data_8BK5
#
_model_server_result.job_id            7TvMCMeo26ehUGh1nrHHsA 
_model_server_result.datetime_utc      '2024-11-21 22:06:56' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          8bk5 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":203}' 
#
_entry.id    8BK5 
#
_exptl.entry_id    8BK5 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              22.99 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'SODIUM ION' 
_entity.pdbx_number_of_molecules    3 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            8BK5 
_cell.length_a            53.54 
_cell.length_b            53.54 
_cell.length_c            77.36 
_cell.Z_PDB               6 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 8BK5 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        152 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 31 2 1' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 C N N 
? 3 D N N 
? 3 E N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A OD1 ASN 7 A ASN 7 1_555 C NA NA . A NA 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.797 ? 
metalc ? metalc2 A O GLY 95 A GLY 95 1_555 D NA NA . A NA 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.677 ? 
metalc ? metalc3 A OG1 THR 97 A THR 97 1_555 D NA NA . A NA 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.77 ? 
metalc ? metalc4 C NA NA . A NA 202 1_555 F O HOH . A HOH 315 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.999 ? 
metalc ? metalc5 C NA NA . A NA 202 1_555 F O HOH . A HOH 338 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.766 ? 
metalc ? metalc6 C NA NA . A NA 202 1_555 F O HOH . A HOH 387 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.854 ? 
metalc ? metalc7 D NA NA . A NA 203 1_555 F O HOH . A HOH 384 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.759 ? 
#
_chem_comp.formula           'Na 1' 
_chem_comp.formula_weight    22.99 
_chem_comp.id                NA 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'SODIUM ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
_atom_sites.entry_id                     8BK5 
_atom_sites.fract_transf_matrix[1][1]    0.018678 
_atom_sites.fract_transf_matrix[1][2]    0.010784 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.021567 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.012927 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 9QN A 1 201 201 9QN 9QN . 
C 3 NA A 1 202 1 NA NA . 
D 3 NA A 1 203 2 NA NA . 
E 3 NA A 1 204 3 NA NA . 
F 4 HOH A 1 301 2 HOH HOH . 
F 4 HOH A 2 302 7 HOH HOH . 
F 4 HOH A 3 303 23 HOH HOH . 
F 4 HOH A 4 304 16 HOH HOH . 
F 4 HOH A 5 305 9 HOH HOH . 
F 4 HOH A 6 306 6 HOH HOH . 
F 4 HOH A 7 307 15 HOH HOH . 
F 4 HOH A 8 308 22 HOH HOH . 
F 4 HOH A 9 309 42 HOH HOH . 
F 4 HOH A 10 310 19 HOH HOH . 
F 4 HOH A 11 311 18 HOH HOH . 
F 4 HOH A 12 312 160 HOH HOH . 
F 4 HOH A 13 313 17 HOH HOH . 
F 4 HOH A 14 314 20 HOH HOH . 
F 4 HOH A 15 315 79 HOH HOH . 
F 4 HOH A 16 316 133 HOH HOH . 
F 4 HOH A 17 317 4 HOH HOH . 
F 4 HOH A 18 318 29 HOH HOH . 
F 4 HOH A 19 319 8 HOH HOH . 
F 4 HOH A 20 320 24 HOH HOH . 
F 4 HOH A 21 321 1 HOH HOH . 
F 4 HOH A 22 322 41 HOH HOH . 
F 4 HOH A 23 323 14 HOH HOH . 
F 4 HOH A 24 324 112 HOH HOH . 
F 4 HOH A 25 325 33 HOH HOH . 
F 4 HOH A 26 326 31 HOH HOH . 
F 4 HOH A 27 327 134 HOH HOH . 
F 4 HOH A 28 328 21 HOH HOH . 
F 4 HOH A 29 329 36 HOH HOH . 
F 4 HOH A 30 330 32 HOH HOH . 
F 4 HOH A 31 331 51 HOH HOH . 
F 4 HOH A 32 332 57 HOH HOH . 
F 4 HOH A 33 333 12 HOH HOH . 
F 4 HOH A 34 334 70 HOH HOH . 
F 4 HOH A 35 335 28 HOH HOH . 
F 4 HOH A 36 336 39 HOH HOH . 
F 4 HOH A 37 337 45 HOH HOH . 
F 4 HOH A 38 338 44 HOH HOH . 
F 4 HOH A 39 339 25 HOH HOH . 
F 4 HOH A 40 340 40 HOH HOH . 
F 4 HOH A 41 341 35 HOH HOH . 
F 4 HOH A 42 342 52 HOH HOH . 
F 4 HOH A 43 343 13 HOH HOH . 
F 4 HOH A 44 344 161 HOH HOH . 
F 4 HOH A 45 345 27 HOH HOH . 
F 4 HOH A 46 346 146 HOH HOH . 
F 4 HOH A 47 347 38 HOH HOH . 
F 4 HOH A 48 348 54 HOH HOH . 
F 4 HOH A 49 349 58 HOH HOH . 
F 4 HOH A 50 350 76 HOH HOH . 
F 4 HOH A 51 351 34 HOH HOH . 
F 4 HOH A 52 352 62 HOH HOH . 
F 4 HOH A 53 353 151 HOH HOH . 
F 4 HOH A 54 354 60 HOH HOH . 
F 4 HOH A 55 355 5 HOH HOH . 
F 4 HOH A 56 356 49 HOH HOH . 
F 4 HOH A 57 357 56 HOH HOH . 
F 4 HOH A 58 358 47 HOH HOH . 
F 4 HOH A 59 359 48 HOH HOH . 
F 4 HOH A 60 360 65 HOH HOH . 
F 4 HOH A 61 361 115 HOH HOH . 
