data_8BO6 # _model_server_result.job_id OnEI3Qf1IjZV7ulYsxMxjA _model_server_result.datetime_utc '2024-10-11 11:19:26' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8bo6 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":703}' # _entry.id 8BO6 # _exptl.entry_id 8BO6 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 92.094 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description GLYCEROL _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 8BO6 _cell.length_a 59.12 _cell.length_b 59.634 _cell.length_c 67.053 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8BO6 _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 D N N ? 4 E N N ? 4 F N N ? 4 G N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 29 AAA CYS 416 1_555 A SG CYS 45 AAA CYS 432 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.039 ? disulf ? disulf2 A SG CYS 127 AAA CYS 514 1_555 A SG CYS 194 AAA CYS 581 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.062 ? disulf ? disulf3 A SG CYS 158 AAA CYS 545 1_555 A SG CYS 173 AAA CYS 560 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? disulf ? disulf4 A SG CYS 184 AAA CYS 571 1_555 A SG CYS 212 AAA CYS 599 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.061 ? # _chem_comp.formula 'C3 H8 O3' _chem_comp.formula_weight 92.094 _chem_comp.id GOL _chem_comp.mon_nstd_flag . _chem_comp.name GLYCEROL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms GLYCERIN;PROPANE-1,2,3-TRIOL # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 GOL sing 149 n n C1 C2 GOL sing 150 n n C1 H11 GOL sing 151 n n C1 H12 GOL sing 152 n n O1 HO1 GOL sing 153 n n C2 O2 GOL sing 154 n n C2 C3 GOL sing 155 n n C2 H2 GOL sing 156 n n O2 HO2 GOL sing 157 n n C3 O3 GOL sing 158 n n C3 H31 GOL sing 159 n n C3 H32 GOL sing 160 n n O3 HO3 GOL sing 161 n n # _atom_sites.entry_id 8BO6 _atom_sites.fract_transf_matrix[1][1] 0.016915 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.016769 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.014914 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 QW0 AAA 1 701 1 QW0 INX . C 3 CIT AAA 1 702 1 CIT CIT . D 4 GOL AAA 1 703 2 GOL GOL . E 4 GOL AAA 1 704 3 GOL GOL . F 4 GOL AAA 1 705 4 GOL GOL . G 4 GOL AAA 1 706 5 GOL GOL . H 5 HOH AAA 1 801 201 HOH HOH . H 5 HOH AAA 2 802 197 HOH HOH . H 5 HOH AAA 3 803 117 HOH HOH . H 5 HOH AAA 4 804 79 HOH HOH . H 5 HOH AAA 5 805 169 HOH HOH . H 5 HOH AAA 6 806 193 HOH HOH . H 5 HOH AAA 7 807 225 HOH HOH . H 5 HOH AAA 8 808 224 HOH HOH . H 5 HOH AAA 9 809 219 HOH HOH . H 5 HOH AAA 10 810 144 HOH HOH . H 5 HOH AAA 11 811 16 HOH HOH . H 5 HOH