data_8BLP
#
_model_server_result.job_id            R476mkW3mePwSVb6z0oBLQ 
_model_server_result.datetime_utc      '2024-10-20 03:44:21' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          8blp 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"UA","auth_seq_id":422}' 
#
_entry.id    8BLP 
#
_exptl.entry_id    8BLP 
_exptl.method      'ELECTRON MICROSCOPY' 
#
_entity.details                     ? 
_entity.formula_weight              455.576 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            10-(4-ethylphenyl)sulfonyl-~{N}-(thiophen-2-ylmethyl)-5-thia-1,8,11,12-tetrazatricyclo[7.3.0.0^{2,6}]dodeca-2(6),3,7,9,11-pentaen-7-amine 
_entity.pdbx_number_of_molecules    6 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            8BLP 
_cell.length_a            1 
_cell.length_b            1 
_cell.length_c            1 
_cell.Z_PDB               ? 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 8BLP 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        1 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    trimeric 
_pdbx_struct_assembly.oligomeric_count      3 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA,CA,DA,EA,FA,GA,HA,IA,JA,KA,LA,MA,NA,OA,PA,QA,RA,SA,TA,UA,VA,WA,XA,YA,ZA,AB,BB,CB,DB,EB,FB,GB,HB,IB,JB,KB,LB,MB,NB,OB,PB,QB,RB,SB,TB 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    ? 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 4 V N N 
? 4 W N N 
? 4 TA N N 
? 4 UA N N 
? 4 PB N N 
? 4 QB N N 
#
_chem_comp.formula           'C20 H17 N5 O2 S3' 
_chem_comp.formula_weight    455.576 
_chem_comp.id                5D3 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              10-(4-ethylphenyl)sulfonyl-~{N}-(thiophen-2-ylmethyl)-5-thia-1,8,11,12-tetrazatricyclo[7.3.0.0^{2,6}]dodeca-2(6),3,7,9,11-pentaen-7-amine 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
CAA CAB 5D3 doub 1 n y 
CAA CAF 5D3 sing 2 n y 
CAA SAI 5D3 sing 3 n n 
CAB CAC 5D3 sing 4 n y 
CAC CAD 5D3 doub 5 n y 
CAD CAE 5D3 sing 6 n y 
CAD CAG 5D3 sing 7 n n 
CAE CAF 5D3 doub 8 n y 
CAG CAH 5D3 sing 9 n n 
CAK CAM 5D3 doub 10 n y 
CAK NAP 5D3 sing 11 n y 
CAK SAI 5D3 sing 12 n n 
CAM NAN 5D3 sing 13 n y 
CAM NAQ 5D3 sing 14 n y 
CAR CAS 5D3 sing 15 n y 
CAR NAQ 5D3 doub 16 n y 
CAR NAX 5D3 sing 17 n n 
CAS CAT 5D3 doub 18 n y 
CAS SAU 5D3 sing 19 n y 
CAT CAW 5D3 sing 20 n y 
CAT NAN 5D3 sing 21 n y 
CAV CAW 5D3 doub 22 n y 
CAV SAU 5D3 sing 23 n y 
CAY CAZ 5D3 sing 24 n n 
CAY NAX 5D3 sing 25 n n 
CAZ CBA 5D3 doub 26 n y 
CAZ SBD 5D3 sing 27 n y 
CBA CBB 5D3 sing 28 n y 
CBB CBC 5D3 doub 29 n y 
CBC SBD 5D3 sing 30 n y 
NAN NAO 5D3 sing 31 n y 
NAO NAP 5D3 doub 32 n y 
OAJ SAI 5D3 doub 33 n n 
OAL SAI 5D3 doub 34 n n 
CAB H1 5D3 sing 35 n n 
CAC H2 5D3 sing 36 n n 
CAE H3 5D3 sing 37 n n 
CAF H4 5D3 sing 38 n n 
CAV H11 5D3 sing 39 n n 
CAW H13 5D3 sing 40 n n 
CAY H14 5D3 sing 41 n n 
CAY H15 5D3 sing 42 n n 
CBA H17 5D3 sing 43 n n 
CBB H18 5D3 sing 44 n n 
CBC H20 5D3 sing 45 n n 
NAX H22 5D3 sing 46 n n 
CAG H5 5D3 sing 47 n n 
CAG H6 5D3 sing 48 n n 
CAH H7 5D3 sing 49 n n 
CAH H8 5D3 sing 50 n n 
CAH H9 5D3 sing 51 n n 
#
_atom_sites.entry_id                     8BLP 
_atom_sites.fract_transf_matrix[1][1]    1 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    1 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    1 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
D 2 PTY A 1 401 502 PTY PTY . 
