data_8BSA # _model_server_result.job_id FLq6l69L2uxCbBKYd1jMHw _model_server_result.datetime_utc '2024-10-13 19:21:29' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8bsa # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":301}' # _entry.id 8BSA # _exptl.entry_id 8BSA _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 175.209 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description D-ARGININE _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 75.81 _cell.angle_beta 84.49 _cell.angle_gamma 74.74 _cell.entry_id 8BSA _cell.length_a 38.499 _cell.length_b 44.557 _cell.length_c 55.337 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8BSA _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall 'P 1' _symmetry.space_group_name_H-M 'P 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,E 1 1 B,D,F 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N # _chem_comp.formula 'C6 H15 N4 O2 1' _chem_comp.formula_weight 175.209 _chem_comp.id DAR _chem_comp.mon_nstd_flag . _chem_comp.name D-ARGININE _chem_comp.type 'd-peptide linking' _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N CA DAR sing 70 n n N H DAR sing 71 n n N H2 DAR sing 72 n n CA CB DAR sing 73 n n CA C DAR sing 74 n n CA HA DAR sing 75 n n CB CG DAR sing 76 n n CB HB2 DAR sing 77 n n CB HB3 DAR sing 78 n n CG CD DAR sing 79 n n CG HG2 DAR sing 80 n n CG HG3 DAR sing 81 n n CD NE DAR sing 82 n n CD HD2 DAR sing 83 n n CD HD3 DAR sing 84 n n NE CZ DAR sing 85 n n NE HE DAR sing 86 n n CZ NH1 DAR sing 87 n n CZ NH2 DAR doub 88 n n NH1 HH11 DAR sing 89 n n NH1 HH12 DAR sing 90 n n NH2 HH21 DAR sing 91 n n NH2 HH22 DAR sing 92 n n C O DAR doub 93 n n C OXT DAR sing 94 n n OXT HXT DAR sing 95 n n # _atom_sites.entry_id 8BSA _atom_sites.fract_transf_matrix[1][1] 0.025975 _atom_sites.fract_transf_matrix[1][2] -0.007086 _atom_sites.fract_transf_matrix[1][3] -0.000907 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.023263 _atom_sites.fract_transf_matrix[2][3] -0.005472 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.01865 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 DAR A 1 301 232 DAR DAR . D 2 DAR B 1 301 232 DAR DAR . E 3 HOH A 1 401 40 HOH HOH . E 3 HOH A 2 402 79 HOH HOH . E 3 HOH A 3 403 36 HOH HOH . E 3 HOH A 4 404 104 HOH HOH . E 3 HOH A 5 405 139 HOH HOH . E 3 HOH A 6 406 52 HOH HOH . E 3 HOH A 7 407 155 HOH HOH . E 3 HOH A 8 408 45 HOH HOH . E 3 HOH A 9 409 10 HOH HOH . E 3 HOH A 10 410 21 HOH HOH . E 3 HOH A 11 411 1 HOH HOH . E 3 HOH A 12 412 132 HOH HOH . E 3 HOH A 13 413 149 HOH HOH . E 3 HOH A 14 414 18 HOH HOH . E 3 HOH A 15 415 19 HOH HOH . E 3 HOH A 16 416 94 HOH HOH . E 3 HOH A 17 417 87 HOH HOH . E 3 HOH A 18 418 56 HOH HOH . E 3 HOH A 19 419 44 HOH HOH . E 3 HOH A 20 420 59 HOH HOH . E 3 HOH A 21 421 47 HOH HOH . E 3 HOH A 22 422 43 HOH HOH . E 3 HOH A 23 423 143 HOH HOH . E 3 HOH A 24 424 22 HOH