AAA 12 812 70 HOH HOH . H 5 HOH AAA 13 813 22 HOH HOH . H 5 HOH AAA 14 814 221 HOH HOH . H 5 HOH AAA 15 815 156 HOH HOH . H 5 HOH AAA 16 816 160 HOH HOH . H 5 HOH AAA 17 817 38 HOH HOH . H 5 HOH AAA 18 818 124 HOH HOH . H 5 HOH AAA 19 819 87 HOH HOH . H 5 HOH AAA 20 820 151 HOH HOH . H 5 HOH AAA 21 821 9 HOH HOH . H 5 HOH AAA 22 822 133 HOH HOH . H 5 HOH AAA 23 823 143 HOH HOH . H 5 HOH AAA 24 824 200 HOH HOH . H 5 HOH AAA 25 825 173 HOH HOH . H 5 HOH AAA 26 826 17 HOH HOH . H 5 HOH AAA 27 827 13 HOH HOH . H 5 HOH AAA 28 828 67 HOH HOH . H 5 HOH AAA 29 829 158 HOH HOH . H 5 HOH AAA 30 830 10 HOH HOH . H 5 HOH AAA 31 831 104 HOH HOH . H 5 HOH AAA 32 832 78 HOH HOH . H 5 HOH AAA 33 833 12 HOH HOH . H 5 HOH AAA 34 834 125 HOH HOH . H 5 HOH AAA 35 835 49 HOH HOH . H 5 HOH AAA 36 836 57 HOH HOH . H 5 HOH AAA 37 837 130 HOH HOH . H 5 HOH AAA 38 838 157 HOH HOH . H 5 HOH AAA 39 839 34 HOH HOH . H 5 HOH AAA 40 840 56 HOH HOH . H 5 HOH AAA 41 841 168 HOH HOH . H 5 HOH AAA 42 842 83 HOH HOH . H 5 HOH AAA 43 843 11 HOH HOH . H 5 HOH AAA 44 844 8 HOH HOH . H 5 HOH AAA 45 845 132 HOH HOH . H 5 HOH AAA 46 846 114 HOH HOH . H 5 HOH AAA 47 847 127 HOH HOH . H 5 HOH AAA 48 848 181 HOH HOH . H 5 HOH AAA 49 849 146 HOH HOH . H 5 HOH AAA 50 850 112 HOH HOH . H 5 HOH AAA 51 851 86 HOH HOH . H 5 HOH AAA 52 852 183 HOH HOH . H 5 HOH AAA 53 853 20 HOH HOH . H 5 HOH AAA 54 854 55 HOH HOH . H 5 HOH AAA 55 855 18 HOH HOH . H 5 HOH AAA 56 856 180 HOH HOH . H 5 HOH AAA 57 857 216 HOH HOH . H 5 HOH AAA 58 858 19 HOH HOH . H 5 HOH AAA 59 859 88 HOH HOH . H 5 HOH AAA 60 860 28 HOH HOH . H 5 HOH AAA 61 861 105 HOH HOH . H 5 HOH AAA 62 862 23 HOH HOH . H 5 HOH AAA 63 863 6 HOH HOH . H 5 HOH AAA 64 864 121 HOH HOH . H 5 HOH AAA 65 865 72 HOH HOH . H 5 HOH AAA 66 866 37 HOH HOH . H 5 HOH AAA 67 867 27 HOH HOH . H 5 HOH AAA 68 868 159 HOH HOH . H 5 HOH AAA 69 869 30 HOH HOH . H 5 HOH AAA 70 870 195 HOH HOH . H 5 HOH AAA 71 871 60 HOH HOH . H 5 HOH AAA 72 872 24 HOH HOH . H 5 HOH AAA 73 873 2 HOH HOH . H 5 HOH AAA 74 874 3 HOH HOH . H 5 HOH AAA 75 875 80 HOH HOH . H 5 HOH AAA 76 876 196 HOH HOH . H 5 HOH AAA 77 877 40 HOH HOH . H 5 HOH AAA 78 878 4 HOH HOH . H 5 HOH AAA 79 879 137 HOH HOH . H 5 HOH AAA 80 880 29 HOH HOH . H 5 HOH AAA 81 881 33 HOH HOH . H 5 HOH AAA 82 882 66 HOH HOH . H 5 HOH AAA 83 883 47 HOH HOH . H 5 HOH AAA 84 884 220 HOH HOH . H 5 HOH AAA 85 885 119 HOH HOH . H 5 HOH AAA 86 886 61 HOH HOH . H 5 HOH AAA 87 887 217 HOH HOH . H 5 HOH AAA 88 888 95 HOH HOH . H 5 HOH AAA 89 889 106 HOH HOH . H 5 HOH AAA 90 890 51 HOH HOH . H 5 HOH AAA 91 891 71 HOH HOH . H 5 HOH AAA 