data_8BO3 # _model_server_result.job_id JFbbZFPF0d3jqF4MXgjB_g _model_server_result.datetime_utc '2024-10-11 13:32:09' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8bo3 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":1002}' # _entry.id 8BO3 # _exptl.entry_id 8BO3 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 192.124 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CITRIC ACID' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 8BO3 _cell.length_a 58.194 _cell.length_b 59.916 _cell.length_c 66.816 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8BO3 _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 29 AAA CYS 416 1_555 A SG CYS 45 AAA CYS 432 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.019 ? disulf ? disulf2 A SG CYS 127 AAA CYS 514 1_555 A SG CYS 194 AAA CYS 581 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.065 ? disulf ? disulf3 A SG CYS 158 AAA CYS 545 1_555 A SG CYS 173 AAA CYS 560 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? disulf ? disulf4 A SG CYS 184 AAA CYS 571 1_555 A SG CYS 212 AAA CYS 599 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.096 ? # _chem_comp.formula 'C6 H8 O7' _chem_comp.formula_weight 192.124 _chem_comp.id CIT _chem_comp.mon_nstd_flag . _chem_comp.name 'CITRIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 CIT doub 70 n n C1 O2 CIT sing 71 n n C1 C2 CIT sing 72 n n O2 HO2 CIT sing 73 n n C2 C3 CIT sing 74 n n C2 H21 CIT sing 75 n n C2 H22 CIT sing 76 n n C3 O7 CIT sing 77 n n C3 C4 CIT sing 78 n n C3 C6 CIT sing 79 n n O7 HO7 CIT sing 80 n n C4 C5 CIT sing 81 n n C4 H41 CIT sing 82 n n C4 H42 CIT sing 83 n n C5 O3 CIT doub 84 n n C5 O4 CIT sing 85 n n O4 HO4 CIT sing 86 n n C6 O5 CIT doub 87 n n C6 O6 CIT sing 88 n n O6 HO6 CIT sing 89 n n # _atom_sites.entry_id 8BO3 _atom_sites.fract_transf_matrix[1][1] 0.017184 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.01669 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.014966 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 QV3 AAA 1 1001 1001 QV3 LIG . C 3 CIT AAA 1 1002 1 CIT CIT . D 4 HOH AAA 1 1101 87 HOH HOH . D 4 HOH AAA 2 1102 144 HOH HOH . D 4 HOH AAA 3 1103 58 HOH HOH . D 4 HOH AAA 4 1104 136 HOH HOH . D 4 HOH AAA 5 1105 132 HOH HOH . D 4 HOH AAA 6 1106 67 HOH HOH . D 4 HOH AAA 7 1107 120 HOH HOH . D 4 HOH AAA 8 1108 150 HOH HOH . D 4 HOH AAA 9 1109 51 HOH HOH . D 4 HOH AAA 10 1110 128 HOH HOH . D 4 HOH AAA 11 1111 30 HOH HOH . D 4 HOH AAA 12 1112 126 HOH HOH . D 4 HOH AAA 13 1113 100 HOH HOH . D 4 HOH AAA 14 1114 53 HOH HOH . D 4 HOH AAA 15 1115 4 HOH HOH . D 4 HOH AAA 16 1116 166 HOH HOH . D 4 HOH AAA 17 1117 32 HOH HOH . D 4 HOH AAA 18 1118 108 HOH HOH . D 4 HOH AAA 19 1119 16 HOH HOH . D 4 HOH AAA 20 1120 99 HOH HOH . D 4 HOH AAA 21 1121 89 HOH HOH . D 4 HOH AAA 22 1122 155 HOH HOH . D 4 HOH AAA 23 1123 59 HOH HOH . D 4 HOH AAA 24 1124 139 HOH HOH . D 4 HOH AAA 25 1125 15 HOH HOH . D 4 HOH AAA 26 1126 80 HOH HOH . D 4 HOH AAA 27 1127 154 