data_8BJC # _model_server_result.job_id jdeab-m9BnJxzKSIq-tzOQ _model_server_result.datetime_utc '2024-11-21 17:15:34' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8bjc # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":304}' # _entry.id 8BJC # _exptl.entry_id 8BJC _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 238.305 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 8BJC _cell.length_a 77.773 _cell.length_b 77.773 _cell.length_c 103.789 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8BJC _symmetry.cell_setting ? _symmetry.Int_Tables_number 96 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 43 21 2' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 C N N ? 3 E N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OE1 GLU 158 B GLU 164 1_555 F ZN ZN . B ZN 305 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.64 ? metalc ? metalc2 A OE2 GLU 158 B GLU 164 1_555 F ZN ZN . B ZN 305 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.78 ? metalc ? metalc3 A NE2 HIS 199 B HIS 205 1_555 F ZN ZN . B ZN 305 3_454 ? ? ? ? ? ? ? ? ? ? ? ? 2.226 ? metalc ? metalc4 F ZN ZN . B ZN 305 1_555 G O HOH . B HOH 470 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.941 ? # _chem_comp.formula 'C8 H18 N2 O4 S' _chem_comp.formula_weight 238.305 _chem_comp.id EPE _chem_comp.mon_nstd_flag . _chem_comp.name '4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms HEPES # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N1 C2 EPE sing 70 n n N1 C6 EPE sing 71 n n N1 C9 EPE sing 72 n n C2 C3 EPE sing 73 n n C2 H21 EPE sing 74 n n C2 H22 EPE sing 75 n n C3 N4 EPE sing 76 n n C3 H31 EPE sing 77 n n C3 H32 EPE sing 78 n n N4 C5 EPE sing 79 n n N4 C7 EPE sing 80 n n C5 C6 EPE sing 81 n n C5 H51 EPE sing 82 n n C5 H52 EPE sing 83 n n C6 H61 EPE sing 84 n n C6 H62 EPE sing 85 n n C7 C8 EPE sing 86 n n C7 H71 EPE sing 87 n n C7 H72 EPE sing 88 n n C8 O8 EPE sing 89 n n C8 H81 EPE sing 90 n n C8 H82 EPE sing 91 n n O8 HO8 EPE sing 92 n n C9 C10 EPE sing 93 n n C9 H91 EPE sing 94 n n C9 H92 EPE sing 95 n n C10 S EPE sing 96 n n C10 H101 EPE sing 97 n n C10 H102 EPE sing 98 n n S O1S EPE doub 99 n n S O2S EPE doub 100 n n S O3S EPE sing 101 n n O3S HOS3 EPE sing 102 n n # _atom_sites.entry_id 8BJC _atom_sites.fract_transf_matrix[1][1] 0.012858 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012858 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009635 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 GOL B 1 301 306 GOL GOL . C 3 EPE B 1 302 308 EPE EPE . D 4 MES B 1 303 309 MES MES . E 3 EPE B 1 304 310 EPE EPE . F 5 ZN B 1 305 1 ZN ZN . G 6 HOH B 1 401 112 HOH HOH . G 6 HOH B 2 402 72 HOH HOH . G 6 HOH B 3 403 28 HOH HOH . G 6 HOH B 4 404 119 HOH HOH . G 6 HOH B 5 405 82 HOH HOH . G 6 HOH B 6 406 46 HOH HOH . G 6 HOH B 7 407 124 HOH HOH . G 6 HOH B 8 408 48 HOH HOH . G 6 HOH B 9 409 42 HOH HOH . G 6 HOH B 10 410 41 HOH HOH . G 6 HOH B 11 411 11 HOH HOH . G 6 HOH B 12 412 3 HOH HOH . G 6 HOH B 13 413 4 HOH HOH . G 6 HOH B 14 414 30 HOH HOH . G 6 HOH B 15 415 127 HOH HOH . G 6 HOH B 16 416 12 HOH HOH . G 6 HOH B 17 417 43 HOH HOH . G 6 HOH B 18 418 2 HOH HOH . G 6 HOH B 19 419 34 HOH HOH . G 6 HOH B 20 420 59 HOH HOH . G 6 HOH B 21 421 77 HOH HOH . G 6 HOH B 22 422 6 HOH HOH . G 6 HOH B 23 423 114 HOH HOH . G 6 HOH B 24 424 38 HOH HOH . G 6 HOH B 25 425 50 HOH HOH . G 6 HOH B 26 426 16 HOH HOH . G 6 HOH B 27 427 63 HOH HOH . G 6 HOH B 28 428 22 HOH HOH . G 6 HOH B 29 429 142 HOH HOH . G 6 HOH B 30 430 27 HOH HOH . G 6 HOH B 31 431 25 HOH HOH . G 6 HOH B 32 432 8 HOH HOH . G 6 HOH B 33 433 81 HOH HOH . G 6 HOH B 34 434 1 HOH HOH . G 6 HOH B 35 435 139 HOH HOH . G 6 HOH B 36 436 75 HOH HOH . G 6 HOH B 37 437 23 HOH HOH . G 6 HOH B 38 438 64 HOH HOH . G 6 HOH B 39 439 20 HOH HOH . G 6 HOH B 40 440 76 HOH HOH . G 6 HOH B 41 441 17 HOH HOH . G 6 HOH B 42 442 69 HOH HOH . G 6 HOH B 43 443 47 HOH HOH . G 6 HOH B 44 444 36 HOH HOH . G 6 HOH B 45 445 150 HOH HOH . G 6 HOH B 46 446 40 HOH HOH . G 6 HOH B 47 447 19 HOH HOH . G 6 HOH B 48 448 52 HOH HOH . G 6 HOH B 49 449 85 HOH HOH . G 6 HOH B 50 450 136 HOH HOH . G 6 HOH B 51 451 9 HOH HOH . G 6 HOH B 52 452 143 HOH HOH . G 6 HOH B 53 453 5 HOH HOH . G 6 HOH B 54 454 104 HOH HOH . G 6 HOH B 55 455 18 HOH HOH . G 6 HOH B 56 456 49 HOH HOH . G 6 HOH B 57 457 15 HOH HOH . G 6 HOH B 58 458 7 HOH HOH . G 6 HOH B 59 459 24 HOH HOH . G 6 HOH B 60 460 26 HOH HOH . G 6 HOH B 61 461 39 HOH HOH . G 6 HOH B 62 462 29 HOH HOH . G 6 HOH B 63 463 54 HOH HOH . G 6 HOH B 64 464 110 HOH HOH . G 6 HOH B 65 465 31 HOH HOH . G 6 HOH B 66 466 53 HOH HOH . G 6 HOH B 67 467 87 HOH HOH . G 6 HOH B 68 468 37 HOH HOH . G 6 HOH B 69 469 152 HOH HOH . G 6 HOH B 70 470 55 HOH HOH . G 6 HOH B 71 471 90 HOH HOH . G 6 HOH B 72 472 10 HOH HOH . G 6 HOH B 73 473 103 HOH HOH . G 6 HOH B 74 474 109 HOH HOH . G 6 HOH B 75 475 117 HOH HOH . G 6 HOH B 76 476 62 HOH HOH . G 6 HOH B 77 477 61 HOH HOH . G 6 HOH B 78 478 153 HOH HOH . G 6 HOH B 79 479 21 HOH HOH . G 6 HOH B 80 480 120 HOH HOH . G 6 HOH B 81 481 148 HOH HOH . G 6 HOH B 82 482 115 HOH HOH . G 6 HOH B 83 483 95 HOH HOH . G 6 HOH B 84 484 149 HOH HOH . G 6 HOH B 85 485 131 HOH HOH . G 6 HOH B 86 486 101 HOH HOH . G 6 HOH B 87 487 13 HOH HOH . G 6 HOH B 88 488 65 HOH HOH . G 6 HOH B 89 489 126 HOH HOH . G 6 HOH B 90 490 68 HOH HOH . G 6 HOH B 91 491 99 HOH HOH . G 6 HOH B 92 492 98 HOH HOH . G 6 HOH B 93 493 144 HOH HOH . G 6 HOH B 94 494 106 HOH HOH . G 6 HOH B 95 495 14 HOH HOH . G 6 HOH B 96 496 125 HOH HOH . G 6 HOH B 97 497 84 HOH HOH . G 6 HOH B 98 498 147 HOH HOH . G 6 HOH B 99 499 113 HOH HOH . G 6 HOH B 100 500 51 HOH HOH . G 6 HOH B 101 501 93 HOH HOH . G 6 HOH B 102 502 146 HOH HOH . G 6 HOH B 103 503 151 HOH HOH . G 6 HOH B 104 504 133 HOH HOH . G 6 HOH B 105 505 88 HOH HOH . G 6 HOH B 106 506 67 HOH HOH . G 6 HOH B 107 507 145 HOH HOH . G 6 HOH B 108 508 35 HOH HOH . G 6 HOH B 109 509 135 HOH HOH . G 6 HOH B 110 510 105 HOH HOH . G 6 HOH B 111 511 108 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 EPE . . . E 3 -28.217 -0.434 -11.383 0.5 20 ? N1 EPE 304 B 1 HETATM 2 C C2 EPE . . . E 3 -28.337 -0.095 -9.962 0.5 20 ? C2 EPE 304 B 1 HETATM 3 C C3 EPE . . . E 3 -27.241 -0.709 -9.131 0.5 20 ? C3 EPE 304 B 1 HETATM 4 N N4 EPE . . . E 3 -27.207 -2.158 -9.286 0.5 20 ? N4 EPE 304 B 1 HETATM 5 C C5 EPE . . . E 3 -26.958 -2.472 -10.704 0.5 20 ? C5 EPE 304 B 1 HETATM 6 C C6 EPE . . . E 3 -28.001 -1.865 -11.612 0.5 20 ? C6 EPE 304 B 1 HETATM 7 C C7 EPE . . . E 3 -26.212 -2.692 -8.344 0.5 20 ? C7 EPE 304 B 1 HETATM 8 C C8 EPE . . . E 3 -25.353 -3.851 -8.808 0.5 20 ? C8 EPE 304 B 1 HETATM 9 O O8 EPE . . . E 3 -26.116 -5.016 -9.042 0.5 20 ? O8 EPE 304 B 1 HETATM 10 C C9 EPE . . . E 3 -27.361 0.459 -12.178 0.5 20 ? C9 EPE 304 B 1 HETATM 11 C C10 EPE . . . E 3 -25.856 0.365 -11.965 0.5 20 ? C10 EPE 304 B 1 HETATM 12 S S EPE . . . E 3 -25.17 1.935 -11.547 0.5 20 ? S EPE 304 B 1 HETATM 13 O O1S EPE . . . E 3 -25.47 2.777 -12.664 0.5 20 ? O1S EPE 304 B 1 HETATM 14 O O2S EPE . . . E 3 -23.795 1.714 -11.207 0.5 20 ? O2S EPE 304 B 1 HETATM 15 O O3S EPE . . . E 3 -25.933 2.387 -10.287 0.5 20 ? O3S EPE 304 B 1 HETATM 16 H H21 EPE . . . E 3 -28.312 0.877 -9.86 0.5 20 ? H21 EPE 304 B 1 HETATM 17 H H22 EPE . . . E 3 -29.201 -0.41 -9.631 0.5 20 ? H22 EPE 304 B 1 HETATM 18 H H31 EPE . . . E 3 -27.39 -0.493 -8.191 0.5 20 ? H31 EPE 304 B 1 HETATM 19 H H32 EPE . . . E 3 -26.378 -0.333 -9.388 0.5 20 ? H32 EPE 304 B 1 HETATM 20 H H51 EPE . . . E 3 -26.975 -3.44 -10.831 0.5 20 ? H51 EPE 304 B 1 HETATM 21 H H52 EPE . . . E 3 -26.071 -2.156 -10.959 0.5 20 ? H52 EPE 304 B 1 HETATM 22 H H61 EPE . . . E 3 -27.725 -1.99 -12.539 0.5 20 ? H61 EPE 304 B 1 HETATM 23 H H62 EPE . . . E 3 -28.848 -2.338 -11.488 0.5 20 ? H62 EPE 304 B 1 HETATM 24 H H71 EPE . . . E 3 -26.686 -2.969 -7.536 0.5 20 ? H71 EPE 304 B 1 HETATM 25 H H72 EPE . . . E 3 -25.62 -1.959 -8.088 0.5 20 ? H72 EPE 304 B 1 HETATM 26 H H81 EPE . . . E 3 -24.688 -4.043 -8.119 0.5 20 ? H81 EPE 304 B 1 HETATM 27 H H82 EPE . . . E 3 -24.874 -3.601 -9.622 0.5 20 ? H82 EPE 304 B 1 HETATM 28 H HO8 EPE . . . E 3 -26.192 -5.147 -9.874 0.5 20 ? HO8 EPE 304 B 1 HETATM 29 H H91 EPE . . . E 3 -27.639 1.377 -12.001 0.5 20 ? H91 EPE 304 B 1 HETATM 30 H H92 EPE . . . E 3 -27.543 0.285 -13.12 0.5 20 ? H92 EPE 304 B 1 HETATM 31 H H101 EPE . . . E 3 -25.435 0.039 -12.78 0.5 20 ? H101 EPE 304 B 1 HETATM 32 H H102 EPE . . . E 3 -25.656 -0.252 -11.261 0.5 20 ? H102 EPE 304 B 1 HETATM 33 H HOS3 EPE . . . E 3 -26.071 1.76 -9.798 0.5 20 ? HOS3 EPE 304 B 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 273 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 33 #