data_8BIT # _model_server_result.job_id u7iZsuvNYDbqIbr8AjBXEQ _model_server_result.datetime_utc '2025-07-02 23:40:29' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8bit # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":602}' # _entry.id 8BIT # _exptl.entry_id 8BIT _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 767.534 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'COENZYME A' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 91.12 _cell.angle_gamma 90 _cell.entry_id 8BIT _cell.length_a 105.806 _cell.length_b 93.19 _cell.length_c 131.685 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8BIT _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 D N N ? 3 F N N # _chem_comp.formula 'C21 H36 N7 O16 P3 S' _chem_comp.formula_weight 767.534 _chem_comp.id COA _chem_comp.mon_nstd_flag . _chem_comp.name 'COENZYME A' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N1A C2A COA sing 114 n y N1A C6A COA doub 115 n y C2A N3A COA doub 116 n y C2A H2A COA sing 117 n n N3A C4A COA sing 118 n y C4A C5A COA doub 119 n y C4A N9A COA sing 120 n y C5A C6A COA sing 121 n y C5A N7A COA sing 122 n y C6A N6A COA sing 123 n n N6A H61A COA sing 124 n n N6A H62A COA sing 125 n n N7A C8A COA doub 126 n y C8A N9A COA sing 127 n y C8A H8A COA sing 128 n n N9A C1B COA sing 129 n n C1B C2B COA sing 130 n n C1B O4B COA sing 131 n n C1B H1B COA sing 132 n n C2B O2B COA sing 133 n n C2B C3B COA sing 134 n n C2B H2B COA sing 135 n n O2B HO2A COA sing 136 n n C3B O3B COA sing 137 n n C3B C4B COA sing 138 n n C3B H3B COA sing 139 n n O3B P3B COA sing 140 n n P3B O7A COA doub 141 n n P3B O8A COA sing 142 n n P3B O9A COA sing 143 n n O8A HOA8 COA sing 144 n n O9A HOA9 COA sing 145 n n C4B O4B COA sing 146 n n C4B C5B COA sing 147 n n C4B H4B COA sing 148 n n C5B O5B COA sing 149 n n C5B H51A COA sing 150 n n C5B H52A COA sing 151 n n O5B P1A COA sing 152 n n P1A O1A COA doub 153 n n P1A O2A COA sing 154 n n P1A O3A COA sing 155 n n O2A HOA2 COA sing 156 n n O3A P2A COA sing 157 n n P2A O4A COA doub 158 n n P2A O5A COA sing 159 n n P2A O6A COA sing 160 n n O5A HOA5 COA sing 161 n n O6A CCP COA sing 162 n n CBP CCP COA sing 163 n n CBP CDP COA sing 164 n n CBP CEP COA sing 165 n n CBP CAP COA sing 166 n n CCP H121 COA sing 167 n n CCP H122 COA sing 168 n n CDP H131 COA sing 169 n n CDP H132 COA sing 170 n n CDP H133 COA sing 171 n n CEP H141 COA sing 172 n n CEP H142 COA sing 173 n n CEP H143 COA sing 174 n n CAP OAP COA sing 175 n n CAP C9P COA sing 176 n n CAP H10 COA sing 177 n n OAP HO1 COA sing 178 n n C9P O9P COA doub 179 n n C9P N8P COA sing 180 n n N8P C7P COA sing 181 n n N8P HN8 COA sing 182 n n C7P C6P COA sing 183 n n C7P H71 COA sing 184 n n C7P H72 COA sing 185 n n C6P C5P COA sing 186 n n C6P H61 COA sing 187 n n C6P H62 COA sing 188 n n C5P O5P COA doub 189 n n C5P N4P COA sing 190 n n N4P C3P COA sing 191 n n N4P HN4 COA sing 192 n n C3P C2P COA sing 193 n n C3P H31 COA sing 194 n n C3P H32 COA sing 195 n n C2P S1P COA sing 196 n n C2P H21 COA sing 197 n n C2P H22 COA sing 198 n n S1P HS1 COA sing 199 n n # _atom_sites.entry_id 8BIT _atom_sites.fract_transf_matrix[1][1] 0.009451 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.000185 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.010731 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007595 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 6R9 B 1 601 601 6R9 6R9 . D 3 COA B 1 602 602 COA COA . E 2 6R9 A 1 601 601 6R9 6R9 . F 3 COA A 1 602 602 COA COA . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1A COA . . . F 3 50.176 15.42 43.137 1 133.56 ? N1A COA 602 A 1 HETATM 2 C C2A COA . . . F 3 50.879 14.328 42.804 1 117.06 ? C2A COA 602 A 1 HETATM 3 N N3A COA . . . F 3 50.454 13.217 42.21 1 100.3 ? N3A COA 602 A 1 HETATM 4 C C4A COA . . . F 3 49.138 13.296 41.928 1 91.11 ? C4A COA 602 A 1 HETATM 5 C C5A COA . . . F 3 48.298 14.354 42.173 1 96.92 ? C5A COA 602 A 1 HETATM 6 C C6A COA . . . F 3 48.853 15.47 42.832 1 125.25 ? C6A COA 602 A 1 HETATM 7 N N6A COA . . . F 3 48.161 16.564 43.145 1 134.21 ? N6A COA 602 A 1 HETATM 8 N N7A COA . . . F 3 47.017 14.058 41.721 1 84.11 ? N7A COA 602 A 1 HETATM 9 C C8A COA . . . F 3 47.096 12.836 41.252 1 80.07 ? C8A COA 602 A 1 HETATM 10 N N9A COA . . . F 3 48.346 12.342 41.345 1 85.85 ? N9A COA 602 A 1 HETATM 11 C C1B COA . . . F 3 48.775 11.068 40.863 1 105.19 ? C1B COA 602 A 1 HETATM 12 C C2B COA . . . F 3 49.541 10.206 41.869 1 107.39 ? C2B COA 602 A 1 HETATM 13 O O2B COA . . . F 3 50.937 10.431 41.86 1 136.97 ? O2B COA 602 A 1 HETATM 14 C C3B COA . . . F 3 49.17 8.815 41.344 1 115.33 ? C3B COA 602 A 1 HETATM 15 O O3B COA . . . F 3 49.786 8.516 40.071 1 143.32 ? O3B COA 602 A 1 HETATM 16 P P3B COA . . . F 3 49.178 7.351 39.102 1 125.71 ? P3B COA 602 A 1 HETATM 17 O O7A COA . . . F 3 50.338 6.944 38.162 1 107.78 ? O7A COA 602 A 1 HETATM 18 O O8A COA . . . F 3 47.928 7.89 38.359 1 113.65 ? O8A COA 602 A 1 HETATM 19 O O9A COA . . . F 3 48.82 6.25 40.072 1 127.71 ? O9A COA 602 A 1 HETATM 20 C C4B COA . . . F 3 47.689 9.053 41.189 1 106.58 ? C4B COA 602 A 1 HETATM 21 O O4B COA . . . F 3 47.627 10.33 40.505 1 109.49 ? O4B COA 602 A 1 HETATM 22 C C5B COA . . . F 3 46.943 9.15 42.489 1 96.36 ? C5B COA 602 A 1 HETATM 23 O O5B COA . . . F 3 45.648 9.725 42.234 1 89.6 ? O5B COA 602 A 1 HETATM 24 P P1A COA . . . F 3 44.437 8.732 41.903 1 74.19 ? P1A COA 602 A 1 HETATM 25 O O1A COA . . . F 3 44.782 7.819 40.77 1 93.03 ? O1A COA 602 A 1 HETATM 26 O O2A COA . . . F 3 43.196 9.555 41.816 1 76.93 ? O2A COA 602 A 1 HETATM 27 O O3A COA . . . F 3 44.411 7.839 43.232 1 90.97 ? O3A COA 602 A 1 HETATM 28 P P2A COA . . . F 3 45.076 6.475 43.761 1 92.74 ? P2A COA 602 A 1 HETATM 29 O O4A COA . . . F 3 45.496 5.606 42.636 1 100.73 ? O4A COA 602 A 1 HETATM 30 O O5A COA . . . F 3 46.116 6.781 44.793 1 97.32 ? O5A COA 602 A 1 HETATM 31 O O6A COA . . . F 3 43.769 5.837 44.456 1 103.02 ? O6A COA 602 A 1 HETATM 32 C CBP COA . . . F 3 41.581 6.873 45.008 1 78.96 ? CBP COA 602 A 1 HETATM 33 C CCP COA . . . F 3 42.422 6.131 43.956 1 88.7 ? CCP COA 602 A 1 HETATM 34 C CDP COA . . . F 3 40.142 6.34 44.938 1 78.68 ? CDP COA 602 A 1 HETATM 35 C CEP COA . . . F 3 42.131 6.622 46.417 1 73.86 ? CEP COA 602 A 1 HETATM 36 C CAP COA . . . F 3 41.592 8.38 44.75 1 75.89 ? CAP COA 602 A 1 HETATM 37 O OAP COA . . . F 3 41.423 8.604 43.374 1 80.03 ? OAP COA 602 A 1 HETATM 38 C C9P COA . . . F 3 40.528 9.209 45.426 1 84.54 ? C9P COA 602 A 1 HETATM 39 O O9P COA . . . F 3 40.554 9.385 46.642 1 98.61 ? O9P COA 602 A 1 HETATM 40 N N8P COA . . . F 3 39.576 9.665 44.624 1 83.87 ? N8P COA 602 A 1 HETATM 41 C C7P COA . . . F 3 38.827 10.892 44.875 1 87.74 ? C7P COA 602 A 1 HETATM 42 C C6P COA . . . F 3 37.595 10.722 45.76 1 88.39 ? C6P COA 602 A 1 HETATM 43 C C5P COA . . . F 3 36.735 11.97 45.796 1 91.22 ? C5P COA 602 A 1 HETATM 44 O O5P COA . . . F 3 36.599 12.638 46.828 1 93.9 ? O5P COA 602 A 1 HETATM 45 N N4P COA . . . F 3 36.195 12.324 44.617 1 97.71 ? N4P COA 602 A 1 HETATM 46 C C3P COA . . . F 3 35.013 13.157 44.474 1 107.6 ? C3P COA 602 A 1 HETATM 47 C C2P COA . . . F 3 33.774 12.422 44.942 1 117.57 ? C2P COA 602 A 1 HETATM 48 S S1P COA . . . F 3 32.566 13.519 45.728 1 140.05 ? S1P COA 602 A 1 # _model_server_stats.io_time_ms 24 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 18 _model_server_stats.query_time_ms 311 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 48 #