HOH HOH . D 4 HOH AAA 28 1128 17 HOH HOH . D 4 HOH AAA 29 1129 29 HOH HOH . D 4 HOH AAA 30 1130 93 HOH HOH . D 4 HOH AAA 31 1131 27 HOH HOH . D 4 HOH AAA 32 1132 3 HOH HOH . D 4 HOH AAA 33 1133 114 HOH HOH . D 4 HOH AAA 34 1134 118 HOH HOH . D 4 HOH AAA 35 1135 55 HOH HOH . D 4 HOH AAA 36 1136 57 HOH HOH . D 4 HOH AAA 37 1137 11 HOH HOH . D 4 HOH AAA 38 1138 134 HOH HOH . D 4 HOH AAA 39 1139 19 HOH HOH . D 4 HOH AAA 40 1140 10 HOH HOH . D 4 HOH AAA 41 1141 74 HOH HOH . D 4 HOH AAA 42 1142 61 HOH HOH . D 4 HOH AAA 43 1143 103 HOH HOH . D 4 HOH AAA 44 1144 97 HOH HOH . D 4 HOH AAA 45 1145 129 HOH HOH . D 4 HOH AAA 46 1146 92 HOH HOH . D 4 HOH AAA 47 1147 28 HOH HOH . D 4 HOH AAA 48 1148 76 HOH HOH . D 4 HOH AAA 49 1149 124 HOH HOH . D 4 HOH AAA 50 1150 14 HOH HOH . D 4 HOH AAA 51 1151 79 HOH HOH . D 4 HOH AAA 52 1152 12 HOH HOH . D 4 HOH AAA 53 1153 104 HOH HOH . D 4 HOH AAA 54 1154 24 HOH HOH . D 4 HOH AAA 55 1155 135 HOH HOH . D 4 HOH AAA 56 1156 47 HOH HOH . D 4 HOH AAA 57 1157 156 HOH HOH . D 4 HOH AAA 58 1158 18 HOH HOH . D 4 HOH AAA 59 1159 39 HOH HOH . D 4 HOH AAA 60 1160 35 HOH HOH . D 4 HOH AAA 61 1161 8 HOH HOH . D 4 HOH AAA 62 1162 98 HOH HOH . D 4 HOH AAA 63 1163 26 HOH HOH . D 4 HOH AAA 64 1164 119 HOH HOH . D 4 HOH AAA 65 1165 23 HOH HOH . D 4 HOH AAA 66 1166 162 HOH HOH . D 4 HOH AAA 67 1167 152 HOH HOH . D 4 HOH AAA 68 1168 21 HOH HOH . D 4 HOH AAA 69 1169 116 HOH HOH . D 4 HOH AAA 70 1170 73 HOH HOH . D 4 HOH AAA 71 1171 20 HOH HOH . D 4 HOH AAA 72 1172 115 HOH HOH . D 4 HOH AAA 73 1173 149 HOH HOH . D 4 HOH AAA 74 1174 64 HOH HOH . D 4 HOH AAA 75 1175 153 HOH HOH . D 4 HOH AAA 76 1176 66 HOH HOH . D 4 HOH AAA 77 1177 133 HOH HOH . D 4 HOH AAA 78 1178 131 HOH HOH . D 4 HOH AAA 79 1179 9 HOH HOH . D 4 HOH AAA 80 1180 5 HOH HOH . D 4 HOH AAA 81 1181 102 HOH HOH . D 4 HOH AAA 82 1182 117 HOH HOH . D 4 HOH AAA 83 1183 54 HOH HOH . D 4 HOH AAA 84 1184 50 HOH HOH . D 4 HOH AAA 85 1185 49 HOH HOH . D 4 HOH AAA 86 1186 13 HOH HOH . D 4 HOH AAA 87 1187 151 HOH HOH . D 4 HOH AAA 88 1188 140 HOH HOH . D 4 HOH AAA 89 1189 81 HOH HOH . D 4 HOH AAA 90 1190 6 HOH HOH . D 4 HOH AAA 91 1191 25 HOH HOH . D 4 HOH AAA 92 1192 101 HOH HOH . D 4 HOH AAA 93 1193 62 HOH HOH . D 4 HOH AAA 94 1194 41 HOH HOH . D 4 HOH AAA 95 1195 70 HOH HOH . D 4 HOH AAA 96 1196 37 HOH HOH . D 4 HOH AAA 97 1197 72 HOH HOH . D 4 HOH AAA 98 1198 157 HOH HOH . D 4 HOH AAA 99 1199 121 HOH HOH . D 4 HOH AAA 100 1200 94 HOH HOH . D 4 HOH AAA 101 1201 60 HOH HOH . D 4 HOH AAA 102 1202 45 HOH HOH . D 4 HOH AAA 103 1203 85 HOH HOH . D 4 HOH AAA 104 1204 34 HOH HOH . D 4 HOH AAA 105 1205 46 HOH HOH . D 4 HOH AAA 106 1206 143 HOH HOH . D 4 HOH AAA 107 1207 106 HOH HOH . D 4 HOH AAA 108 1208 56 HOH HOH . D 4 HOH AAA 109 1209 38 HOH HOH . D 4 HOH AAA 110 1210 111 HOH HOH . D 4 HOH AAA 111 1211 161 HOH HOH . D 4 HOH AAA 112 1212 137 HOH HOH . D 4 HOH AAA 113 1213 125 HOH HOH . D 4 HOH AAA 114 1214 43 HOH HOH . D 4 HOH AAA 115 1215 96 HOH HOH . D 4 HOH AAA 