92 892 175 HOH HOH . H 5 HOH AAA 93 893 115 HOH HOH . H 5 HOH AAA 94 894 92 HOH HOH . H 5 HOH AAA 95 895 96 HOH HOH . H 5 HOH AAA 96 896 21 HOH HOH . H 5 HOH AAA 97 897 1 HOH HOH . H 5 HOH AAA 98 898 82 HOH HOH . H 5 HOH AAA 99 899 43 HOH HOH . H 5 HOH AAA 100 900 69 HOH HOH . H 5 HOH AAA 101 901 109 HOH HOH . H 5 HOH AAA 102 902 198 HOH HOH . H 5 HOH AAA 103 903 202 HOH HOH . H 5 HOH AAA 104 904 140 HOH HOH . H 5 HOH AAA 105 905 73 HOH HOH . H 5 HOH AAA 106 906 150 HOH HOH . H 5 HOH AAA 107 907 191 HOH HOH . H 5 HOH AAA 108 908 5 HOH HOH . H 5 HOH AAA 109 909 41 HOH HOH . H 5 HOH AAA 110 910 170 HOH HOH . H 5 HOH AAA 111 911 42 HOH HOH . H 5 HOH AAA 112 912 91 HOH HOH . H 5 HOH AAA 113 913 62 HOH HOH . H 5 HOH AAA 114 914 46 HOH HOH . H 5 HOH AAA 115 915 178 HOH HOH . H 5 HOH AAA 116 916 177 HOH HOH . H 5 HOH AAA 117 917 103 HOH HOH . H 5 HOH AAA 118 918 111 HOH HOH . H 5 HOH AAA 119 919 25 HOH HOH . H 5 HOH AAA 120 920 129 HOH HOH . H 5 HOH AAA 121 921 176 HOH HOH . H 5 HOH AAA 122 922 167 HOH HOH . H 5 HOH AAA 123 923 101 HOH HOH . H 5 HOH AAA 124 924 35 HOH HOH . H 5 HOH AAA 125 925 147 HOH HOH . H 5 HOH AAA 126 926 32 HOH HOH . H 5 HOH AAA 127 927 81 HOH HOH . H 5 HOH AAA 128 928 145 HOH HOH . H 5 HOH AAA 129 929 135 HOH HOH . H 5 HOH AAA 130 930 31 HOH HOH . H 5 HOH AAA 131 931 153 HOH HOH . H 5 HOH AAA 132 932 222 HOH HOH . H 5 HOH AAA 133 933 102 HOH HOH . H 5 HOH AAA 134 934 97 HOH HOH . H 5 HOH AAA 135 935 53 HOH HOH . H 5 HOH AAA 136 936 128 HOH HOH . H 5 HOH AAA 137 937 48 HOH HOH . H 5 HOH AAA 138 938 74 HOH HOH . H 5 HOH AAA 139 939 59 HOH HOH . H 5 HOH AAA 140 940 110 HOH HOH . H 5 HOH AAA 141 941 39 HOH HOH . H 5 HOH AAA 142 942 226 HOH HOH . H 5 HOH AAA 143 943 141 HOH HOH . H 5 HOH AAA 144 944 64 HOH HOH . H 5 HOH AAA 145 945 164 HOH HOH . H 5 HOH AAA 146 946 207 HOH HOH . H 5 HOH AAA 147 947 14 HOH HOH . H 5 HOH AAA 148 948 36 HOH HOH . H 5 HOH AAA 149 949 54 HOH HOH . H 5 HOH AAA 150 950 187 HOH HOH . H 5 HOH AAA 151 951 163 HOH HOH . H 5 HOH AAA 152 952 76 HOH HOH . H 5 HOH AAA 153 953 152 HOH HOH . H 5 HOH AAA 154 954 77 HOH HOH . H 5 HOH AAA 155 955 136 HOH HOH . H 5 HOH AAA 156 956 206 HOH HOH . H 5 HOH AAA 157 957 68 HOH HOH . H 5 HOH AAA 158 958 142 HOH HOH . H 5 HOH AAA 159 959 118 HOH HOH . H 5 HOH AAA 160 960 7 HOH HOH . H 5 HOH AAA 161 961 161 HOH HOH . H 5 HOH AAA 162 962 154 HOH HOH . H 5 HOH AAA 163 963 65 HOH HOH . H 5 HOH AAA 164 964 50 HOH HOH . H 5 HOH AAA 165 965 15 HOH HOH . H 5 HOH AAA 166 966 116 HOH HOH . H 5 HOH AAA 167 967 44 HOH HOH . H 5 HOH AAA 168 968 94 HOH HOH . H 5 HOH AAA 169 969 90 HOH HOH . H 5 HOH