data_8BLP
#
_model_server_result.job_id            VR37IKkJ1IkC-BJumhj-1Q 
_model_server_result.datetime_utc      '2024-10-20 03:41:35' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          8blp 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"VA","auth_seq_id":401}' 
#
_entry.id    8BLP 
#
_exptl.entry_id    8BLP 
_exptl.method      'ELECTRON MICROSCOPY' 
#
_entity.details                     ? 
_entity.formula_weight              486.726 
_entity.id                          5 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'CHOLESTEROL HEMISUCCINATE' 
_entity.pdbx_number_of_molecules    3 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            8BLP 
_cell.length_a            1 
_cell.length_b            1 
_cell.length_c            1 
_cell.Z_PDB               ? 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 8BLP 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        1 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    trimeric 
_pdbx_struct_assembly.oligomeric_count      3 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA,CA,DA,EA,FA,GA,HA,IA,JA,KA,LA,MA,NA,OA,PA,QA,RA,SA,TA,UA,VA,WA,XA,YA,ZA,AB,BB,CB,DB,EB,FB,GB,HB,IB,JB,KB,LB,MB,NB,OB,PB,QB,RB,SB,TB 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    ? 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 5 X N N 
? 5 Z N N 
? 5 VA N N 
#
_chem_comp.formula           'C31 H50 O4' 
_chem_comp.formula_weight    486.726 
_chem_comp.id                Y01 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'CHOLESTEROL HEMISUCCINATE' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
CAA CBA Y01 sing 638 n n 
CBA CAB Y01 sing 639 n n 
CBA CAN Y01 sing 640 n n 
CAN CAJ Y01 sing 641 n n 
CAJ CAO Y01 sing 642 n n 
CAO CBB Y01 sing 643 n n 
CBB CAC Y01 sing 644 n n 
CBB CBE Y01 sing 645 n n 
CBE CAP Y01 sing 646 n n 
CBE CBI Y01 sing 647 n n 
CAP CAQ Y01 sing 648 n n 
CAQ CBG Y01 sing 649 n n 
CBG CBI Y01 sing 650 n n 
CBG CBD Y01 sing 651 n n 
CBI CAE Y01 sing 652 n n 
CBI CAU Y01 sing 653 n n 
CAU CAS Y01 sing 654 n n 
CAS CBF Y01 sing 655 n n 
CBF CBD Y01 sing 656 n n 
CBF CBH Y01 sing 657 n n 
CBD CAK Y01 sing 658 n n 
CAK CAI Y01 sing 659 n n 
CAI CAZ Y01 doub 660 n n 
CAZ CAV Y01 sing 661 n n 
CAZ CBH Y01 sing 662 n n 
CAV CBC Y01 sing 663 n n 
CBH CAD Y01 sing 664 n n 
CBH CAT Y01 sing 665 n n 
CAT CAR Y01 sing 666 n n 
CAR CBC Y01 sing 667 n n 
CBC OAW Y01 sing 668 n n 
OAW CAY Y01 sing 669 n n 
CAY OAG Y01 doub 670 n n 
CAY CAM Y01 sing 671 n n 
CAM CAL Y01 sing 672 n n 
CAL CAX Y01 sing 673 n n 