116 1216 130 HOH HOH . D 4 HOH AAA 117 1217 42 HOH HOH . D 4 HOH AAA 118 1218 22 HOH HOH . D 4 HOH AAA 119 1219 77 HOH HOH . D 4 HOH AAA 120 1220 163 HOH HOH . D 4 HOH AAA 121 1221 7 HOH HOH . D 4 HOH AAA 122 1222 33 HOH HOH . D 4 HOH AAA 123 1223 63 HOH HOH . D 4 HOH AAA 124 1224 52 HOH HOH . D 4 HOH AAA 125 1225 31 HOH HOH . D 4 HOH AAA 126 1226 83 HOH HOH . D 4 HOH AAA 127 1227 1 HOH HOH . D 4 HOH AAA 128 1228 71 HOH HOH . D 4 HOH AAA 129 1229 127 HOH HOH . D 4 HOH AAA 130 1230 122 HOH HOH . D 4 HOH AAA 131 1231 84 HOH HOH . D 4 HOH AAA 132 1232 105 HOH HOH . D 4 HOH AAA 133 1233 82 HOH HOH . D 4 HOH AAA 134 1234 36 HOH HOH . D 4 HOH AAA 135 1235 48 HOH HOH . D 4 HOH AAA 136 1236 91 HOH HOH . D 4 HOH AAA 137 1237 95 HOH HOH . D 4 HOH AAA 138 1238 110 HOH HOH . D 4 HOH AAA 139 1239 90 HOH HOH . D 4 HOH AAA 140 1240 88 HOH HOH . D 4 HOH AAA 141 1241 146 HOH HOH . D 4 HOH AAA 142 1242 107 HOH HOH . D 4 HOH AAA 143 1243 145 HOH HOH . D 4 HOH AAA 144 1244 2 HOH HOH . D 4 HOH AAA 145 1245 65 HOH HOH . D 4 HOH AAA 146 1246 148 HOH HOH . D 4 HOH AAA 147 1247 160 HOH HOH . D 4 HOH AAA 148 1248 44 HOH HOH . D 4 HOH AAA 149 1249 165 HOH HOH . D 4 HOH AAA 150 1250 78 HOH HOH . D 4 HOH AAA 151 1251 138 HOH HOH . D 4 HOH AAA 152 1252 86 HOH HOH . D 4 HOH AAA 153 1253 158 HOH HOH . D 4 HOH AAA 154 1254 109 HOH HOH . D 4 HOH AAA 155 1255 159 HOH HOH . D 4 HOH AAA 156 1256 147 HOH HOH . D 4 HOH AAA 157 1257 75 HOH HOH . D 4 HOH AAA 158 1258 68 HOH HOH . D 4 HOH AAA 159 1259 113 HOH HOH . D 4 HOH AAA 160 1260 142 HOH HOH . D 4 HOH AAA 161 1261 69 HOH HOH . D 4 HOH AAA 162 1262 123 HOH HOH . D 4 HOH AAA 163 1263 40 HOH HOH . D 4 HOH AAA 164 1264 112 HOH HOH . D 4 HOH AAA 165 1265 164 HOH HOH . D 4 HOH AAA 166 1266 141 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 CIT . . . C 3 -14.917 3.431 7.25 1 49.2 0 C1 CIT 1002 AAA 1 HETATM 2 O O1 CIT . . . C 3 -14.76 3.691 6.026 1 54.28 0 O1 CIT 1002 AAA 1 HETATM 3 O O2 CIT . . . C 3 -15.183 4.27 8.12 1 42.01 0 O2 CIT 1002 AAA 1 HETATM 4 C C2 CIT . . . C 3 -14.782 1.994 7.7 1 50.6 0 C2 CIT 1002 AAA 1 HETATM 5 C C3 CIT . . . C 3 -14.201 1.034 6.659 1 54.5 0 C3 CIT 1002 AAA 1 HETATM 6 O O7 CIT . . . C 3 -15.144 0.864 5.616 1 54.85 0 O7 CIT 1002 AAA 1 HETATM 7 C C4 CIT . . . C 3 -13.965 -0.323 7.329 1 53.23 0 C4 CIT 1002 AAA 1 HETATM 8 C C5 CIT . . . C 3 -13.709 -1.457 6.356 1 56.87 0 C5 CIT 1002 AAA 1 HETATM 9 O O3 CIT . . . C 3 -14.709 -1.933 5.739 1 53.57 0 O3 CIT 1002 AAA 1 HETATM 10 O O4 CIT . . . C 3 -12.516 -1.84 6.209 1 48.7 0 O4 CIT 1002 AAA 1 HETATM 11 C C6 CIT . . . C 3 -12.857 1.574 6.084 1 59.3 0 C6 CIT 1002 AAA 1 HETATM 12 O O5 CIT . . . C 3 -12.678 1.429 4.853 1 65.69 0 O5 CIT 1002 AAA 1 HETATM 13 O O6 CIT . . . C 3 -12.036 2.111 6.877 1 55.49 0 O6 CIT 1002 AAA 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 13 _model_server_stats.create_model_time_ms 14 _model_server_stats.query_time_ms 317 _model_server_stats.encode_time_ms 7 _model_server_stats.element_count 13 #