data_8BS4 # _model_server_result.job_id QKS6xJ49fyYX-7okqDc6SQ _model_server_result.datetime_utc '2024-11-29 04:07:55' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8bs4 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":601}' # _entry.id 8BS4 # _exptl.entry_id 8BS4 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 92.094 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description GLYCEROL _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 8BS4 _cell.length_a 91.85 _cell.length_b 91.85 _cell.length_c 206.89 _cell.Z_PDB 24 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8BS4 _symmetry.cell_setting ? _symmetry.Int_Tables_number 179 _symmetry.space_group_name_Hall 'P 65 2 (x,y,z+1/12)' _symmetry.space_group_name_H-M 'P 65 2 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id D _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C3 H8 O3' _chem_comp.formula_weight 92.094 _chem_comp.id GOL _chem_comp.mon_nstd_flag . _chem_comp.name GLYCEROL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms GLYCERIN;PROPANE-1,2,3-TRIOL # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 GOL sing 135 n n C1 C2 GOL sing 136 n n C1 H11 GOL sing 137 n n C1 H12 GOL sing 138 n n O1 HO1 GOL sing 139 n n C2 O2 GOL sing 140 n n C2 C3 GOL sing 141 n n C2 H2 GOL sing 142 n n O2 HO2 GOL sing 143 n n C3 O3 GOL sing 144 n n C3 H31 GOL sing 145 n n C3 H32 GOL sing 146 n n O3 HO3 GOL sing 147 n n # _atom_sites.entry_id 8BS4 _atom_sites.fract_transf_matrix[1][1] 0.010887 _atom_sites.fract_transf_matrix[1][2] 0.006286 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012572 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.004833 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 ACT A 1 601 601 ACT ACT . D 3 GOL B 1 601 601 GOL GOL . E 4 HOH A 1 701 35 HOH HOH . E 4 HOH A 2 702 111 HOH HOH . E 4 HOH A 3 703 30 HOH HOH . E 4 HOH A 4 704 20 HOH HOH . E 4 HOH A 5 705 91 HOH HOH . E 4 HOH A 6 706 54 HOH HOH . E 4 HOH A 7 707 6 HOH HOH . E 4 HOH A 8 708 55 HOH HOH . E 4 HOH A 9 709 24 HOH HOH . E 4 HOH A 10 710 5 HOH HOH . E 4 HOH A 11 711 21 HOH HOH . E 4 HOH A 12 712 37 HOH HOH . E 4 HOH A 13 713 171 HOH HOH . E 4 HOH A 14 714 1 HOH HOH . E 4 HOH A 15 715 110 HOH HOH . E 4 HOH A 16 716 109 HOH HOH . E 4 HOH A 17 717 11 HOH HOH . E 4 HOH A 18 718 23 HOH HOH . E 4 HOH A 19 719 26 HOH HOH . E 4 HOH A 20 720 41 HOH HOH . E 4 HOH A 21 721 9 HOH HOH . E 4 HOH A 22 722 32 HOH HOH . E 4 HOH A 23 723 65 HOH HOH . E 4 HOH A 24 724 36 HOH HOH . E 4 HOH A 25 725 7 HOH HOH . E 4 HOH A 26 726 73 HOH HOH . E 4 HOH A 27 727 46 HOH HOH . E 4 HOH A 28 728 56 HOH HOH . E 4 HOH A 29 729 72 HOH HOH . E 4 HOH A 30 730 172 HOH HOH . E 4 HOH A 31 731 115 HOH HOH . E 4 HOH A 32 732 31 HOH HOH . E 4 HOH A 33 733 130 HOH HOH . E 4 HOH A 34 734 75 HOH HOH . E 4 HOH A 35 735 4 HOH HOH . E 4 HOH A 36 736 50 HOH HOH . E 4 HOH A 37 737 89 HOH HOH . E 4 HOH A 38 738 67 HOH HOH . E 4 HOH A 39 739 59 HOH HOH . E 4 HOH A 40 740 34 HOH HOH . E 4 HOH A 41 741 40 HOH HOH . E 4 HOH A 42 742 131 HOH HOH . E 4 HOH A 43 743 52 HOH HOH . E 4 HOH A 44 744 177 HOH HOH . E 4 HOH A 45 745 103 HOH HOH . E 4 HOH A 46 746 114 HOH HOH . E 4 HOH A 47 747 51 HOH HOH . E 4 HOH A 48 748 106 HOH HOH . E 4 HOH A 49 749 28 HOH HOH . E 4 HOH A 50 750 87 HOH HOH . E 4 HOH A 51 751 117 HOH HOH . E 4 HOH A 52 752 150 HOH HOH . E 4 HOH A 53 753 48 HOH HOH . E 4 HOH A 54 754 151 HOH HOH . E 4 HOH A 55 755 79 HOH HOH . E 4 HOH A 56 756 142 HOH HOH . E 4 HOH A 57 757 94 HOH HOH . E 4 HOH A 58 758 93 HOH HOH . E 4 HOH A 59 759 178 HOH HOH . E 4 HOH A 60 760 155 HOH HOH . E 4 HOH A 61 761 143 HOH HOH . E 4 HOH A 62 762 152 HOH HOH . E 4 HOH A 63 763 135 HOH HOH . E 4 HOH A 64 764 148 HOH HOH . E 4 HOH A 65 765 162 HOH HOH . E 4 HOH A 66 766 169 HOH HOH . E 4 HOH A 67 767 165 HOH HOH . E 4 HOH A 68 768 134 HOH HOH . E 4 HOH A 69 769 136 HOH HOH . E 4 HOH A 70 770 153 HOH HOH . E 4 HOH A 71 771 163 HOH HOH . E 4 HOH A 72 772 167 HOH HOH . E 4 HOH A 73 773 160 HOH HOH . E 4 HOH A 74 774 101 HOH HOH . E 4 HOH A 75 775 116 HOH HOH . E 4 HOH A 76 776 161 HOH HOH . E 4 HOH A 77 777 154 HOH HOH . F 4 HOH B 1 701 84 HOH HOH . F 4 HOH B 2 702 18 HOH HOH . F 4 HOH B 3 703 17 HOH HOH . F 4 HOH B 4 704 82 HOH HOH . F 4 HOH B 5 705 85 HOH HOH . F 4 HOH B 6 706 15 HOH HOH . F 4 HOH B 7 707 22 HOH HOH . F 4 HOH B 8 708 10 HOH HOH . F 4 HOH B 9 709 174 HOH HOH . F 4 HOH B 10 710 39 HOH HOH . F 4 HOH B 11 711 81 HOH HOH . F 4 HOH B 12 712 66 HOH HOH . F 4 HOH B 13 713 16 HOH HOH . F 4 HOH B 14 714 74 HOH HOH . F 4 HOH B 15 715 29 HOH HOH . F 4 HOH B 16 716 13 HOH HOH . F 4 HOH B 17 717 2 HOH HOH . F 4 HOH B 18 718 8 HOH HOH . F 4 HOH B 19 719 3 HOH HOH . F 4 HOH B 20 720 112 HOH HOH . F 4 HOH B 21 721 63 HOH HOH . F 4 HOH B 22 722 33 HOH HOH . F 4 HOH B 23 723 42 HOH HOH . F 4 HOH B 24 724 97 HOH HOH . F 4 HOH B 25 725 78 HOH HOH . F 4 HOH B 26 726 128 HOH HOH . F 4 HOH B 27 727 19 HOH HOH . F 4 HOH B 28 728 14 HOH HOH . F 4 HOH B 29 729 86 HOH HOH . F 4 HOH