data_8BSH
#
_model_server_result.job_id            jx9xKMx5lc1llqhdR6lwKA 
_model_server_result.datetime_utc      '2024-10-20 19:39:35' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          8bsh 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"E","auth_seq_id":202}' 
#
_entry.id    8BSH 
#
_exptl.entry_id    8BSH 
_exptl.method      'ELECTRON MICROSCOPY' 
#
_entity.details                     ? 
_entity.formula_weight              522.196 
_entity.id                          5 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            8BSH 
_cell.length_a            1 
_cell.length_b            1 
_cell.length_c            1 
_cell.Z_PDB               ? 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 8BSH 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        1 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    trimeric 
_pdbx_struct_assembly.oligomeric_count      3 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    ? 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      5 
_struct_asym.id                             E 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 C OG1 THR 37 B THR 37 1_555 D MG MG . B MG 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.683 ? 
metalc ? metalc2 C OG1 THR 54 B THR 54 1_555 D MG MG . B MG 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.915 ? 
metalc ? metalc3 D MG MG . B MG 201 1_555 E O2G GNP . B GNP 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.913 ? 
metalc ? metalc4 D MG MG . B MG 201 1_555 E O2B GNP . B GNP 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.894 ? 
#
_chem_comp.formula           'C10 H17 N6 O13 P3' 
_chem_comp.formula_weight    522.196 
_chem_comp.id                GNP 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
PG O1G GNP doub 129 n n 
PG O2G GNP sing 130 n n 
PG O3G GNP sing 131 n n 
PG N3B GNP sing 132 n n 
O2G HOG2 GNP sing 133 n n 
O3G HOG3 GNP sing 134 n n 
N3B PB GNP sing 135 n n 
N3B HNB3 GNP sing 136 n n 
PB O1B GNP doub 137 n n 
PB O2B GNP sing 138 n n 
PB O3A GNP sing 139 n n 
O2B HOB2 GNP sing 140 n n 
O3A PA GNP sing 141 n n 
PA O1A GNP doub 142 n n 
PA O2A GNP sing 143 n n 
PA O5' GNP sing 144 n n 
O2A HOA2 GNP sing 145 n n 
O5' C5' GNP sing 146 n n 
C5' C4' GNP sing 147 n n 
C5' "H5'2" GNP sing 148 n n 
C5' "H5'1" GNP sing 149 n n 
C4' O4' GNP sing 150 n n 
C4' C3' GNP sing 151 n n 
C4' H4' GNP sing 152 n n 
O4' C1' GNP sing 153 n n 
C3' O3' GNP sing 154 n n 
C3' C2' GNP sing 155 n n 
C3' H3' GNP sing 156 n n 
O3' HO3' GNP sing 157 n n 
C2' O2' GNP sing 158 n n 
C2' C1' GNP sing 159 n n 
C2' H2' GNP sing 160 n n 
O2' HO2' GNP sing 161 n n 
C1' N9 GNP sing 162 n n 
C1' H1' GNP sing 163 n n 
N9 C8 GNP sing 164 n y 
N9 C4 GNP sing 165 n y 
C8 N7 GNP doub 166 n y 
C8 H8 GNP sing 167 n n 
N7 C5 GNP sing 168 n y 
C5 C6 GNP sing 169 n y 
C5 C4 GNP doub 170 n y 
C6 O6 GNP doub 171 n n 
C6 N1 GNP sing 172 n y 
N1 C2 GNP sing 173 n y 
N1 HN1 GNP sing 174 n n 
C2 N2 GNP sing 175 n n 
C2 N3 GNP doub 176 n y 
N2 HN21 GNP sing 177 n n 
N2 HN22 GNP sing 178 n n 
N3 C4 GNP sing 179 n y 
#
_atom_sites.entry_id                     8BSH 
_atom_sites.fract_transf_matrix[1][1]    1 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    1 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    1 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
D 4 MG B 1 201 210 MG MG . 