HOH . E 3 HOH A 25 425 123 HOH HOH . E 3 HOH A 26 426 113 HOH HOH . E 3 HOH A 27 427 26 HOH HOH . E 3 HOH A 28 428 41 HOH HOH . E 3 HOH A 29 429 29 HOH HOH . E 3 HOH A 30 430 6 HOH HOH . E 3 HOH A 31 431 34 HOH HOH . E 3 HOH A 32 432 27 HOH HOH . E 3 HOH A 33 433 16 HOH HOH . E 3 HOH A 34 434 3 HOH HOH . E 3 HOH A 35 435 102 HOH HOH . E 3 HOH A 36 436 61 HOH HOH . E 3 HOH A 37 437 65 HOH HOH . E 3 HOH A 38 438 5 HOH HOH . E 3 HOH A 39 439 53 HOH HOH . E 3 HOH A 40 440 50 HOH HOH . E 3 HOH A 41 441 88 HOH HOH . E 3 HOH A 42 442 121 HOH HOH . E 3 HOH A 43 443 37 HOH HOH . E 3 HOH A 44 444 15 HOH HOH . E 3 HOH A 45 445 142 HOH HOH . E 3 HOH A 46 446 73 HOH HOH . E 3 HOH A 47 447 159 HOH HOH . E 3 HOH A 48 448 135 HOH HOH . E 3 HOH A 49 449 83 HOH HOH . E 3 HOH A 50 450 108 HOH HOH . E 3 HOH A 51 451 4 HOH HOH . E 3 HOH A 52 452 154 HOH HOH . E 3 HOH A 53 453 137 HOH HOH . E 3 HOH A 54 454 80 HOH HOH . E 3 HOH A 55 455 120 HOH HOH . E 3 HOH A 56 456 33 HOH HOH . E 3 HOH A 57 457 12 HOH HOH . E 3 HOH A 58 458 130 HOH HOH . E 3 HOH A 59 459 2 HOH HOH . E 3 HOH A 60 460 107 HOH HOH . E 3 HOH A 61 461 72 HOH HOH . E 3 HOH A 62 462 66 HOH HOH . E 3 HOH A 63 463 70 HOH HOH . E 3 HOH A 64 464 119 HOH HOH . E 3 HOH A 65 465 131 HOH HOH . E 3 HOH A 66 466 106 HOH HOH . E 3 HOH A 67 467 92 HOH HOH . E 3 HOH A 68 468 95 HOH HOH . E 3 HOH A 69 469 133 HOH HOH . E 3 HOH A 70 470 146 HOH HOH . E 3 HOH A 71 471 153 HOH HOH . E 3 HOH A 72 472 150 HOH HOH . E 3 HOH A 73 473 110 HOH HOH . E 3 HOH A 74 474 31 HOH HOH . E 3 HOH A 75 475 141 HOH HOH . E 3 HOH A 76 476 145 HOH HOH . F 3 HOH B 1 401 101 HOH HOH . F 3 HOH B 2 402 147 HOH HOH . F 3 HOH B 3 403 14 HOH HOH . F 3 HOH B 4 404 158 HOH HOH . F 3 HOH B 5 405 62 HOH HOH . F 3 HOH B 6 406 54 HOH HOH . F 3 HOH B 7 407 74 HOH HOH . F 3 HOH B 8 408 157 HOH HOH . F 3 HOH B 9 409 76 HOH HOH . F 3 HOH B 10 410 57 HOH HOH . F 3 HOH B 11 411 122 HOH HOH . F 3 HOH B 12 412 128 HOH HOH . F 3 HOH B 13 413 35 HOH HOH . F 3 HOH B 14 414 111 HOH HOH . F 3 HOH B 15 415 118 HOH HOH . F 3 HOH B 16 416 23 HOH HOH . F 3 HOH B 17 417 78 HOH HOH . F 3 HOH B 18 418 68 HOH HOH . F 3 HOH B 19 419 48 HOH HOH . F 3 HOH B 20 420 60 HOH HOH . F 3 HOH B 21 421 67 HOH HOH . F 3 HOH B 22 422 100 HOH HOH . F 3 HOH B 23 423 81 HOH HOH . F 3 HOH B 24 424 71 HOH HOH . F 3 HOH B 25 425 148 HOH HOH . F 3 HOH B 26 426 126 HOH HOH . F 3 HOH B 27 427 25 HOH HOH . F 3 HOH B 28 428 38 HOH HOH . F 3 HOH B 29 429 114 HOH HOH . F 3 HOH B 30 430 7 HOH HOH . F 3 HOH B 31 431 42 HOH HOH . F 3 HOH B 32 432 9 HOH HOH . F 3 HOH B 33 433 11 HOH HOH . F 3 HOH B 34 434 8 HOH HOH . F 3 HOH B 35 435 84 HOH HOH . F 3 HOH B 36 436 46 HOH HOH . F 3 HOH B 37 437 32 HOH HOH . F 3 HOH B 38 438 98 HOH HOH . F 3 HOH B 39 439 39 HOH HOH . F 3 HOH B 40 440 17 HOH HOH . F 3 HOH B 41 441 129 HOH HOH . F 3 HOH B 42 442 127 HOH HOH . F 3 HOH B 43 443 96 HOH