data_8BRL
#
_model_server_result.job_id            wv3VeuSVAphZphb6-Y2sBQ 
_model_server_result.datetime_utc      '2024-12-02 13:27:10' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          8brl 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"B","auth_seq_id":201}' 
#
_entry.id    8BRL 
#
_exptl.entry_id    8BRL 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              618.503 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'HEME C' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            8BRL 
_cell.length_a            83.536 
_cell.length_b            83.536 
_cell.length_c            88.566 
_cell.Z_PDB               12 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 8BRL 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        180 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 62 2 2' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1,2 
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 
2 'crystal symmetry operation' 4_565 -x,-y+1,z -1 0 0 0 -1 0 0 0 1 -41.768 72.344298 0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      2 
_struct_asym.id                             B 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
covale ? covale1 A SG CYS 124 D CYS 124 1_555 B CAB HEC . D HEC 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.815 ? 
covale ? covale2 A SG CYS 127 D CYS 127 1_555 B CAC HEC . D HEC 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.788 ? 
metalc ? metalc1 A NE2 HIS 128 D HIS 128 1_555 B FE HEC . D HEC 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? 
#
_chem_comp.formula           'C34 H34 Fe N4 O4' 
_chem_comp.formula_weight    618.503 
_chem_comp.id                HEC 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'HEME C' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
FE NA HEC sing 129 n n 
FE NB HEC sing 130 n n 
FE NC HEC sing 131 n n 
FE ND HEC sing 132 n n 
CHA C1A HEC doub 133 n n 
CHA C4D HEC sing 134 n n 
CHA HHA HEC sing 135 n n 
CHB C4A HEC doub 136 n n 
CHB C1B HEC sing 137 n n 
CHB HHB HEC sing 138 n n 
CHC C4B HEC doub 139 n n 
CHC C1C HEC sing 140 n n 
CHC HHC HEC sing 141 n n 
CHD C4C HEC doub 142 n n 
CHD C1D HEC sing 143 n n 
CHD HHD HEC sing 144 n n 
NA C1A HEC sing 145 n y 
NA C4A HEC sing 146 n y 
C1A C2A HEC sing 147 n y 
C2A C3A HEC doub 148 n y 
C2A CAA HEC sing 149 n n 
C3A C4A HEC sing 150 n y 
C3A CMA HEC sing 151 n n 
CMA HMA1 HEC sing 152 n n 
CMA HMA2 HEC sing 153 n n 
CMA HMA3 HEC sing 154 n n 
CAA CBA HEC sing 155 n n 
CAA HAA1 HEC sing 156 n n 
CAA HAA2 HEC sing 157 n n 
CBA CGA HEC sing 158 n n 
CBA HBA1 HEC sing 159 n n 
CBA HBA2 HEC sing 160 n n 
CGA O1A HEC doub 161 n n 
CGA O2A HEC sing 162 n n 
O2A H2A HEC sing 163 n n 
NB C1B HEC sing 164 n y 
NB C4B HEC sing 165 n y 
C1B C2B HEC doub 166 n y 
C2B C3B HEC sing 167 n y 
C2B CMB HEC sing 168 n n 
C3B C4B HEC sing 169 n y 
C3B CAB HEC doub 170 e n 
CMB HMB1 HEC sing 171 n n 
CMB HMB2 HEC sing 172 n n 
CMB HMB3 HEC sing 173 n n 
CAB CBB HEC sing 174 n n 
CAB HAB HEC sing 175 n n 
CBB HBB1 HEC sing 176 n n 
CBB HBB2 HEC sing 177 n n 
CBB HBB3 HEC sing 178 n n 
NC C1C HEC sing 179 n y 
NC C4C HEC sing 180 n y 
C1C C2C HEC doub 181 n y 
C2C C3C HEC sing 182 n y 
C2C CMC HEC sing 183 n n 
C3C C4C HEC sing 184 n y 
C3C CAC HEC doub 185 e n 
CMC HMC1 HEC sing 186 n n 
CMC HMC2 HEC sing 187 n n 
CMC HMC3 HEC sing 188 n n 
CAC CBC HEC sing 189 n n 
CAC HAC HEC sing 190 n n 
CBC HBC1 HEC sing 191 n n 
CBC HBC2 HEC sing 192 n n 
CBC HBC3 HEC sing 193 n n 
ND C1D HEC sing 194 n y 
ND C4D HEC sing 195 n y 
C1D C2D HEC doub 196 n y 
C2D C3D HEC sing 197 n y 
C2D CMD HEC sing 198 n n 
C3D C4D HEC doub 199 n y 
C3D CAD HEC sing 200 n n 
CMD HMD1 HEC sing 201 n n 
CMD HMD2 HEC sing 202 n n 
CMD HMD3 HEC sing 203 n n 
CAD CBD HEC sing 204 n n 
CAD HAD1 HEC sing 205 n n 
CAD HAD2 HEC sing 206 n n 
CBD CGD HEC sing 207 n n 
CBD HBD1 HEC sing 208 n n 
CBD HBD2 HEC sing 209 n n 
CGD O1D HEC doub 210 n n 
CGD O2D HEC sing 211 n n 
O2D H2D HEC sing 212 n n 
#
_atom_sites.entry_id                     8BRL 
_atom_sites.fract_transf_matrix[1][1]    0.011971 
_atom_sites.fract_transf_matrix[1][2]    0.006911 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.013823 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.011291 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 HEC D 1 201 201 HEC HEC . 
