data_8BJE
#
_model_server_result.job_id            4IJF-Rt5noJJJA7SW8xLQg 
_model_server_result.datetime_utc      '2024-11-21 23:10:51' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          8bje 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"B","auth_seq_id":201}' 
#
_entry.id    8BJE 
#
_exptl.entry_id    8BJE 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              92.094 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            GLYCEROL 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            8BJE 
_cell.length_a            52.951 
_cell.length_b            52.951 
_cell.length_c            73.146 
_cell.Z_PDB               6 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 8BJE 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        152 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 31 2 1' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 B N N 
? 2 C N N 
#
_chem_comp.formula           'C3 H8 O3' 
_chem_comp.formula_weight    92.094 
_chem_comp.id                GOL 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              GLYCEROL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     GLYCERIN;PROPANE-1,2,3-TRIOL 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 GOL sing 116 n n 
C1 C2 GOL sing 117 n n 
C1 H11 GOL sing 118 n n 
C1 H12 GOL sing 119 n n 
O1 HO1 GOL sing 120 n n 
C2 O2 GOL sing 121 n n 
C2 C3 GOL sing 122 n n 
C2 H2 GOL sing 123 n n 
O2 HO2 GOL sing 124 n n 
C3 O3 GOL sing 125 n n 
C3 H31 GOL sing 126 n n 
C3 H32 GOL sing 127 n n 
O3 HO3 GOL sing 128 n n 
#
_atom_sites.entry_id                     8BJE 
_atom_sites.fract_transf_matrix[1][1]    0.018885 
_atom_sites.fract_transf_matrix[1][2]    0.010903 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.021807 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.013671 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 GOL A 1 201 202 GOL GOL . 
C 2 GOL A 1 202 203 GOL GOL . 
D 3 WRL A 1 203 208 WRL LIG . 
E 4 HOH A 1 301 5 HOH HOH . 
E 4 HOH A 2 302 54 HOH HOH . 
E 4 HOH A 3 303 39 HOH HOH . 
E 4 HOH A 4 304 15 HOH HOH . 
E 4 HOH A 5 305 8 HOH HOH . 
E 4 HOH A 6 306 31 HOH HOH . 
E 4 HOH A 7 307 27 HOH HOH . 
E 4 HOH A 8 308 6 HOH HOH . 
E 4 HOH A 9 309 11 HOH HOH . 
E 4 HOH A 10 310 13 HOH HOH . 
E 4 HOH A 11 311 33 HOH HOH . 
E 4 HOH A 12 312 24 HOH HOH . 
E 4 HOH A 13 313 35 HOH HOH . 
E 4 HOH A 14 314 26 HOH HOH . 
E 4 HOH A 15 315 30 HOH HOH . 
E 4 HOH A 16 316 21 HOH HOH . 
E 4 HOH A 17 317 23 HOH HOH . 
E 4 HOH A 18 318 20 HOH HOH . 
E 4 HOH A 19 319 1 HOH HOH . 
E 4 HOH A 20 320 2 HOH HOH . 
E 4 HOH A 21 321 41 HOH HOH . 
E 4 HOH A 22 322 53 HOH HOH . 
E 4 HOH A 23 323 37 HOH HOH . 
E 4 HOH A 24 324 18 HOH HOH . 
E 4 HOH A 25 325 62 HOH HOH . 
E 4 HOH A 26 326 22 HOH HOH . 
E 4 HOH A 27 327 14 HOH HOH . 
E 4 HOH A 28 328 34 HOH HOH . 
E 4 HOH A 29 329 4 HOH HOH . 
E 4 HOH A 30 330 52 HOH HOH . 
E 4 HOH A 31 331 7 HOH HOH . 
E 4 HOH A 32 332 58 HOH HOH . 
E 4 HOH A 33 333 3 HOH HOH . 
E 4 HOH A 34 334 55 HOH HOH . 
E 4 HOH A 35 335 36 HOH HOH . 
E 4 HOH A 36 336 38 HOH HOH . 
E 4 HOH A 37 337 9 HOH HOH . 
E 4 HOH A 38 338 10 HOH HOH . 
E 4 HOH A 39 339 12 HOH HOH . 
E 4 HOH A 40 340 48 HOH HOH . 
E 4 HOH A 41 341 16 HOH HOH . 
E 4 HOH A 42 342 19 HOH HOH . 
E 4 HOH A 43 343 56 HOH HOH . 
E 4 HOH A 44 344 61 HOH HOH . 
E 4 HOH A 45 345 43 HOH HOH . 
E 4 HOH A 46 346 50 HOH HOH . 
E 4 HOH A 47 347 46 HOH HOH . 
E 4 HOH A 48 348 49 HOH HOH . 
E 4 HOH A 49 349 51 HOH HOH . 
E 4 HOH A 50 350 57 HOH HOH . 
E 4 HOH A 51 351 29 HOH HOH . 
E 4 HOH A 52 352 47 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 GOL . . . B 2 11.046 13.594 -6.571 1 52.49 ? C1 GOL 201 A 1 
HETATM 2 O O1 GOL . . . B 2 11.568 14.121 -5.291 1 53.71 ? O1 GOL 201 A 1 
HETATM 3 C C2 GOL . . . B 2 10.394 14.743 -7.256 1 50.08 ? C2 GOL 201 A 1 
HETATM 4 O O2 GOL . . . B 2 11.382 15.575 -7.792 1 49.44 ? O2 GOL 201 A 1 
HETATM 5 C C3 GOL . . . B 2 9.573 14.123 -8.402 1 48.7 ? C3 GOL 201 A 1 
HETATM 6 O O3 GOL . . . B 2 10.456 13.342 -9.16 1 47.59 ? O3 GOL 201 A 1 
#
_model_server_stats.io_time_ms              11 
_model_server_stats.parse_time_ms           10 
_model_server_stats.create_model_time_ms    5 
_model_server_stats.query_time_ms           266 
_model_server_stats.encode_time_ms          3 
_model_server_stats.element_count           6 
#