data_8BPP
#
_model_server_result.job_id            cLfF7WqCDVwWowmd783IZQ 
_model_server_result.datetime_utc      '2024-11-16 10:08:21' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          8bpp 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"F","auth_seq_id":401}' 
#
_entry.id    8BPP 
#
_exptl.entry_id    8BPP 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              456.344 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'FLAVIN MONONUCLEOTIDE' 
_entity.pdbx_number_of_molecules    3 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          107.02 
_cell.angle_gamma         90 
_cell.entry_id            8BPP 
_cell.length_a            128.488 
_cell.length_b            142.069 
_cell.length_c            87.871 
_cell.Z_PDB               12 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 8BPP 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        5 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'C 1 2 1' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
? monomeric 1 author_defined_assembly 1 
? monomeric 1 author_defined_assembly 2 
? monomeric 1 author_defined_assembly 3 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,D,G 1 1 
B,E,H 2 1 
C,F,I 3 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 D N N 
? 2 E N N 
? 2 F N N 
#
_chem_comp.formula           'C17 H21 N4 O9 P' 
_chem_comp.formula_weight    456.344 
_chem_comp.id                FMN 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'FLAVIN MONONUCLEOTIDE' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     'RIBOFLAVIN MONOPHOSPHATE' 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
N1 C2 FMN sing 70 n n 
N1 C10 FMN doub 71 n n 
C2 O2 FMN doub 72 n n 
C2 N3 FMN sing 73 n n 
N3 C4 FMN sing 74 n n 
N3 HN3 FMN sing 75 n n 
C4 O4 FMN doub 76 n n 
C4 C4A FMN sing 77 n n 
C4A N5 FMN doub 78 n n 
C4A C10 FMN sing 79 n n 
N5 C5A FMN sing 80 n n 
C5A C6 FMN doub 81 n y 
C5A C9A FMN sing 82 n y 
C6 C7 FMN sing 83 n y 
C6 H6 FMN sing 84 n n 
C7 C7M FMN sing 85 n n 
C7 C8 FMN doub 86 n y 
C7M HM71 FMN sing 87 n n 
C7M HM72 FMN sing 88 n n 
C7M HM73 FMN sing 89 n n 
C8 C8M FMN sing 90 n n 
C8 C9 FMN sing 91 n y 
C8M HM81 FMN sing 92 n n 
C8M HM82 FMN sing 93 n n 
C8M HM83 FMN sing 94 n n 
C9 C9A FMN doub 95 n y 
C9 H9 FMN sing 96 n n 
C9A N10 FMN sing 97 n n 
N10 C10 FMN sing 98 n n 
N10 C1' FMN sing 99 n n 
C1' C2' FMN sing 100 n n 
C1' "H1'1" FMN sing 101 n n 
C1' "H1'2" FMN sing 102 n n 
C2' O2' FMN sing 103 n n 
C2' C3' FMN sing 104 n n 
C2' H2' FMN sing 105 n n 
O2' HO2' FMN sing 106 n n 
C3' O3' FMN sing 107 n n 
C3' C4' FMN sing 108 n n 
C3' H3' FMN sing 109 n n 
O3' HO3' FMN sing 110 n n 
C4' O4' FMN sing 111 n n 
C4' C5' FMN sing 112 n n 
C4' H4' FMN sing 113 n n 
O4' HO4' FMN sing 114 n n 
C5' O5' FMN sing 115 n n 
C5' "H5'1" FMN sing 116 n n 
C5' "H5'2" FMN sing 117 n n 
O5' P FMN sing 118 n n 
P O1P FMN doub 119 n n 
P O2P FMN sing 120 n n 
P O3P FMN sing 121 n n 
O2P HOP2 FMN sing 122 n n 
O3P HOP3 FMN sing 123 n n 
#
_atom_sites.entry_id                     8BPP 
_atom_sites.fract_transf_matrix[1][1]    0.007783 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.002382 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.007039 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.011902 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
D 2 FMN A 1 401 384 FMN FMN . 
E 2 FMN B 1 401 384 FMN FMN . 
F 2 FMN C 1 401 384 FMN FMN . 
G 3 HOH A 1 501 16 HOH HOH . 
G 3 HOH A 2 502 30 HOH HOH . 
G 3 HOH A 3 503 28 HOH HOH . 
G 3 HOH A 4 504 11 HOH HOH . 
G 3 HOH A 5 505 31 HOH HOH . 
G 3 HOH A 6 506 20 HOH HOH . 
G 3 HOH A 7 507 3 HOH HOH . 
G 3 HOH A 8 508 23 HOH HOH . 
G 3 HOH A 9 509 2 HOH HOH . 
G 3 HOH A 10 510 12 HOH HOH . 
G 3 HOH A 11 511 6 HOH HOH . 
G 3 HOH A 12 512 14 HOH HOH . 
G 3 HOH A 13 513 1 HOH HOH . 
H 3 HOH B 1 501 15 HOH HOH . 
H 3 HOH B 2 502 5 HOH HOH . 
H 3 HOH B 3 503 10 HOH HOH . 
H 3 HOH B 4 504 25 HOH HOH . 
H 3 HOH B 5 505 26 HOH HOH . 
H 3 HOH B 6 506 9 HOH HOH . 
H 3 HOH B 7 507 34 HOH HOH . 