CAX OAH Y01 sing 674 n n 
CAX OAF Y01 doub 675 n n 
CAA HAA1 Y01 sing 676 n n 
CAA HAA2 Y01 sing 677 n n 
CAA HAA3 Y01 sing 678 n n 
CBA HBA Y01 sing 679 n n 
CAB HAB1 Y01 sing 680 n n 
CAB HAB2 Y01 sing 681 n n 
CAB HAB3 Y01 sing 682 n n 
CAN HAN1 Y01 sing 683 n n 
CAN HAN2 Y01 sing 684 n n 
CAJ HAJ1 Y01 sing 685 n n 
CAJ HAJ2 Y01 sing 686 n n 
CAO HAO1 Y01 sing 687 n n 
CAO HAO2 Y01 sing 688 n n 
CBB HBB Y01 sing 689 n n 
CAC HAC1 Y01 sing 690 n n 
CAC HAC2 Y01 sing 691 n n 
CAC HAC3 Y01 sing 692 n n 
CBE HBE Y01 sing 693 n n 
CAP HAP1 Y01 sing 694 n n 
CAP HAP2 Y01 sing 695 n n 
CAQ HAQ1 Y01 sing 696 n n 
CAQ HAQ2 Y01 sing 697 n n 
CBG HBG Y01 sing 698 n n 
CBD HBD Y01 sing 699 n n 
CAE HAE1 Y01 sing 700 n n 
CAE HAE2 Y01 sing 701 n n 
CAE HAE3 Y01 sing 702 n n 
CAU HAU1 Y01 sing 703 n n 
CAU HAU2 Y01 sing 704 n n 
CAS HAS1 Y01 sing 705 n n 
CAS HAS2 Y01 sing 706 n n 
CBF HBF Y01 sing 707 n n 
CAK HAK1 Y01 sing 708 n n 
CAK HAK2 Y01 sing 709 n n 
CAI HAI Y01 sing 710 n n 
CAV HAV1 Y01 sing 711 n n 
CAV HAV2 Y01 sing 712 n n 
CBC HBC Y01 sing 713 n n 
CAD HAD1 Y01 sing 714 n n 
CAD HAD2 Y01 sing 715 n n 
CAD HAD3 Y01 sing 716 n n 
CAT HAT1 Y01 sing 717 n n 
CAT HAT2 Y01 sing 718 n n 
CAR HAR1 Y01 sing 719 n n 
CAR HAR2 Y01 sing 720 n n 
CAM HAM1 Y01 sing 721 n n 
CAM HAM2 Y01 sing 722 n n 
CAL HAL1 Y01 sing 723 n n 
CAL HAL2 Y01 sing 724 n n 
OAH HAH Y01 sing 725 n n 
#
_atom_sites.entry_id                     8BLP 
_atom_sites.fract_transf_matrix[1][1]    1 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    1 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    1 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
D 2 PTY A 1 401 502 PTY PTY . 
E 3 LMT A 1 402 503 LMT LMT . 
F 3 LMT A 1 403 504 LMT LMT . 
G 3 LMT A 1 404 505 LMT LMT . 
H 3 LMT A 1 405 506 LMT LMT . 
I 3 LMT A 1 406 507 LMT LMT . 
J 2 PTY A 1 407 508 PTY PTY . 
K 3 LMT A 1 408 511 LMT LMT . 
L 3 LMT A 1 409 512 LMT LMT . 
M 3 LMT A 1 410 513 LMT LMT . 
N 3 LMT A 1 411 514 LMT LMT . 
O 3 LMT A 1 412 515 LMT LMT . 
P 3 LMT A 1 413 516 LMT LMT . 
Q 3 LMT A 1 414 517 LMT LMT . 
R 3 LMT A 1 415 518 LMT LMT . 
S 3 LMT A 1 416 519 LMT LMT . 
T 3 LMT A 1 417 520 LMT LMT . 
U 3 LMT A 1 418 521 LMT LMT . 
V 4 5D3 A 1 419 701 5D3 B14 . 
W 4 5D3 A 1 420 702 5D3 B14 . 
X 5 Y01 A 1 421 509 Y01 Y01 . 
Y 3 LMT A 1 422 510 LMT LMT . 
Z 5 Y01 B 1 401 509 Y01 Y01 . 
AA 3 LMT B 1 402 510 LMT LMT . 
BA 2 PTY B 1 403 502 PTY PTY . 
CA 3 LMT B 1 404 503 LMT LMT . 
DA 3 LMT B 1 405 504 LMT LMT . 
EA 3 LMT B 1 406 505 LMT LMT . 
FA 3 LMT B 1 407 506 LMT LMT . 