C 3 SO4 D 1 202 1 SO4 SO4 . 
D 4 HOH D 1 301 12 HOH HOH . 
D 4 HOH D 2 302 22 HOH HOH . 
D 4 HOH D 3 303 11 HOH HOH . 
D 4 HOH D 4 304 29 HOH HOH . 
D 4 HOH D 5 305 46 HOH HOH . 
D 4 HOH D 6 306 26 HOH HOH . 
D 4 HOH D 7 307 4 HOH HOH . 
D 4 HOH D 8 308 9 HOH HOH . 
D 4 HOH D 9 309 42 HOH HOH . 
D 4 HOH D 10 310 2 HOH HOH . 
D 4 HOH D 11 311 14 HOH HOH . 
D 4 HOH D 12 312 45 HOH HOH . 
D 4 HOH D 13 313 7 HOH HOH . 
D 4 HOH D 14 314 25 HOH HOH . 
D 4 HOH D 15 315 5 HOH HOH . 
D 4 HOH D 16 316 24 HOH HOH . 
D 4 HOH D 17 317 21 HOH HOH . 
D 4 HOH D 18 318 44 HOH HOH . 
D 4 HOH D 19 319 40 HOH HOH . 
D 4 HOH D 20 320 3 HOH HOH . 
D 4 HOH D 21 321 33 HOH HOH . 
D 4 HOH D 22 322 38 HOH HOH . 
D 4 HOH D 23 323 37 HOH HOH . 
D 4 HOH D 24 324 13 HOH HOH . 
D 4 HOH D 25 325 19 HOH HOH . 
D 4 HOH D 26 326 18 HOH HOH . 
D 4 HOH D 27 327 16 HOH HOH . 
D 4 HOH D 28 328 31 HOH HOH . 
D 4 HOH D 29 329 36 HOH HOH . 
D 4 HOH D 30 330 6 HOH HOH . 
D 4 HOH D 31 331 8 HOH HOH . 
D 4 HOH D 32 332 23 HOH HOH . 
D 4 HOH D 33 333 15 HOH HOH . 
D 4 HOH D 34 334 32 HOH HOH . 
D 4 HOH D 35 335 27 HOH HOH . 
D 4 HOH D 36 336 1 HOH HOH . 
D 4 HOH D 37 337 34 HOH HOH . 
D 4 HOH D 38 338 39 HOH HOH . 
D 4 HOH D 39 339 30 HOH HOH . 
D 4 HOH D 40 340 20 HOH HOH . 
D 4 HOH D 41 341 35 HOH HOH . 
D 4 HOH D 42 342 43 HOH HOH . 
D 4 HOH D 43 343 41 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 FE FE HEC . . . B 2 -30.543 30.197 -11.937 1 20.79 ? FE HEC 201 D 1 
HETATM 2 C CHA HEC . . . B 2 -29.732 31.247 -15.135 1 20.43 ? CHA HEC 201 D 1 
HETATM 3 C CHB HEC . . . B 2 -27.592 28.482 -11.742 1 20.89 ? CHB HEC 201 D 1 
HETATM 4 C CHC HEC . . . B 2 -31.043 29.816 -8.624 1 18.75 ? CHC HEC 201 D 1 
HETATM 5 C CHD HEC . . . B 2 -33.527 31.936 -12.114 1 19.85 ? CHD HEC 201 D 1 
HETATM 6 N NA HEC . . . B 2 -28.931 29.933 -13.211 1 20.69 ? NA HEC 201 D 1 
HETATM 7 C C1A HEC . . . B 2 -28.777 30.381 -14.449 1 19.48 ? C1A HEC 201 D 1 
HETATM 8 C C2A HEC . . . B 2 -27.554 29.992 -15.081 1 23.96 ? C2A HEC 201 D 1 
HETATM 9 C C3A HEC . . . B 2 -26.926 29.126 -14.087 1 21.88 ? C3A HEC 201 D 1 
HETATM 10 C C4A HEC . . . B 2 -27.862 29.195 -12.978 1 21.87 ? C4A HEC 201 D 1 
HETATM 11 C CMA HEC . . . B 2 -25.621 28.396 -14.171 1 23.55 ? CMA HEC 201 D 1 
HETATM 12 C CAA HEC . . . B 2 -27.102 30.33 -16.48 1 26.8 ? CAA HEC 201 D 1 
HETATM 13 C CBA HEC . . . B 2 -26.36 31.651 -16.405 1 37.94 ? CBA HEC 201 D 1 
HETATM 14 C CGA HEC . . . B 2 -25.753 32.074 -17.766 1 45.85 ? CGA HEC 201 D 1 
HETATM 15 O O1A HEC . . . B 2 -24.537 32.408 -17.793 1 54.71 ? O1A HEC 201 D 1 