H 3 HOH B 8 508 27 HOH HOH . 
H 3 HOH B 9 509 13 HOH HOH . 
H 3 HOH B 10 510 35 HOH HOH . 
H 3 HOH B 11 511 32 HOH HOH . 
I 3 HOH C 1 501 4 HOH HOH . 
I 3 HOH C 2 502 22 HOH HOH . 
I 3 HOH C 3 503 19 HOH HOH . 
I 3 HOH C 4 504 29 HOH HOH . 
I 3 HOH C 5 505 18 HOH HOH . 
I 3 HOH C 6 506 24 HOH HOH . 
I 3 HOH C 7 507 21 HOH HOH . 
I 3 HOH C 8 508 8 HOH HOH . 
I 3 HOH C 9 509 7 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 N N1 FMN . . . F 2 23.675 44.407 8.659 1 33.83 ? N1 FMN 401 C 1 
HETATM 2 C C2 FMN . . . F 2 23.593 42.931 8.513 1 37.68 ? C2 FMN 401 C 1 
HETATM 3 O O2 FMN . . . F 2 22.958 42.454 7.632 1 40.72 ? O2 FMN 401 C 1 
HETATM 4 N N3 FMN . . . F 2 24.308 42.044 9.476 1 40.26 ? N3 FMN 401 C 1 
HETATM 5 C C4 FMN . . . F 2 25.089 42.636 10.558 1 37.69 ? C4 FMN 401 C 1 
HETATM 6 O O4 FMN . . . F 2 25.663 41.944 11.33 1 40.25 ? O4 FMN 401 C 1 
HETATM 7 C C4A FMN . . . F 2 25.163 44.15 10.692 1 37.64 ? C4A FMN 401 C 1 
HETATM 8 N N5 FMN . . . F 2 25.946 44.743 11.773 1 41.61 ? N5 FMN 401 C 1 
HETATM 9 C C5A FMN . . . F 2 25.995 46.234 11.932 1 37.1 ? C5A FMN 401 C 1 
HETATM 10 C C6 FMN . . . F 2 26.728 46.794 12.997 1 38.39 ? C6 FMN 401 C 1 
HETATM 11 C C7 FMN . . . F 2 26.775 48.187 13.15 1 45.94 ? C7 FMN 401 C 1 
HETATM 12 C C7M FMN . . . F 2 27.631 48.6 14.38 1 50.08 ? C7M FMN 401 C 1 
HETATM 13 C C8 FMN . . . F 2 26.092 49.021 12.241 1 42.55 ? C8 FMN 401 C 1 
HETATM 14 C C8M FMN . . . F 2 26.101 50.564 12.348 1 50.08 ? C8M FMN 401 C 1 
HETATM 15 C C9 FMN . . . F 2 25.361 48.465 11.179 1 38.81 ? C9 FMN 401 C 1 
HETATM 16 C C9A FMN . . . F 2 25.31 47.065 11.023 1 36.71 ? C9A FMN 401 C 1 
HETATM 17 N N10 FMN . . . F 2 24.537 46.458 9.888 1 37.21 ? N10 FMN 401 C 1 
HETATM 18 C C10 FMN . . . F 2 24.463 45.003 9.75 1 36.72 ? C10 FMN 401 C 1 
HETATM 19 C C1' FMN . . . F 2 23.81 47.317 8.929 1 37.14 ? C1' FMN 401 C 1 
HETATM 20 C C2' FMN . . . F 2 22.395 47.587 9.476 1 47.21 ? C2' FMN 401 C 1 
HETATM 21 O O2' FMN . . . F 2 21.663 46.403 9.452 1 48.69 ? O2' FMN 401 C 1 
HETATM 22 C C3' FMN . . . F 2 21.682 48.626 8.615 1 50.29 ? C3' FMN 401 C 1 
HETATM 23 O O3' FMN . . . F 2 21.593 48.159 7.302 1 54.07 ? O3' FMN 401 C 1 
HETATM 24 C C4' FMN . . . F 2 22.45 49.953 8.628 1 41.43 ? C4' FMN 401 C 1 
HETATM 25 O O4' FMN . . . F 2 22.945 50.214 9.909 1 35.79 ? O4' FMN 401 C 1 
HETATM 26 C C5' FMN . . . F 2 21.499 51.074 8.208 1 40.8 ? C5' FMN 401 C 1 
HETATM 27 O O5' FMN . . . F 2 21.963 52.302 8.736 1 54.82 ? O5' FMN 401 C 1 
HETATM 28 P P FMN . . . F 2 21.02 53.093 9.862 1 50.74 ? P FMN 401 C 1 
HETATM 29 O O1P FMN . . . F 2 21.563 52.828 11.245 1 41.26 ? O1P FMN 401 C 1 
HETATM 30 O O2P FMN . . . F 2 19.598 52.594 9.77 1 45.54 ? O2P FMN 401 C 1 
HETATM 31 O O3P FMN . . . F 2 21.054 54.58 9.579 1 54.96 ? O3P FMN 401 C 1 
#
_model_server_stats.io_time_ms              12 
_model_server_stats.parse_time_ms           11 
_model_server_stats.create_model_time_ms    21 
_model_server_stats.query_time_ms           273 
_model_server_stats.encode_time_ms          1 
_model_server_stats.element_count           31 
#