E 3 LMT A 1 402 503 LMT LMT . 
F 3 LMT A 1 403 504 LMT LMT . 
G 3 LMT A 1 404 505 LMT LMT . 
H 3 LMT A 1 405 506 LMT LMT . 
I 3 LMT A 1 406 507 LMT LMT . 
J 2 PTY A 1 407 508 PTY PTY . 
K 3 LMT A 1 408 511 LMT LMT . 
L 3 LMT A 1 409 512 LMT LMT . 
M 3 LMT A 1 410 513 LMT LMT . 
N 3 LMT A 1 411 514 LMT LMT . 
O 3 LMT A 1 412 515 LMT LMT . 
P 3 LMT A 1 413 516 LMT LMT . 
Q 3 LMT A 1 414 517 LMT LMT . 
R 3 LMT A 1 415 518 LMT LMT . 
S 3 LMT A 1 416 519 LMT LMT . 
T 3 LMT A 1 417 520 LMT LMT . 
U 3 LMT A 1 418 521 LMT LMT . 
V 4 5D3 A 1 419 701 5D3 B14 . 
W 4 5D3 A 1 420 702 5D3 B14 . 
X 5 Y01 A 1 421 509 Y01 Y01 . 
Y 3 LMT A 1 422 510 LMT LMT . 
Z 5 Y01 B 1 401 509 Y01 Y01 . 
AA 3 LMT B 1 402 510 LMT LMT . 
BA 2 PTY B 1 403 502 PTY PTY . 
CA 3 LMT B 1 404 503 LMT LMT . 
DA 3 LMT B 1 405 504 LMT LMT . 
EA 3 LMT B 1 406 505 LMT LMT . 
FA 3 LMT B 1 407 506 LMT LMT . 
GA 3 LMT B 1 408 507 LMT LMT . 
HA 2 PTY B 1 409 508 PTY PTY . 
IA 3 LMT B 1 410 511 LMT LMT . 
JA 3 LMT B 1 411 512 LMT LMT . 
KA 3 LMT B 1 412 513 LMT LMT . 
LA 3 LMT B 1 413 514 LMT LMT . 
MA 3 LMT B 1 414 515 LMT LMT . 
NA 3 LMT B 1 415 516 LMT LMT . 
OA 3 LMT B 1 416 517 LMT LMT . 
PA 3 LMT B 1 417 518 LMT LMT . 
QA 3 LMT B 1 418 519 LMT LMT . 
RA 3 LMT B 1 419 520 LMT LMT . 
SA 3 LMT B 1 420 521 LMT LMT . 
TA 4 5D3 B 1 421 701 5D3 B14 . 
UA 4 5D3 B 1 422 702 5D3 B14 . 
VA 5 Y01 C 1 401 509 Y01 Y01 . 
WA 3 LMT C 1 402 510 LMT LMT . 
XA 2 PTY C 1 403 502 PTY PTY . 
YA 3 LMT C 1 404 503 LMT LMT . 
ZA 3 LMT C 1 405 504 LMT LMT . 
AB 3 LMT C 1 406 505 LMT LMT . 
BB 3 LMT C 1 407 506 LMT LMT . 
CB 3 LMT C 1 408 507 LMT LMT . 
DB 2 PTY C 1 409 508 PTY PTY . 
EB 3 LMT C 1 410 511 LMT LMT . 
FB 3 LMT C 1 411 512 LMT LMT . 
GB 3 LMT C 1 412 513 LMT LMT . 
HB 3 LMT C 1 413 514 LMT LMT . 
IB 3 LMT C 1 414 515 LMT LMT . 
JB 3 LMT C 1 415 516 LMT LMT . 
KB 3 LMT C 1 416 517 LMT LMT . 
LB 3 LMT C 1 417 518 LMT LMT . 
MB 3 LMT C 1 418 519 LMT LMT . 
NB 3 LMT C 1 419 520 LMT LMT . 
OB 3 LMT C 1 420 521 LMT LMT . 
PB 4 5D3 C 1 421 701 5D3 B14 . 
QB 4 5D3 C 1 422 702 5D3 B14 . 
RB 6 HOH A 1 501 619 HOH HOH . 
RB 6 HOH A 2 502 609 HOH HOH . 