HOH . F 3 HOH B 44 444 69 HOH HOH . F 3 HOH B 45 445 24 HOH HOH . F 3 HOH B 46 446 89 HOH HOH . F 3 HOH B 47 447 85 HOH HOH . F 3 HOH B 48 448 55 HOH HOH . F 3 HOH B 49 449 13 HOH HOH . F 3 HOH B 50 450 99 HOH HOH . F 3 HOH B 51 451 77 HOH HOH . F 3 HOH B 52 452 82 HOH HOH . F 3 HOH B 53 453 30 HOH HOH . F 3 HOH B 54 454 97 HOH HOH . F 3 HOH B 55 455 136 HOH HOH . F 3 HOH B 56 456 86 HOH HOH . F 3 HOH B 57 457 63 HOH HOH . F 3 HOH B 58 458 64 HOH HOH . F 3 HOH B 59 459 75 HOH HOH . F 3 HOH B 60 460 125 HOH HOH . F 3 HOH B 61 461 144 HOH HOH . F 3 HOH B 62 462 20 HOH HOH . F 3 HOH B 63 463 49 HOH HOH . F 3 HOH B 64 464 90 HOH HOH . F 3 HOH B 65 465 134 HOH HOH . F 3 HOH B 66 466 51 HOH HOH . F 3 HOH B 67 467 28 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N DAR . . . D 2 -8.232 18.295 13.018 1 39.53 ? N DAR 301 B 1 HETATM 2 C CA DAR . . . D 2 -8.088 16.926 12.553 1 47.96 ? CA DAR 301 B 1 HETATM 3 C CB DAR . . . D 2 -7.025 16.191 13.366 1 42.81 ? CB DAR 301 B 1 HETATM 4 C CG DAR . . . D 2 -7.212 16.318 14.832 1 44.57 ? CG DAR 301 B 1 HETATM 5 C CD DAR . . . D 2 -8.509 15.66 15.238 1 49.06 ? CD DAR 301 B 1 HETATM 6 N NE DAR . . . D 2 -8.42 15.155 16.598 1 38.77 ? NE DAR 301 B 1 HETATM 7 C CZ DAR . . . D 2 -8.721 15.862 17.678 1 45.42 ? CZ DAR 301 B 1 HETATM 8 N NH1 DAR . . . D 2 -8.529 15.325 18.878 1 43.87 ? NH1 DAR 301 B 1 HETATM 9 N NH2 DAR . . . D 2 -9.211 17.087 17.589 1 45.45 ? NH2 DAR 301 B 1 HETATM 10 C C DAR . . . D 2 -7.686 16.844 11.097 1 51.49 ? C DAR 301 B 1 HETATM 11 O O DAR . . . D 2 -7.741 17.828 10.35 1 51.34 ? O DAR 301 B 1 HETATM 12 O OXT DAR . . . D 2 -7.286 15.77 10.65 1 50.21 ? OXT DAR 301 B 1 HETATM 13 H H2 DAR . . . D 2 -9.029 18.548 13.491 1 47.43 ? H2 DAR 301 B 1 HETATM 14 H H DAR . . . D 2 -7.492 18.68 13.219 1 47.43 ? H DAR 301 B 1 HETATM 15 H HA DAR . . . D 2 -8.952 16.499 12.663 1 57.56 ? HA DAR 301 B 1 HETATM 16 H HB2 DAR . . . D 2 -6.154 16.555 13.144 1 51.38 ? HB2 DAR 301 B 1 HETATM 17 H HB3 DAR . . . D 2 -7.057 15.247 13.142 1 51.38 ? HB3 DAR 301 B 1 HETATM 18 H HG2 DAR . . . D 2 -7.247 17.256 15.078 1 53.49 ? HG2 DAR 301 B 1 HETATM 19 H HG3 DAR . . . D 2 -6.481 15.881 15.295 1 53.49 ? HG3 DAR 301 B 1 HETATM 20 H HD2 DAR . . . D 2 -8.696 14.916 14.643 1 58.87 ? HD2 DAR 301 B 1 HETATM 21 H HD3 DAR . . . D 2 -9.23 16.308 15.195 1 58.87 ? HD3 DAR 301 B 1 HETATM 22 H HE DAR . . . D 2 -8.155 14.344 16.71 1 46.52 ? HE DAR 301 B 1 HETATM 23 H HH11 DAR . . . D 2 -8.212 14.528 18.946 1 52.65 ? HH11 DAR 301 B 1 HETATM 24 H HH12 DAR . . . D 2 -8.72 15.774 19.586 1 52.65 ? HH12 DAR 301 B 1 HETATM 25 H HH21 DAR . . . D 2 -9.342 17.443 16.817 1 54.54 ? HH21 DAR 301 B 1 HETATM 26 H HH22 DAR . . . D 2 -9.4 17.528 18.303 1 54.54 ? HH22 DAR 301 B 1 # _model_server_stats.io_time_ms 18 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 271 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 26 #