HETATM 16 O O2A HEC . . . B 2 -26.468 32.083 -18.806 1 58.37 ? O2A HEC 201 D 1 
HETATM 17 N NB HEC . . . B 2 -29.462 29.305 -10.452 1 19.96 ? NB HEC 201 D 1 
HETATM 18 C C1B HEC . . . B 2 -28.337 28.613 -10.52 1 19.88 ? C1B HEC 201 D 1 
HETATM 19 C C2B HEC . . . B 2 -27.899 27.976 -9.273 1 19.01 ? C2B HEC 201 D 1 
HETATM 20 C C3B HEC . . . B 2 -28.921 28.432 -8.35 1 18.59 ? C3B HEC 201 D 1 
HETATM 21 C C4B HEC . . . B 2 -29.829 29.225 -9.166 1 19.61 ? C4B HEC 201 D 1 
HETATM 22 C CMB HEC . . . B 2 -26.662 27.165 -9.035 1 20.85 ? CMB HEC 201 D 1 
HETATM 23 C CAB HEC . . . B 2 -29.043 28.078 -6.913 1 21.31 ? CAB HEC 201 D 1 
HETATM 24 C CBB HEC . . . B 2 -27.736 28.106 -6.142 1 21.77 ? CBB HEC 201 D 1 
HETATM 25 N NC HEC . . . B 2 -31.995 30.808 -10.594 1 21.58 ? NC HEC 201 D 1 
HETATM 26 C C1C HEC . . . B 2 -32.035 30.574 -9.292 1 19.64 ? C1C HEC 201 D 1 
HETATM 27 C C2C HEC . . . B 2 -33.253 31.024 -8.578 1 21.28 ? C2C HEC 201 D 1 
HETATM 28 C C3C HEC . . . B 2 -33.985 31.647 -9.639 1 19.5 ? C3C HEC 201 D 1 
HETATM 29 C C4C HEC . . . B 2 -33.158 31.429 -10.823 1 20.83 ? C4C HEC 201 D 1 
HETATM 30 C CMC HEC . . . B 2 -33.483 30.822 -7.121 1 22.92 ? CMC HEC 201 D 1 
HETATM 31 C CAC HEC . . . B 2 -35.335 32.303 -9.663 1 22.72 ? CAC HEC 201 D 1 
HETATM 32 C CBC HEC . . . B 2 -35.825 32.792 -8.328 1 22.93 ? CBC HEC 201 D 1 
HETATM 33 N ND HEC . . . B 2 -31.467 31.351 -13.339 1 20.28 ? ND HEC 201 D 1 
HETATM 34 C C1D HEC . . . B 2 -32.641 31.958 -13.243 1 21.46 ? C1D HEC 201 D 1 
HETATM 35 C C2D HEC . . . B 2 -33.083 32.691 -14.457 1 20.93 ? C2D HEC 201 D 1 
HETATM 36 C C3D HEC . . . B 2 -31.939 32.503 -15.352 1 21.76 ? C3D HEC 201 D 1 
HETATM 37 C C4D HEC . . . B 2 -31.018 31.676 -14.57 1 19.46 ? C4D HEC 201 D 1 
HETATM 38 C CMD HEC . . . B 2 -34.326 33.479 -14.645 1 21.38 ? CMD HEC 201 D 1 
HETATM 39 C CAD HEC . . . B 2 -31.76 33.09 -16.736 1 23.12 ? CAD HEC 201 D 1 
HETATM 40 C CBD HEC . . . B 2 -31.115 34.453 -16.498 1 20.58 ? CBD HEC 201 D 1 
HETATM 41 C CGD HEC . . . B 2 -30.995 35.142 -17.797 1 20.03 ? CGD HEC 201 D 1 
HETATM 42 O O1D HEC . . . B 2 -30.484 34.497 -18.729 1 20.21 ? O1D HEC 201 D 1 
HETATM 43 O O2D HEC . . . B 2 -31.413 36.319 -17.849 1 22.64 ? O2D HEC 201 D 1 
#
_model_server_stats.io_time_ms              8 
_model_server_stats.parse_time_ms           14 
_model_server_stats.create_model_time_ms    2 
_model_server_stats.query_time_ms           267 
_model_server_stats.encode_time_ms          5 
_model_server_stats.element_count           43 
#