GA 3 LMT B 1 408 507 LMT LMT . 
HA 2 PTY B 1 409 508 PTY PTY . 
IA 3 LMT B 1 410 511 LMT LMT . 
JA 3 LMT B 1 411 512 LMT LMT . 
KA 3 LMT B 1 412 513 LMT LMT . 
LA 3 LMT B 1 413 514 LMT LMT . 
MA 3 LMT B 1 414 515 LMT LMT . 
NA 3 LMT B 1 415 516 LMT LMT . 
OA 3 LMT B 1 416 517 LMT LMT . 
PA 3 LMT B 1 417 518 LMT LMT . 
QA 3 LMT B 1 418 519 LMT LMT . 
RA 3 LMT B 1 419 520 LMT LMT . 
SA 3 LMT B 1 420 521 LMT LMT . 
TA 4 5D3 B 1 421 701 5D3 B14 . 
UA 4 5D3 B 1 422 702 5D3 B14 . 
VA 5 Y01 C 1 401 509 Y01 Y01 . 
WA 3 LMT C 1 402 510 LMT LMT . 
XA 2 PTY C 1 403 502 PTY PTY . 
YA 3 LMT C 1 404 503 LMT LMT . 
ZA 3 LMT C 1 405 504 LMT LMT . 
AB 3 LMT C 1 406 505 LMT LMT . 
BB 3 LMT C 1 407 506 LMT LMT . 
CB 3 LMT C 1 408 507 LMT LMT . 
DB 2 PTY C 1 409 508 PTY PTY . 
EB 3 LMT C 1 410 511 LMT LMT . 
FB 3 LMT C 1 411 512 LMT LMT . 
GB 3 LMT C 1 412 513 LMT LMT . 
HB 3 LMT C 1 413 514 LMT LMT . 
IB 3 LMT C 1 414 515 LMT LMT . 
JB 3 LMT C 1 415 516 LMT LMT . 
KB 3 LMT C 1 416 517 LMT LMT . 
LB 3 LMT C 1 417 518 LMT LMT . 
MB 3 LMT C 1 418 519 LMT LMT . 
NB 3 LMT C 1 419 520 LMT LMT . 
OB 3 LMT C 1 420 521 LMT LMT . 
PB 4 5D3 C 1 421 701 5D3 B14 . 
QB 4 5D3 C 1 422 702 5D3 B14 . 
RB 6 HOH A 1 501 619 HOH HOH . 
RB 6 HOH A 2 502 609 HOH HOH . 
RB 6 HOH A 3 503 617 HOH HOH . 
RB 6 HOH A 4 504 618 HOH HOH . 
RB 6 HOH A 5 505 611 HOH HOH . 
RB 6 HOH A 6 506 607 HOH HOH . 
RB 6 HOH A 7 507 610 HOH HOH . 
RB 6 HOH A 8 508 621 HOH HOH . 
RB 6 HOH A 9 509 614 HOH HOH . 
RB 6 HOH A 10 510 601 HOH HOH . 
RB 6 HOH A 11 511 612 HOH HOH . 
RB 6 HOH A 12 512 605 HOH HOH . 
RB 6 HOH A 13 513 603 HOH HOH . 
RB 6 HOH A 14 514 613 HOH HOH . 
RB 6 HOH A 15 515 604 HOH HOH . 
RB 6 HOH A 16 516 602 HOH HOH . 
RB 6 HOH A 17 517 616 HOH HOH . 
RB 6 HOH A 18 518 620 HOH HOH . 
RB 6 HOH A 19 519 615 HOH HOH . 
RB 6 HOH A 20 520 608 HOH HOH . 
RB 6 HOH A 21 521 622 HOH HOH . 
RB 6 HOH A 22 522 606 HOH HOH . 
SB 6 HOH B 1 501 619 HOH HOH . 
SB 6 HOH B 2 502 609 HOH HOH . 
SB 6 HOH B 3 503 617 HOH HOH . 
