data_8BN6 # _model_server_result.job_id HfNkp0pRULA5Hu8PgNtH6g _model_server_result.datetime_utc '2025-07-17 19:40:46' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8bn6 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":301}' # _entry.id 8BN6 # _exptl.entry_id 8BN6 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 40.078 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CALCIUM ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 8BN6 _cell.length_a 45.2 _cell.length_b 115.65 _cell.length_c 38.63 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8BN6 _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 B N N ? 2 C N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A O ASN 76 A ASN 76 1_555 B CA CA . A CA 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.378 ? metalc ? metalc2 A O GLY 77 A GLY 77 1_555 B CA CA . A CA 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.626 ? metalc ? metalc3 A O SER 165 A SER 165 1_555 B CA CA . A CA 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.732 ? metalc ? metalc4 A OG SER 165 A SER 165 1_555 B CA CA . A CA 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.338 ? metalc ? metalc5 B CA CA . A CA 301 1_555 E O HOH . A HOH 490 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.355 ? metalc ? metalc6 B CA CA . A CA 301 1_555 E O HOH . A HOH 499 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.728 ? metalc ? metalc7 B CA CA . A CA 301 1_555 E O HOH . A HOH 521 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.384 ? metalc ? metalc8 B CA CA . A CA 301 1_555 E O HOH . A HOH 534 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.284 ? metalc ? metalc9 C CA CA . A CA 302 1_555 E O HOH . A HOH 411 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.485 ? metalc ? metalc10 C CA CA . A CA 302 1_555 E O HOH . A HOH 417 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.389 ? metalc ? metalc11 C CA CA . A CA 302 1_555 E O HOH . A HOH 511 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.692 ? metalc ? metalc12 C CA CA . A CA 302 1_555 E O HOH . A HOH 587 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.63 ? metalc ? metalc13 C CA CA . A CA 302 1_555 E O HOH . A HOH 588 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.751 ? metalc ? metalc14 C CA CA . A CA 302 1_555 E O HOH . A HOH 593 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.461 ? metalc ? metalc15 C CA CA . A CA 302 1_555 E O HOH . A HOH 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.448 ? # _chem_comp.formula 'Ca 2' _chem_comp.formula_weight 40.078 _chem_comp.id CA _chem_comp.mon_nstd_flag . _chem_comp.name 'CALCIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 8BN6 _atom_sites.fract_transf_matrix[1][1] 0.022124 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.008647 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.025887 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 CA A 1 301 251 CA CA . C 2 CA A 1 302 252 CA CA . D 3 R53 A 1 303 301 R53 DRG . E 4 HOH A 1 401 215 HOH HOH . E 4 HOH A 2 402 62 HOH HOH . E 4 HOH A 3 403 210 HOH HOH . E 4 HOH A 4 404 128 HOH HOH . E 4 HOH A 5 405 190 HOH HOH . E 4 HOH A 6 406 209 HOH HOH . E 4 HOH A 7 407 172 HOH HOH . E 4 HOH A 8 408 19 HOH HOH . E 4 HOH A 9 409 214 HOH HOH . E 4 HOH A 10 410 57 HOH HOH . E 4 HOH A 11 411 168 HOH HOH . E 4 HOH A 12 412 140 HOH HOH . E 4 HOH A 13 413 123 HOH HOH . E 4 HOH A 14 414 155 HOH HOH . E 4 HOH A 15 415 217 HOH HOH . E 