AAA 170 970 75 HOH HOH . H 5 HOH AAA 171 971 107 HOH HOH . H 5 HOH AAA 172 972 122 HOH HOH . H 5 HOH AAA 173 973 166 HOH HOH . H 5 HOH AAA 174 974 100 HOH HOH . H 5 HOH AAA 175 975 52 HOH HOH . H 5 HOH AAA 176 976 214 HOH HOH . H 5 HOH AAA 177 977 99 HOH HOH . H 5 HOH AAA 178 978 184 HOH HOH . H 5 HOH AAA 179 979 162 HOH HOH . H 5 HOH AAA 180 980 123 HOH HOH . H 5 HOH AAA 181 981 182 HOH HOH . H 5 HOH AAA 182 982 174 HOH HOH . H 5 HOH AAA 183 983 203 HOH HOH . H 5 HOH AAA 184 984 113 HOH HOH . H 5 HOH AAA 185 985 108 HOH HOH . H 5 HOH AAA 186 986 89 HOH HOH . H 5 HOH AAA 187 987 26 HOH HOH . H 5 HOH AAA 188 988 165 HOH HOH . H 5 HOH AAA 189 989 172 HOH HOH . H 5 HOH AAA 190 990 63 HOH HOH . H 5 HOH AAA 191 991 171 HOH HOH . H 5 HOH AAA 192 992 131 HOH HOH . H 5 HOH AAA 193 993 149 HOH HOH . H 5 HOH AAA 194 994 148 HOH HOH . H 5 HOH AAA 195 995 223 HOH HOH . H 5 HOH AAA 196 996 120 HOH HOH . H 5 HOH AAA 197 997 93 HOH HOH . H 5 HOH AAA 198 998 189 HOH HOH . H 5 HOH AAA 199 999 98 HOH HOH . H 5 HOH AAA 200 1000 85 HOH HOH . H 5 HOH AAA 201 1001 192 HOH HOH . H 5 HOH AAA 202 1002 210 HOH HOH . H 5 HOH AAA 203 1003 208 HOH HOH . H 5 HOH AAA 204 1004 134 HOH HOH . H 5 HOH AAA 205 1005 139 HOH HOH . H 5 HOH AAA 206 1006 188 HOH HOH . H 5 HOH AAA 207 1007 213 HOH HOH . H 5 HOH AAA 208 1008 227 HOH HOH . H 5 HOH AAA 209 1009 199 HOH HOH . H 5 HOH AAA 210 1010 205 HOH HOH . H 5 HOH AAA 211 1011 84 HOH HOH . H 5 HOH AAA 212 1012 45 HOH HOH . H 5 HOH AAA 213 1013 212 HOH HOH . H 5 HOH AAA 214 1014 186 HOH HOH . H 5 HOH AAA 215 1015 126 HOH HOH . H 5 HOH AAA 216 1016 194 HOH HOH . H 5 HOH AAA 217 1017 215 HOH HOH . H 5 HOH AAA 218 1018 138 HOH HOH . H 5 HOH AAA 219 1019 179 HOH HOH . H 5 HOH AAA 220 1020 58 HOH HOH . H 5 HOH AAA 221 1021 185 HOH HOH . H 5 HOH AAA 222 1022 204 HOH HOH . H 5 HOH AAA 223 1023 209 HOH HOH . H 5 HOH AAA 224 1024 190 HOH HOH . H 5 HOH AAA 225 1025 155 HOH HOH . H 5 HOH AAA 226 1026 211 HOH HOH . H 5 HOH AAA 227 1027 218 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 GOL . . . D 4 2.535 1.581 22.326 0.7 24.2 0 C1 GOL 703 AAA 1 HETATM 2 O O1 GOL . . . D 4 2.13 0.475 23.128 0.7 29.11 0 O1 GOL 703 AAA 1 HETATM 3 C C2 GOL . . . D 4 3.071 1.141 20.974 0.7 21.93 0 C2 GOL 703 AAA 1 HETATM 4 O O2 GOL . . . D 4 2.132 0.347 20.247 0.7 18.18 0 O2 GOL 703 AAA 1 HETATM 5 C C3 GOL . . . D 4 4.362 0.376 21.077 0.7 25.85 0 C3 GOL 703 AAA 1 HETATM 6 O O3 GOL . . . D 4 5.352 1.175 21.731 0.7 26.25 0 O3 GOL 703 AAA 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 307 _model_server_stats.encode_time_ms 8 _model_server_stats.element_count 6 #