SB 6 HOH B 4 504 618 HOH HOH . 
SB 6 HOH B 5 505 611 HOH HOH . 
SB 6 HOH B 6 506 607 HOH HOH . 
SB 6 HOH B 7 507 610 HOH HOH . 
SB 6 HOH B 8 508 621 HOH HOH . 
SB 6 HOH B 9 509 614 HOH HOH . 
SB 6 HOH B 10 510 601 HOH HOH . 
SB 6 HOH B 11 511 612 HOH HOH . 
SB 6 HOH B 12 512 605 HOH HOH . 
SB 6 HOH B 13 513 603 HOH HOH . 
SB 6 HOH B 14 514 613 HOH HOH . 
SB 6 HOH B 15 515 604 HOH HOH . 
SB 6 HOH B 16 516 602 HOH HOH . 
SB 6 HOH B 17 517 616 HOH HOH . 
SB 6 HOH B 18 518 620 HOH HOH . 
SB 6 HOH B 19 519 615 HOH HOH . 
SB 6 HOH B 20 520 608 HOH HOH . 
SB 6 HOH B 21 521 622 HOH HOH . 
SB 6 HOH B 22 522 606 HOH HOH . 
TB 6 HOH C 1 501 619 HOH HOH . 
TB 6 HOH C 2 502 609 HOH HOH . 
TB 6 HOH C 3 503 617 HOH HOH . 
TB 6 HOH C 4 504 618 HOH HOH . 
TB 6 HOH C 5 505 611 HOH HOH . 
TB 6 HOH C 6 506 607 HOH HOH . 
TB 6 HOH C 7 507 614 HOH HOH . 
TB 6 HOH C 8 508 610 HOH HOH . 
TB 6 HOH C 9 509 621 HOH HOH . 
TB 6 HOH C 10 510 601 HOH HOH . 
TB 6 HOH C 11 511 612 HOH HOH . 
TB 6 HOH C 12 512 605 HOH HOH . 
TB 6 HOH C 13 513 603 HOH HOH . 
TB 6 HOH C 14 514 613 HOH HOH . 
TB 6 HOH C 15 515 604 HOH HOH . 
TB 6 HOH C 16 516 602 HOH HOH . 
TB 6 HOH C 17 517 616 HOH HOH . 
TB 6 HOH C 18 518 620 HOH HOH . 
TB 6 HOH C 19 519 615 HOH HOH . 
TB 6 HOH C 20 520 608 HOH HOH . 
TB 6 HOH C 21 521 622 HOH HOH . 
TB 6 HOH C 22 522 606 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C CAA Y01 . . . VA 5 101.578 132.839 123.6 1 44.63 ? CAA Y01 401 C 1 
HETATM 2 C CBA Y01 . . . VA 5 102.457 131.742 123.028 1 45.23 ? CBA Y01 401 C 1 
HETATM 3 C CAB Y01 . . . VA 5 102.678 130.64 124.052 1 46.5 ? CAB Y01 401 C 1 
HETATM 4 C CAN Y01 . . . VA 5 101.883 131.206 121.722 1 47.16 ? CAN Y01 401 C 1 
HETATM 5 C CAJ Y01 . . . VA 5 101.974 132.154 120.559 1 47.75 ? CAJ Y01 401 C 1 
HETATM 6 C CAO Y01 . . . VA 5 100.972 131.882 119.467 1 45.24 ? CAO Y01 401 C 1 
HETATM 7 C CBB Y01 . . . VA 5 101.057 132.847 118.276 1 47.13 ? CBB Y01 401 C 1 
HETATM 8 C CAC Y01 . . . VA 5 102.318 132.567 117.464 1 46.03 ? CAC Y01 401 C 1 
HETATM 9 C CBE Y01 . . . VA 5 99.758 132.819 117.448 1 47 ? CBE Y01 401 C 1 
HETATM 10 C CAP Y01 . . . VA 5 98.502 133.132 118.308 1 41.63 ? CAP Y01 401 C 1 
HETATM 11 C CAQ Y01 . . . VA 5 97.548 133.952 117.418 1 48.34 ? CAQ Y01 401 C 1 