4 HOH A 16 416 147 HOH HOH . E 4 HOH A 17 417 126 HOH HOH . E 4 HOH A 18 418 204 HOH HOH . E 4 HOH A 19 419 87 HOH HOH . E 4 HOH A 20 420 69 HOH HOH . E 4 HOH A 21 421 202 HOH HOH . E 4 HOH A 22 422 77 HOH HOH . E 4 HOH A 23 423 96 HOH HOH . E 4 HOH A 24 424 61 HOH HOH . E 4 HOH A 25 425 29 HOH HOH . E 4 HOH A 26 426 80 HOH HOH . E 4 HOH A 27 427 158 HOH HOH . E 4 HOH A 28 428 6 HOH HOH . E 4 HOH A 29 429 169 HOH HOH . E 4 HOH A 30 430 28 HOH HOH . E 4 HOH A 31 431 160 HOH HOH . E 4 HOH A 32 432 71 HOH HOH . E 4 HOH A 33 433 195 HOH HOH . E 4 HOH A 34 434 134 HOH HOH . E 4 HOH A 35 435 197 HOH HOH . E 4 HOH A 36 436 17 HOH HOH . E 4 HOH A 37 437 66 HOH HOH . E 4 HOH A 38 438 1 HOH HOH . E 4 HOH A 39 439 91 HOH HOH . E 4 HOH A 40 440 143 HOH HOH . E 4 HOH A 41 441 74 HOH HOH . E 4 HOH A 42 442 39 HOH HOH . E 4 HOH A 43 443 83 HOH HOH . E 4 HOH A 44 444 203 HOH HOH . E 4 HOH A 45 445 18 HOH HOH . E 4 HOH A 46 446 176 HOH HOH . E 4 HOH A 47 447 27 HOH HOH . E 4 HOH A 48 448 191 HOH HOH . E 4 HOH A 49 449 45 HOH HOH . E 4 HOH A 50 450 44 HOH HOH . E 4 HOH A 51 451 179 HOH HOH . E 4 HOH A 52 452 103 HOH HOH . E 4 HOH A 53 453 163 HOH HOH . E 4 HOH A 54 454 175 HOH HOH . E 4 HOH A 55 455 129 HOH HOH . E 4 HOH A 56 456 14 HOH HOH . E 4 HOH A 57 457 10 HOH HOH . E 4 HOH A 58 458 170 HOH HOH . E 4 HOH A 59 459 72 HOH HOH . E 4 HOH A 60 460 106 HOH HOH . E 4 HOH A 61 461 166 HOH HOH . E 4 HOH A 62 462 11 HOH HOH . E 4 HOH A 63 463 164 HOH HOH . E 4 HOH A 64 464 30 HOH HOH . E 4 HOH A 65 465 50 HOH HOH . E 4 HOH A 66 466 22 HOH HOH . E 4 HOH A 67 467 59 HOH HOH . E 4 HOH A 68 468 32 HOH HOH . E 4 HOH A 69 469 152 HOH HOH . E 4 HOH A 70 470 145 HOH HOH . E 4 HOH A 71 471 47 HOH HOH . E 4 HOH A 72 472 55 HOH HOH . E 4 HOH A 73 473 54 HOH HOH . E 4 HOH A 74 474 121 HOH HOH . E 4 HOH A 75 475 122 HOH HOH . E 4 HOH A 76 476 142 HOH HOH . E 4 HOH A 77 477 3 HOH HOH . E 4 HOH A 78 478 49 HOH HOH . E 4 HOH A 79 479 31 HOH HOH . E 4 HOH A 80 480 84 HOH HOH . E 4 HOH A 81 481 93 HOH HOH . E 4 HOH A 82 482 177 HOH HOH . E 4 HOH A 83 483 130 HOH HOH . E 4 HOH A 84 484 104 HOH HOH . E 4 HOH A 85 485 198 HOH HOH . E 4 HOH A 86 486 194 HOH HOH . E 4 HOH A 87 487 144 HOH HOH . E 4 HOH A 88 488 34 HOH HOH . E 4 HOH A 89 489 53 HOH HOH . E 4 HOH A 90 490 118 HOH HOH . E 4 HOH A 91 491 193 HOH HOH . E 4 HOH A 92 492 78 HOH HOH . E 4 HOH A 93 493 65 HOH HOH . E 4 HOH A 94 494 36 HOH HOH . E 4 HOH A 95 495 63 HOH HOH . E 4 HOH A 96 496 60 HOH HOH . E 4 HOH A 97 497 13 HOH HOH . E 4 HOH A 98 498 70 HOH HOH . E 4 HOH A 99 499 117 HOH HOH . E 4 HOH A 100 500 33 HOH HOH . E 4 HOH A 101 501 16 HOH HOH . E 4 HOH A 102 502 2 HOH HOH . E 4 HOH A 103 503 23 HOH HOH . E 4 HOH A 104 504 199 HOH HOH . E 4 HOH A 105 505 90 HOH HOH . E 4 HOH A 106 506 146 HOH HOH . E 4 HOH A 107 507 81 HOH HOH . E 4 HOH A 108 508 138 HOH HOH . E 4 HOH A 109 509 141 HOH HOH . E 4 HOH A 110 510 15 HOH HOH . E 4 HOH A 111 511 52 HOH HOH . E 4 HOH A 112 512 9 HOH HOH . E 4 HOH A 113 513 162 HOH HOH . E 4 HOH A 114 514 58 HOH HOH . E 4 HOH A 115 515 76 HOH HOH . E 4 HOH A 116 516 79 HOH HOH . E 4 HOH A 117 517 82 HOH HOH . E 4 HOH A 118 518 109 HOH HOH . E 4 HOH A 119 519 12 HOH HOH . E 4 HOH A 120 520 8 HOH HOH . E 4 HOH A 121 521 115 HOH HOH . E 4 HOH A 122 522 216 HOH HOH . E 4 HOH A 123 523 5 HOH HOH . E 4 HOH A 124 524 35 HOH HOH . E 4 HOH A 125 525 38 HOH HOH . E 4 HOH A 126 526 208 HOH HOH . E 4 HOH A 127 527 20 HOH HOH . E 4 HOH A 128 528 139 