RB 6 HOH A 3 503 617 HOH HOH . 
RB 6 HOH A 4 504 618 HOH HOH . 
RB 6 HOH A 5 505 611 HOH HOH . 
RB 6 HOH A 6 506 607 HOH HOH . 
RB 6 HOH A 7 507 610 HOH HOH . 
RB 6 HOH A 8 508 621 HOH HOH . 
RB 6 HOH A 9 509 614 HOH HOH . 
RB 6 HOH A 10 510 601 HOH HOH . 
RB 6 HOH A 11 511 612 HOH HOH . 
RB 6 HOH A 12 512 605 HOH HOH . 
RB 6 HOH A 13 513 603 HOH HOH . 
RB 6 HOH A 14 514 613 HOH HOH . 
RB 6 HOH A 15 515 604 HOH HOH . 
RB 6 HOH A 16 516 602 HOH HOH . 
RB 6 HOH A 17 517 616 HOH HOH . 
RB 6 HOH A 18 518 620 HOH HOH . 
RB 6 HOH A 19 519 615 HOH HOH . 
RB 6 HOH A 20 520 608 HOH HOH . 
RB 6 HOH A 21 521 622 HOH HOH . 
RB 6 HOH A 22 522 606 HOH HOH . 
SB 6 HOH B 1 501 619 HOH HOH . 
SB 6 HOH B 2 502 609 HOH HOH . 
SB 6 HOH B 3 503 617 HOH HOH . 
SB 6 HOH B 4 504 618 HOH HOH . 
SB 6 HOH B 5 505 611 HOH HOH . 
SB 6 HOH B 6 506 607 HOH HOH . 
SB 6 HOH B 7 507 610 HOH HOH . 
SB 6 HOH B 8 508 621 HOH HOH . 
SB 6 HOH B 9 509 614 HOH HOH . 
SB 6 HOH B 10 510 601 HOH HOH . 
SB 6 HOH B 11 511 612 HOH HOH . 
SB 6 HOH B 12 512 605 HOH HOH . 
SB 6 HOH B 13 513 603 HOH HOH . 
SB 6 HOH B 14 514 613 HOH HOH . 
SB 6 HOH B 15 515 604 HOH HOH . 
SB 6 HOH B 16 516 602 HOH HOH . 
SB 6 HOH B 17 517 616 HOH HOH . 
SB 6 HOH B 18 518 620 HOH HOH . 
SB 6 HOH B 19 519 615 HOH HOH . 
SB 6 HOH B 20 520 608 HOH HOH . 
SB 6 HOH B 21 521 622 HOH HOH . 
SB 6 HOH B 22 522 606 HOH HOH . 
TB 6 HOH C 1 501 619 HOH HOH . 
TB 6 HOH C 2 502 609 HOH HOH . 
TB 6 HOH C 3 503 617 HOH HOH . 
TB 6 HOH C 4 504 618 HOH HOH . 
TB 6 HOH C 5 505 611 HOH HOH . 
TB 6 HOH C 6 506 607 HOH HOH . 
TB 6 HOH C 7 507 614 HOH HOH . 
TB 6 HOH C 8 508 610 HOH HOH . 
TB 6 HOH C 9 509 621 HOH HOH . 
TB 6 HOH C 10 510 601 HOH HOH . 
TB 6 HOH C 11 511 612 HOH HOH . 
TB 6 HOH C 12 512 605 HOH HOH . 
TB 6 HOH C 13 513 603 HOH HOH . 
TB 6 HOH C 14 514 613 HOH HOH . 
TB 6 HOH C 15 515 604 HOH HOH . 
TB 6 HOH C 16 516 602 HOH HOH . 
TB 6 HOH C 17 517 616 HOH HOH . 
TB 6 HOH C 18 518 620 HOH HOH . 
TB 6 HOH C 19 519 615 HOH HOH . 
TB 6 HOH C 20 520 608 HOH HOH . 
TB 6 HOH C 21 521 622 HOH HOH . 