B 30 730 53 HOH HOH . F 4 HOH B 31 731 38 HOH HOH . F 4 HOH B 32 732 119 HOH HOH . F 4 HOH B 33 733 45 HOH HOH . F 4 HOH B 34 734 68 HOH HOH . F 4 HOH B 35 735 12 HOH HOH . F 4 HOH B 36 736 179 HOH HOH . F 4 HOH B 37 737 27 HOH HOH . F 4 HOH B 38 738 92 HOH HOH . F 4 HOH B 39 739 43 HOH HOH . F 4 HOH B 40 740 57 HOH HOH . F 4 HOH B 41 741 88 HOH HOH . F 4 HOH B 42 742 69 HOH HOH . F 4 HOH B 43 743 47 HOH HOH . F 4 HOH B 44 744 44 HOH HOH . F 4 HOH B 45 745 77 HOH HOH . F 4 HOH B 46 746 127 HOH HOH . F 4 HOH B 47 747 175 HOH HOH . F 4 HOH B 48 748 98 HOH HOH . F 4 HOH B 49 749 146 HOH HOH . F 4 HOH B 50 750 164 HOH HOH . F 4 HOH B 51 751 107 HOH HOH . F 4 HOH B 52 752 76 HOH HOH . F 4 HOH B 53 753 173 HOH HOH . F 4 HOH B 54 754 159 HOH HOH . F 4 HOH B 55 755 83 HOH HOH . F 4 HOH B 56 756 100 HOH HOH . F 4 HOH B 57 757 129 HOH HOH . F 4 HOH B 58 758 132 HOH HOH . F 4 HOH B 59 759 64 HOH HOH . F 4 HOH B 60 760 49 HOH HOH . F 4 HOH B 61 761 105 HOH HOH . F 4 HOH B 62 762 90 HOH HOH . F 4 HOH B 63 763 121 HOH HOH . F 4 HOH B 64 764 180 HOH HOH . F 4 HOH B 65 765 149 HOH HOH . F 4 HOH B 66 766 80 HOH HOH . F 4 HOH B 67 767 113 HOH HOH . F 4 HOH B 68 768 25 HOH HOH . F 4 HOH B 69 769 104 HOH HOH . F 4 HOH B 70 770 62 HOH HOH . F 4 HOH B 71 771 133 HOH HOH . F 4 HOH B 72 772 176 HOH HOH . F 4 HOH B 73 773 125 HOH HOH . F 4 HOH B 74 774 170 HOH HOH . F 4 HOH B 75 775 108 HOH HOH . F 4 HOH B 76 776 123 HOH HOH . F 4 HOH B 77 777 126 HOH HOH . F 4 HOH B 78 778 122 HOH HOH . F 4 HOH B 79 779 61 HOH HOH . F 4 HOH B 80 780 60 HOH HOH . F 4 HOH B 81 781 120 HOH HOH . F 4 HOH B 82 782 140 HOH HOH . F 4 HOH B 83 783 139 HOH HOH . F 4 HOH B 84 784 166 HOH HOH . F 4 HOH B 85 785 144 HOH HOH . F 4 HOH B 86 786 168 HOH HOH . F 4 HOH B 87 787 58 HOH HOH . F 4 HOH B 88 788 138 HOH HOH . F 4 HOH B 89 789 137 HOH HOH . F 4 HOH B 90 790 124 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 GOL . . . D 3 -14.701 28.658 -5.569 1 42.85 ? C1 GOL 601 B 1 HETATM 2 O O1 GOL . . . D 3 -14.924 27.507 -4.784 1 47.52 ? O1 GOL 601 B 1 HETATM 3 C C2 GOL . . . D 3 -16.095 29.155 -6.031 1 46.55 ? C2 GOL 601 B 1 HETATM 4 O O2 GOL . . . D 3 -16.834 29.682 -4.981 1 50.25 ? O2 GOL 601 B 1 HETATM 5 C C3 GOL . . . D 3 -15.827 30.207 -7.13 1 49.99 ? C3 GOL 601 B 1 HETATM 6 O O3 GOL . . . D 3 -17.034 30.91 -7.299 1 52.41 ? O3 GOL 601 B 1 # _model_server_stats.io_time_ms 58 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 304 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 6 #