 602 B 1 HETATM 11 C C1B COA . . . D 3 17.037 68.518 28.691 1 124.5 ? C1B COA 602 B 1 HETATM 12 C C2B COA . . . D 3 16.344 69.74 28.081 1 129.63 ? C2B COA 602 B 1 HETATM 13 O O2B COA . . . D 3 16.206 70.843 28.953 1 127.26 ? O2B COA 602 B 1 HETATM 14 C C3B COA . . . D 3 14.985 69.143 27.726 1 139.74 ? C3B COA 602 B 1 HETATM 15 O O3B COA . . . D 3 14.154 68.913 28.861 1 158.81 ? O3B COA 602 B 1 HETATM 16 P P3B COA . . . D 3 12.557 68.921 28.549 1 168.05 ? P3B COA 602 B 1 HETATM 17 O O7A COA . . . D 3 11.939 68.644 29.908 1 200.04 ? O7A COA 602 B 1 HETATM 18 O O8A COA . . . D 3 12.186 67.856 27.535 1 154.22 ? O8A COA 602 B 1 HETATM 19 O O9A COA . . . D 3 12.239 70.313 28.04 1 176.11 ? O9A COA 602 B 1 HETATM 20 C C4B COA . . . D 3 15.41 67.797 27.189 1 138.69 ? C4B COA 602 B 1 HETATM 21 O O4B COA . . . D 3 16.407 67.375 28.154 1 130.28 ? O4B COA 602 B 1 HETATM 22 C C5B COA . . . D 3 15.967 67.811 25.781 1 127.67 ? C5B COA 602 B 1 HETATM 23 O O5B COA . . . D 3 16.72 66.591 25.59 1 111.88 ? O5B COA 602 B 1 HETATM 24 P P1A COA . . . D 3 15.978 65.334 24.893 1 103.16 ? P1A COA 602 B 1 HETATM 25 O O1A COA . . . D 3 14.623 65.128 25.465 1 107.06 ? O1A COA 602 B 1 HETATM 26 O O2A COA . . . D 3 16.909 64.156 24.902 1 112.13 ? O2A COA 602 B 1 HETATM 27 O O3A COA . . . D 3 15.732 65.904 23.408 1 110.7 ? O3A COA 602 B 1 HETATM 28 P P2A COA . . . D 3 14.494 66.379 22.495 1 97.12 ? P2A COA 602 B 1 HETATM 29 O O4A COA . . . D 3 13.311 65.567 22.876 1 92.91 ? O4A COA 602 B 1 HETATM 30 O O5A COA . . . D 3 14.436 67.874 22.54 1 89.86 ? O5A COA 602 B 1 HETATM 31 O O6A COA . . . D 3 15 65.839 21.069 1 82.01 ? O6A COA 602 B 1 HETATM 32 C CBP COA . . . D 3 16.526 64.129 20.253 1 75.31 ? CBP COA 602 B 1 HETATM 33 C CCP COA . . . D 3 15.156 64.408 20.878 1 75.02 ? CCP COA 602 B 1 HETATM 34 C CDP COA . . . D 3 16.518 62.712 19.666 1 71.2 ? CDP COA 602 B 1 HETATM 35 C CEP COA . . . D 3 16.816 65.175 19.164 1 76.87 ? CEP COA 602 B 1 HETATM 36 C CAP COA . . . D 3 17.665 64.187 21.264 1 80.74 ? CAP COA 602 B 1 HETATM 37 O OAP COA . . . D 3 17.44 63.138 22.184 1 85.92 ? OAP COA 602 B 1 HETATM 38 C C9P COA . . . D 3 19.06 64.038 20.678 1 78.77 ? C9P COA 602 B 1 HETATM 39 O O9P COA . . . D 3 19.606 65.01 20.142 1 74.7 ? O9P COA 602 B 1 HETATM 40 N N8P COA . . . D 3 19.623 62.838 20.813 1 75.58 ? N8P COA 602 B 1 HETATM 41 C C7P COA . . . D 3 20.981 62.534 20.374 1 82.29 ? C7P COA 602 B 1 HETATM 42 C C6P COA . . . D 3 21.093 61.392 19.347 1 80.84 ? C6P COA 602 B 1 HETATM 43 C C5P COA . . . D 3 22.48 60.829 19.533 1 77.21 ? C5P COA 602 B 1 HETATM 44 O O5P COA . . . D 3 23.469 61.499 19.26 1 77.99 ? O5P COA 602 B 1 HETATM 45 N N4P COA . . . D 3 22.556 59.589 20.016 1 78.25 ? N4P COA 602 B 1 HETATM 46 C C3P COA . . . D 3 23.631 59.132 20.881 1 86.76 ? C3P COA 602 B 1 HETATM 47 C C2P COA . . . D 3 24.208 57.798 20.463 1 93.88 ? C2P COA 602 B 1 HETATM 48 S S1P COA . . . D 3 24.689 57.726 18.72 1 96.04 ? S1P COA 602 B 1 # _model_server_stats.io_time_ms 86 _model_server_stats.parse_time_ms 23 _model_server_stats.create_model_time_ms 9 _model_server_stats.query_time_ms 299 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 48 #