HETATM 12 C CBG Y01 . . . VA 5 98.063 133.663 116.013 1 47.58 ? CBG Y01 401 C 1 
HETATM 13 C CBI Y01 . . . VA 5 99.592 133.716 116.181 1 42.35 ? CBI Y01 401 C 1 
HETATM 14 C CAE Y01 . . . VA 5 100.077 135.139 116.48 1 41.85 ? CAE Y01 401 C 1 
HETATM 15 C CAU Y01 . . . VA 5 100.195 133.192 114.873 1 43.24 ? CAU Y01 401 C 1 
HETATM 16 C CAS Y01 . . . VA 5 99.691 133.97 113.653 1 43.84 ? CAS Y01 401 C 1 
HETATM 17 C CBF Y01 . . . VA 5 98.159 133.975 113.539 1 40.36 ? CBF Y01 401 C 1 
HETATM 18 C CBD Y01 . . . VA 5 97.518 134.476 114.847 1 45.93 ? CBD Y01 401 C 1 
HETATM 19 C CAK Y01 . . . VA 5 96 134.352 114.78 1 50.15 ? CAK Y01 401 C 1 
HETATM 20 C CAI Y01 . . . VA 5 95.443 134.791 113.465 1 51.8 ? CAI Y01 401 C 1 
HETATM 21 C CAZ Y01 . . . VA 5 96.156 134.988 112.366 1 54.43 ? CAZ Y01 401 C 1 
HETATM 22 C CAV Y01 . . . VA 5 95.492 135.464 111.094 1 48.6 ? CAV Y01 401 C 1 
HETATM 23 C CBH Y01 . . . VA 5 97.655 134.719 112.269 1 44.66 ? CBH Y01 401 C 1 
HETATM 24 C CAD Y01 . . . VA 5 98.363 136.07 112.078 1 41.11 ? CAD Y01 401 C 1 
HETATM 25 C CAT Y01 . . . VA 5 97.899 133.833 111.025 1 41.42 ? CAT Y01 401 C 1 
HETATM 26 C CAR Y01 . . . VA 5 97.207 134.334 109.755 1 43.72 ? CAR Y01 401 C 1 
HETATM 27 C CBC Y01 . . . VA 5 95.727 134.486 109.973 1 44.2 ? CBC Y01 401 C 1 
HETATM 28 O OAW Y01 . . . VA 5 95.088 135.046 108.79 1 51.07 ? OAW Y01 401 C 1 
HETATM 29 C CAY Y01 . . . VA 5 94.432 134.225 107.982 1 53.8 ? CAY Y01 401 C 1 
HETATM 30 O OAG Y01 . . . VA 5 94.609 133.042 107.947 1 53.13 ? OAG Y01 401 C 1 
HETATM 31 C CAM Y01 . . . VA 5 93.389 134.952 107.176 1 47.96 ? CAM Y01 401 C 1 
HETATM 32 C CAL Y01 . . . VA 5 93.446 134.806 105.671 1 47.37 ? CAL Y01 401 C 1 
HETATM 33 C CAX Y01 . . . VA 5 94.678 135.403 105.02 1 50.29 ? CAX Y01 401 C 1 
HETATM 34 O OAH Y01 . . . VA 5 94.86 135.196 103.806 1 52.86 ? OAH Y01 401 C 1 
HETATM 35 O OAF Y01 . . . VA 5 95.444 136.082 105.723 1 49.86 ? OAF Y01 401 C 1 
#
_model_server_stats.io_time_ms              17 
_model_server_stats.parse_time_ms           42 
_model_server_stats.create_model_time_ms    14 
_model_server_stats.query_time_ms           272 
_model_server_stats.encode_time_ms          3 
_model_server_stats.element_count           35 
#