F 4 HOH A 62 362 46 HOH HOH . 
F 4 HOH A 63 363 64 HOH HOH . 
F 4 HOH A 64 364 68 HOH HOH . 
F 4 HOH A 65 365 66 HOH HOH . 
F 4 HOH A 66 366 53 HOH HOH . 
F 4 HOH A 67 367 143 HOH HOH . 
F 4 HOH A 68 368 71 HOH HOH . 
F 4 HOH A 69 369 37 HOH HOH . 
F 4 HOH A 70 370 55 HOH HOH . 
F 4 HOH A 71 371 73 HOH HOH . 
F 4 HOH A 72 372 63 HOH HOH . 
F 4 HOH A 73 373 69 HOH HOH . 
F 4 HOH A 74 374 75 HOH HOH . 
F 4 HOH A 75 375 140 HOH HOH . 
F 4 HOH A 76 376 141 HOH HOH . 
F 4 HOH A 77 377 74 HOH HOH . 
F 4 HOH A 78 378 72 HOH HOH . 
F 4 HOH A 79 379 158 HOH HOH . 
F 4 HOH A 80 380 78 HOH HOH . 
F 4 HOH A 81 381 59 HOH HOH . 
F 4 HOH A 82 382 80 HOH HOH . 
F 4 HOH A 83 383 152 HOH HOH . 
F 4 HOH A 84 384 86 HOH HOH . 
F 4 HOH A 85 385 85 HOH HOH . 
F 4 HOH A 86 386 84 HOH HOH . 
F 4 HOH A 87 387 89 HOH HOH . 
F 4 HOH A 88 388 138 HOH HOH . 
F 4 HOH A 89 389 82 HOH HOH . 
F 4 HOH A 90 390 83 HOH HOH . 
F 4 HOH A 91 391 127 HOH HOH . 
F 4 HOH A 92 392 117 HOH HOH . 
F 4 HOH A 93 393 105 HOH HOH . 
F 4 HOH A 94 394 88 HOH HOH . 
F 4 HOH A 95 395 97 HOH HOH . 
F 4 HOH A 96 396 87 HOH HOH . 
F 4 HOH A 97 397 149 HOH HOH . 
F 4 HOH A 98 398 159 HOH HOH . 
F 4 HOH A 99 399 165 HOH HOH . 
F 4 HOH A 100 400 164 HOH HOH . 
F 4 HOH A 101 401 148 HOH HOH . 
F 4 HOH A 102 402 156 HOH HOH . 
F 4 HOH A 103 403 116 HOH HOH . 
F 4 HOH A 104 404 91 HOH HOH . 
F 4 HOH A 105 405 94 HOH HOH . 
F 4 HOH A 106 406 92 HOH HOH . 
F 4 HOH A 107 407 98 HOH HOH . 
F 4 HOH A 108 408 96 HOH HOH . 
F 4 HOH A 109 409 93 HOH HOH . 
F 4 HOH A 110 410 157 HOH HOH . 
F 4 HOH A 111 411 144 HOH HOH . 
F 4 HOH A 112 412 121 HOH HOH . 
F 4 HOH A 113 413 101 HOH HOH . 
F 4 HOH A 114 414 100 HOH HOH . 
F 4 HOH A 115 415 95 HOH HOH . 
F 4 HOH A 116 416 104 HOH HOH . 
F 4 HOH A 117 417 90 HOH HOH . 
F 4 HOH A 118 418 103 HOH HOH . 
F 4 HOH A 119 419 99 HOH HOH . 
F 4 HOH A 120 420 155 HOH HOH . 
F 4 HOH A 121 421 106 HOH HOH . 
F 4 HOH A 122 422 102 HOH HOH . 
F 4 HOH A 123 423 107 HOH HOH . 
F 4 HOH A 124 424 162 HOH HOH . 
F 4 HOH A 125 425 108 HOH HOH . 
F 4 HOH A 126 426 109 HOH HOH . 
F 4 HOH A 127 427 150 HOH HOH . 
F 4 HOH A 128 428 122 HOH HOH . 
F 4 HOH A 129 429 136 HOH HOH . 
F 4 HOH A 130 430 110 HOH HOH . 
F 4 HOH A 131 431 111 HOH HOH . 
F 4 HOH A 132 432 118 HOH HOH . 
F 4 HOH A 133 433 124 HOH HOH . 
F 4 HOH A 134 434 113 HOH HOH . 
F 4 HOH A 135 435 153 HOH HOH . 
#
_atom_site.group_PDB             HETATM 
_atom_site.id                    1 
_atom_site.type_symbol           NA 
_atom_site.label_atom_id         NA 
_atom_site.label_comp_id         NA 
_atom_site.label_seq_id          . 
_atom_site.label_alt_id          . 
_atom_site.pdbx_PDB_ins_code     . 
_atom_site.label_asym_id         D 
_atom_site.label_entity_id       3 
_atom_site.Cartn_x               -22.122 
_atom_site.Cartn_y               34.258 
_atom_site.Cartn_z               -16.724 
_atom_site.occupancy             1 
_atom_site.B_iso_or_equiv        27.05 
_atom_site.pdbx_formal_charge    ? 
_atom_site.auth_atom_id          NA 
_atom_site.auth_comp_id          NA 
_atom_site.auth_seq_id           203 
_atom_site.auth_asym_id          A 
_atom_site.pdbx_PDB_model_num    1 
#
_model_server_stats.io_time_ms              11 
_model_server_stats.parse_time_ms           21 
_model_server_stats.create_model_time_ms    14 
_model_server_stats.query_time_ms           303 
_model_server_stats.encode_time_ms          6 
_model_server_stats.element_count           1 
#