HOH HOH . E 4 HOH A 129 529 136 HOH HOH . E 4 HOH A 130 530 86 HOH HOH . E 4 HOH A 131 531 183 HOH HOH . E 4 HOH A 132 532 100 HOH HOH . E 4 HOH A 133 533 26 HOH HOH . E 4 HOH A 134 534 116 HOH HOH . E 4 HOH A 135 535 75 HOH HOH . E 4 HOH A 136 536 207 HOH HOH . E 4 HOH A 137 537 56 HOH HOH . E 4 HOH A 138 538 43 HOH HOH . E 4 HOH A 139 539 154 HOH HOH . E 4 HOH A 140 540 46 HOH HOH . E 4 HOH A 141 541 7 HOH HOH . E 4 HOH A 142 542 201 HOH HOH . E 4 HOH A 143 543 4 HOH HOH . E 4 HOH A 144 544 25 HOH HOH . E 4 HOH A 145 545 97 HOH HOH . E 4 HOH A 146 546 68 HOH HOH . E 4 HOH A 147 547 131 HOH HOH . E 4 HOH A 148 548 206 HOH HOH . E 4 HOH A 149 549 174 HOH HOH . E 4 HOH A 150 550 153 HOH HOH . E 4 HOH A 151 551 67 HOH HOH . E 4 HOH A 152 552 200 HOH HOH . E 4 HOH A 153 553 42 HOH HOH . E 4 HOH A 154 554 105 HOH HOH . E 4 HOH A 155 555 165 HOH HOH . E 4 HOH A 156 556 24 HOH HOH . E 4 HOH A 157 557 21 HOH HOH . E 4 HOH A 158 558 48 HOH HOH . E 4 HOH A 159 559 185 HOH HOH . E 4 HOH A 160 560 171 HOH HOH . E 4 HOH A 161 561 95 HOH HOH . E 4 HOH A 162 562 88 HOH HOH . E 4 HOH A 163 563 184 HOH HOH . E 4 HOH A 164 564 37 HOH HOH . E 4 HOH A 165 565 107 HOH HOH . E 4 HOH A 166 566 125 HOH HOH . E 4 HOH A 167 567 119 HOH HOH . E 4 HOH A 168 568 40 HOH HOH . E 4 HOH A 169 569 148 HOH HOH . E 4 HOH A 170 570 178 HOH HOH . E 4 HOH A 171 571 73 HOH HOH . E 4 HOH A 172 572 101 HOH HOH . E 4 HOH A 173 573 211 HOH HOH . E 4 HOH A 174 574 135 HOH HOH . E 4 HOH A 175 575 127 HOH HOH . E 4 HOH A 176 576 64 HOH HOH . E 4 HOH A 177 577 111 HOH HOH . E 4 HOH A 178 578 196 HOH HOH . E 4 HOH A 179 579 151 HOH HOH . E 4 HOH A 180 580 161 HOH HOH . E 4 HOH A 181 581 120 HOH HOH . E 4 HOH A 182 582 99 HOH HOH . E 4 HOH A 183 583 156 HOH HOH . E 4 HOH A 184 584 89 HOH HOH . E 4 HOH A 185 585 212 HOH HOH . E 4 HOH A 186 586 149 HOH HOH . E 4 HOH A 187 587 187 HOH HOH . E 4 HOH A 188 588 188 HOH HOH . E 4 HOH A 189 589 51 HOH HOH . E 4 HOH A 190 590 213 HOH HOH . E 4 HOH A 191 591 137 HOH HOH . E 4 HOH A 192 592 102 HOH HOH . E 4 HOH A 193 593 189 HOH HOH . E 4 HOH A 194 594 133 HOH HOH . E 4 HOH A 195 595 124 HOH HOH . E 4 HOH A 196 596 180 HOH HOH . E 4 HOH A 197 597 41 HOH HOH . E 4 HOH A 198 598 98 HOH HOH . E 4 HOH A 199 599 167 HOH HOH . E 4 HOH A 200 600 150 HOH HOH . E 4 HOH A 201 601 113 HOH HOH . E 4 HOH A 202 602 186 HOH HOH . E 4 HOH A 203 603 108 HOH HOH . E 4 HOH A 204 604 114 HOH HOH . E 4 HOH A 205 605 132 HOH HOH . E 4 HOH A 206 606 110 HOH HOH . E 4 HOH A 207 607 192 HOH HOH . E 4 HOH A 208 608 182 HOH HOH . E 4 HOH A 209 609 157 HOH HOH . E 4 HOH A 210 610 94 HOH HOH . E 4 HOH A 211 611 112 HOH HOH . E 4 HOH A 212 612 85 HOH HOH . E 4 HOH A 213 613 173 HOH HOH . E 4 HOH A 214 614 92 HOH HOH . E 4 HOH A 215 615 159 HOH HOH . E 4 HOH A 216 616 181 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol CA _atom_site.label_atom_id CA _atom_site.label_comp_id CA _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id B _atom_site.label_entity_id 2 _atom_site.Cartn_x -4.455 _atom_site.Cartn_y 26.301 _atom_site.Cartn_z 11.922 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 36.53 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id CA _atom_site.auth_comp_id CA _atom_site.auth_seq_id 301 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 13 _model_server_stats.parse_time_ms 21 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 333 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 1 #