TB 6 HOH C 22 522 606 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C CAA 5D3 . . . UA 4 107.558 115.072 110.682 0.4 50.42 ? CAA 5D3 422 B 1 
HETATM 2 C CAB 5D3 . . . UA 4 107.511 115.897 109.571 0.4 48.84 ? CAB 5D3 422 B 1 
HETATM 3 C CAC 5D3 . . . UA 4 106.611 116.944 109.553 0.4 50.18 ? CAC 5D3 422 B 1 
HETATM 4 C CAD 5D3 . . . UA 4 105.76 117.183 110.619 0.4 51.95 ? CAD 5D3 422 B 1 
HETATM 5 C CAE 5D3 . . . UA 4 105.836 116.346 111.722 0.4 49.31 ? CAE 5D3 422 B 1 
HETATM 6 C CAF 5D3 . . . UA 4 106.726 115.29 111.766 0.4 48.36 ? CAF 5D3 422 B 1 
HETATM 7 C CAG 5D3 . . . UA 4 104.787 118.343 110.583 0.4 50.6 ? CAG 5D3 422 B 1 
HETATM 8 C CAH 5D3 . . . UA 4 105.498 119.669 110.631 0.4 50.12 ? CAH 5D3 422 B 1 
HETATM 9 C CAK 5D3 . . . UA 4 107.919 112.411 109.921 0.4 56.65 ? CAK 5D3 422 B 1 
HETATM 10 C CAM 5D3 . . . UA 4 107.196 111.422 110.474 0.4 53.79 ? CAM 5D3 422 B 1 
HETATM 11 C CAR 5D3 . . . UA 4 106.123 110.097 112.006 0.4 55.24 ? CAR 5D3 422 B 1 
HETATM 12 C CAS 5D3 . . . UA 4 105.702 109.265 110.942 0.4 50.45 ? CAS 5D3 422 B 1 
HETATM 13 C CAT 5D3 . . . UA 4 106.041 109.529 109.638 0.4 47.63 ? CAT 5D3 422 B 1 
HETATM 14 C CAV 5D3 . . . UA 4 104.727 107.672 109.377 0.4 55.44 ? CAV 5D3 422 B 1 
HETATM 15 C CAW 5D3 . . . UA 4 105.515 108.57 108.734 0.4 51.78 ? CAW 5D3 422 B 1 
HETATM 16 C CAY 5D3 . . . UA 4 105.697 110.816 114.287 0.4 47.34 ? CAY 5D3 422 B 1 
HETATM 17 C CAZ 5D3 . . . UA 4 106.75 110.567 115.317 0.4 54.32 ? CAZ 5D3 422 B 1 
HETATM 18 C CBA 5D3 . . . UA 4 108.118 110.821 115.203 0.4 50.98 ? CBA 5D3 422 B 1 
HETATM 19 C CBB 5D3 . . . UA 4 108.794 110.482 116.406 0.4 51.76 ? CBB 5D3 422 B 1 
HETATM 20 C CBC 5D3 . . . UA 4 107.987 109.952 117.346 0.4 51.55 ? CBC 5D3 422 B 1 
HETATM 21 N NAN 5D3 . . . UA 4 106.813 110.649 109.43 0.4 52.29 ? NAN 5D3 422 B 1 
HETATM 22 N NAO 5D3 . . . UA 4 107.29 111.145 108.257 0.4 58.18 ? NAO 5D3 422 B 1 
HETATM 23 N NAP 5D3 . . . UA 4 107.972 112.23 108.573 0.4 54.76 ? NAP 5D3 422 B 1 
HETATM 24 N NAQ 5D3 . . . UA 4 106.893 111.211 111.773 0.4 51.72 ? NAQ 5D3 422 B 1 
HETATM 25 N NAX 5D3 . . . UA 4 105.777 109.815 113.254 0.4 56.58 ? NAX 5D3 422 B 1 
HETATM 26 O OAJ 5D3 . . . UA 4 109.825 114.121 109.89 0.4 54.14 ? OAJ 5D3 422 B 1 
HETATM 27 O OAL 5D3 . . . UA 4 108.93 113.366 112.081 0.4 55.33 ? OAL 5D3 422 B 1 
HETATM 28 S SAI 5D3 . . . UA 4 108.712 113.741 110.712 0.4 76.74 ? SAI 5D3 422 B 1 
HETATM 29 S SAU 5D3 . . . UA 4 104.742 107.849 111.075 0.4 55.29 ? SAU 5D3 422 B 1 
HETATM 30 S SBD 5D3 . . . UA 4 106.366 109.897 116.843 0.4 68.39 ? SBD 5D3 422 B 1 
#
_model_server_stats.io_time_ms              8 
_model_server_stats.parse_time_ms           10 
_model_server_stats.create_model_time_ms    16 
_model_server_stats.query_time_ms           313 
_model_server_stats.encode_time_ms          3 
_model_server_stats.element_count           30 
#