E 5 GNP B 1 202 5200 GNP GNP . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 P PG GNP . . . E 5 132.503 158.61 130.58 1 85.85 ? PG GNP 202 B 1 
HETATM 2 O O1G GNP . . . E 5 131.464 158.055 131.507 1 85.85 ? O1G GNP 202 B 1 
HETATM 3 O O2G GNP . . . E 5 132.378 157.947 129.211 1 85.85 ? O2G GNP 202 B 1 
HETATM 4 O O3G GNP . . . E 5 133.918 158.353 131.15 1 85.85 ? O3G GNP 202 B 1 
HETATM 5 N N3B GNP . . . E 5 132.288 160.289 130.429 1 85.85 ? N3B GNP 202 B 1 
HETATM 6 P PB GNP . . . E 5 132.153 160.937 128.94 1 85.85 ? PB GNP 202 B 1 
HETATM 7 O O1B GNP . . . E 5 133.511 160.966 128.302 1 85.85 ? O1B GNP 202 B 1 
HETATM 8 O O2B GNP . . . E 5 131.222 160.115 128.103 1 85.85 ? O2B GNP 202 B 1 
HETATM 9 O O3A GNP . . . E 5 131.562 162.455 129.074 1 85.85 ? O3A GNP 202 B 1 
HETATM 10 P PA GNP . . . E 5 131.37 163.387 127.812 1 85.85 ? PA GNP 202 B 1 
HETATM 11 O O1A GNP . . . E 5 132.584 164.308 127.754 1 85.85 ? O1A GNP 202 B 1 
HETATM 12 O O2A GNP . . . E 5 131.113 162.595 126.607 1 85.85 ? O2A GNP 202 B 1 
HETATM 13 O O5' GNP . . . E 5 130.096 164.22 128.184 1 85.85 ? O5' GNP 202 B 1 
HETATM 14 C C5' GNP . . . E 5 130.073 165.655 128.037 1 85.85 ? C5' GNP 202 B 1 
HETATM 15 C C4' GNP . . . E 5 130.603 166.268 129.306 1 85.85 ? C4' GNP 202 B 1 
HETATM 16 O O4' GNP . . . E 5 131.909 166.829 129.056 1 85.85 ? O4' GNP 202 B 1 
HETATM 17 C C3' GNP . . . E 5 129.776 167.416 129.869 1 85.85 ? C3' GNP 202 B 1 
HETATM 18 O O3' GNP . . . E 5 129.953 167.518 131.278 1 85.85 ? O3' GNP 202 B 1 
HETATM 19 C C2' GNP . . . E 5 130.365 168.625 129.145 1 85.85 ? C2' GNP 202 B 1 
HETATM 20 O O2' GNP . . . E 5 130.209 169.81 129.915 1 85.85 ? O2' GNP 202 B 1 
HETATM 21 C C1' GNP . . . E 5 131.846 168.244 129.073 1 85.85 ? C1' GNP 202 B 1 
HETATM 22 N N9 GNP . . . E 5 132.524 168.748 127.87 1 85.85 ? N9 GNP 202 B 1 
HETATM 23 C C8 GNP . . . E 5 132.609 168.138 126.649 1 85.85 ? C8 GNP 202 B 1 
HETATM 24 N N7 GNP . . . E 5 133.289 168.837 125.769 1 85.85 ? N7 GNP 202 B 1 
HETATM 25 C C5 GNP . . . E 5 133.673 169.973 126.459 1 85.85 ? C5 GNP 202 B 1 
HETATM 26 C C6 GNP . . . E 5 134.443 171.122 126.043 1 85.85 ? C6 GNP 202 B 1 
HETATM 27 O O6 GNP . . . E 5 134.929 171.334 124.934 1 85.85 ? O6 GNP 202 B 1 
HETATM 28 N N1 GNP . . . E 5 134.589 172.039 127.061 1 85.85 ? N1 GNP 202 B 1 
HETATM 29 C C2 GNP . . . E 5 134.082 171.901 128.325 1 85.85 ? C2 GNP 202 B 1 
HETATM 30 N N2 GNP . . . E 5 134.327 172.891 129.186 1 85.85 ? N2 GNP 202 B 1 
HETATM 31 N N3 GNP . . . E 5 133.376 170.846 128.723 1 85.85 ? N3 GNP 202 B 1 
HETATM 32 C C4 GNP . . . E 5 133.21 169.931 127.751 1 85.85 ? C4 GNP 202 B 1 
#
_model_server_stats.io_time_ms              122 
_model_server_stats.parse_time_ms           27 
_model_server_stats.create_model_time_ms    26 
_model_server_stats.query_time_ms           320 
_model_server_stats.encode_time_ms          17 
_model_server_stats.element_count           32 
#