data_8BRC # _model_server_result.job_id Y1CG_uP6W9jq-cQtB86GsA _model_server_result.datetime_utc '2024-11-05 21:03:43' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8brc # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":705}' # _entry.id 8BRC # _exptl.entry_id 8BRC _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 17.031 _entity.id 6 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description AMMONIA _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 8BRC _cell.length_a 136.34 _cell.length_b 156.4 _cell.length_c 107.44 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8BRC _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 2 2 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 6 F N N ? 6 G N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 9 A CYS 9 1_555 A SG CYS 48 A CYS 48 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.061 ? disulf ? disulf2 A SG CYS 19 A CYS 19 1_555 A SG CYS 39 A CYS 39 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.073 ? disulf ? disulf3 A SG CYS 118 A CYS 118 1_555 A SG CYS 194 A CYS 194 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.077 ? disulf ? disulf4 A SG CYS 137 A CYS 137 1_555 A SG CYS 331 A CYS 331 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.052 ? disulf ? disulf5 A SG CYS 158 A CYS 158 1_555 A SG CYS 174 A CYS 174 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.047 ? disulf ? disulf6 A SG CYS 161 A CYS 161 1_555 A SG CYS 179 A CYS 179 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.035 ? disulf ? disulf7 A SG CYS 171 A CYS 171 1_555 A SG CYS 177 A CYS 177 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.052 ? disulf ? disulf8 A SG CYS 227 A CYS 227 1_555 A SG CYS 241 A CYS 241 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.043 ? disulf ? disulf9 A SG CYS 339 A CYS 339 1_555 A SG CYS 596 A CYS 596 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.04 ? disulf ? disulf10 A SG CYS 345 A CYS 345 1_555 A SG CYS 377 A CYS 377 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.053 ? disulf ? disulf11 A SG CYS 355 A CYS 355 1_555 A SG CYS 368 A CYS 368 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.041 ? disulf ? disulf12 A SG CYS 402 A CYS 402 1_555 A SG CYS 674 A CYS 674 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? disulf ? disulf13 A SG CYS 418 A CYS 418 1_555 A SG CYS 637 A CYS 637 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.045 ? disulf ? disulf14 A SG CYS 450 A CYS 450 1_555 A SG CYS 523 A CYS 523 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.061 ? disulf ? disulf15 A SG CYS 474 A CYS 474 1_555 A SG CYS 665 A CYS 665 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.048 ? disulf ? disulf16 A SG CYS 484 A CYS 484 1_555 A SG CYS 498 A CYS 498 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.072 ? disulf ? disulf17 A SG CYS 495 A CYS 495 1_555 A SG CYS 506 A CYS 506 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.041 ? disulf ? disulf18 A SG CYS 563 A CYS 563 1_555 A SG CYS 577 A CYS 577 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.041 ? disulf ? disulf19 A SG CYS 615 A CYS 615 1_555 A SG CYS 620 A CYS 620 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? covale ? covale1 A ND2 ASN 413 A ASN 413 1_555 D C1 NAG . A NAG 703 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.442 ? metalc ? metalc1 A SD MET 256 A MET 256 1_555 E PT PT . A PT 704 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.2 ? metalc ? metalc2 A OD1 ASP 392 A ASP 392 1_555 B FE FE . A FE 701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.486 ? metalc ? metalc3 A OH TYR 426 A TYR 426 1_555 B FE FE . A FE 701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.251 ? metalc ? metalc4 A OH TYR 517 A TYR 517 1_555 B FE FE . A FE 701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.976 ? metalc ? metalc5 A NE2 HIS 585 A HIS 585 1_555 B FE FE . A FE 701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.229 ? metalc ? metalc6 B FE FE . A FE 701 1_555 C O7 MLI . A MLI 702 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.966 ? metalc ? metalc7 B FE FE . A FE 701 1_555 C O9 MLI . A MLI 702 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.967 ? metalc ? metalc8 E PT PT . A PT 704 1_555 F N NH3 . A NH3 705 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.035 ? metalc ? metalc9 E PT PT . A PT 704 1_555 G N NH3 . A NH3 706 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.105 ? metalc ? metalc10 E PT PT . A PT 704 1_555 H O HOH . A HOH 827 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.101 ? # _chem_comp.formula 'H3 N' _chem_comp.formula_weight 17.031 _chem_comp.id NH3 _chem_comp.mon_nstd_flag . _chem_comp.name AMMONIA _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N HN1 NH3 sing 275 n n N HN2 NH3 sing 276 n n N HN3 NH3 sing 277 n n # _atom_sites.entry_id 8BRC _atom_sites.fract_transf_matrix[1][1] 0.007335 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.006394 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009308 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 FE A 1 701 701 FE FE . C 3 MLI A 1 702 702 MLI MLI . D 4 NAG A 1 703 703 NAG NAG . E 5 PT A 1 704 1 PT PT . F 6 NH3 A 1 705 2 NH3 NH3 . G 6 NH3 A 1 706 3 NH3 NH3 . H 7 HOH A 1 801 814 HOH HOH . H 7 HOH A 2 802 806 HOH HOH . H 7 HOH A 3 803 804 HOH HOH . H 7 HOH A 4 804 835 HOH HOH . H 7 HOH A 5 805 811 HOH HOH . H 7 HOH A 6 806 815 HOH HOH . H 7 HOH A 7 807 822 HOH HOH . H 7 HOH A 8 808 821 HOH HOH . H 7 HOH A 9 809 826 HOH HOH . H 7 HOH A 10 810 836 HOH HOH . H 7 HOH A 11 811 817 HOH HOH . H 7 HOH A 12 812 808 HOH HOH . H 7 HOH A 13 813 805 HOH HOH . H 7 HOH A 14 814 823 HOH HOH . H 7 HOH A 15 815 810 HOH HOH . H 7 HOH A 16 816 813 HOH HOH . H 7 HOH A 17 817 831 HOH HOH . H 7 HOH A 18 818 827 HOH HOH . H 7 HOH A 19 819 812 HOH HOH . H 7 HOH A 20 820 803 HOH HOH . H 7 HOH A 21 821 825 HOH HOH . H 7 HOH A 22 822 816 HOH HOH . H 7 HOH A 23 823 807 HOH HOH . H 7 HOH A 24 824 830 HOH HOH . H 7 HOH A 25 825 832 HOH HOH . H 7 HOH A 26 826 829 HOH HOH . H 7 HOH A 27 827 4 HOH HOH . H 7 HOH A 28 828 833 HOH HOH . H 7 HOH A 29 829 834 HOH HOH . H 7 HOH A 30 830 802 HOH HOH . H 7 HOH A 31 831 824 HOH HOH . H 7 HOH A 32 832 809 HOH HOH . H 7 HOH A 33 833 820 HOH HOH . H 7 HOH A 34 834 818 HOH HOH . H 7 HOH A 35 835 819 HOH HOH . H 7 HOH A 36 836 828 HOH HOH . H 7 HOH A 37 837 801 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol N _atom_site.label_atom_id N _atom_site.label_comp_id NH3 _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id F _atom_site.label_entity_id 6 _atom_site.Cartn_x 34.578 _atom_site.Cartn_y 14.866 _atom_site.Cartn_z -17.857 _atom_site.occupancy 0.6 _atom_site.B_iso_or_equiv 198.22 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id N _atom_site.auth_comp_id NH3 _atom_site.auth_seq_id 705 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 12 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 22 _model_server_stats.query_time_ms 338 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 1 #