data_8BSM # _model_server_result.job_id iT9paFpNY5NJ4jXM-S6n-A _model_server_result.datetime_utc '2024-11-26 05:53:13' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8bsm # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"G","auth_seq_id":606}' # _entry.id 8BSM # _exptl.entry_id 8BSM _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 520.63 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 2-phenyl-~{N}-[5-[[(3~{R})-1-[5-(2-phenylethanoylamino)-1,3,4-thiadiazol-2-yl]pyrrolidin-3-yl]amino]-1,3,4-thiadiazol-2-yl]ethanamide _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 8BSM _cell.length_a 139.928 _cell.length_b 139.928 _cell.length_c 156.093 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8BSM _symmetry.cell_setting ? _symmetry.Int_Tables_number 98 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'I 41 2 2' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,C,D,E,F,G,H 1 1 A,B,C,D,E,F,G,H 1 2 A,B,C,D,E,F,G,H 1 3 A,B,C,D,E,F,G,H 1 4 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 8_555 -y,-x,-z 0 -1 0 -1 0 0 0 0 -1 0 0 0 3 'crystal symmetry operation' 10_555 -x,-y,z -1 0 0 0 -1 0 0 0 1 0 0 0 4 'crystal symmetry operation' 15_555 y,x,-z 0 1 0 1 0 0 0 0 -1 0 0 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id G _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C24 H24 N8 O2 S2' _chem_comp.formula_weight 520.63 _chem_comp.id 5XX _chem_comp.mon_nstd_flag . _chem_comp.name 2-phenyl-~{N}-[5-[[(3~{R})-1-[5-(2-phenylethanoylamino)-1,3,4-thiadiazol-2-yl]pyrrolidin-3-yl]amino]-1,3,4-thiadiazol-2-yl]ethanamide _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C13 C12 5XX sing 1 n n C13 C14 5XX sing 2 n n N09 C10 5XX doub 3 n y N09 N08 5XX sing 4 n y N11 C12 5XX sing 5 n n N11 C10 5XX sing 6 n n C12 O20 5XX doub 7 n n C14 C15 5XX doub 8 n y C14 C19 5XX sing 9 n y C10 S21 5XX sing 10 n y N08 C07 5XX doub 11 n y C15 C16 5XX sing 12 n y C19 C18 5XX doub 13 n y C16 C17 5XX doub 14 n y C18 C17 5XX sing 15 n y C33 C32 5XX doub 16 n y C33 C34 5XX sing 17 n y C32 C31 5XX sing 18 n y C07 S21 5XX sing 19 n y C07 N06 5XX sing 20 n n C04 C05 5XX sing 21 n n C04 N03 5XX sing 22 n n C05 N06 5XX sing 23 n n C05 C01 5XX sing 24 n n C34 C29 5XX doub 25 n y C31 C30 5XX doub 26 n y S36 C22 5XX sing 27 n y S36 C25 5XX sing 28 n y C01 C02 5XX sing 29 n n N03 C22 5XX sing 30 n n N03 C02 5XX sing 31 n n C29 C30 5XX sing 32 n y C29 C28 5XX sing 33 n n C22 N23 5XX doub 34 n y N26 C25 5XX sing 35 n n N26 C27 5XX sing 36 n n C25 N24 5XX doub 37 n y O35 C27 5XX doub 38 n n C27 C28 5XX sing 39 n n N23 N24 5XX sing 40 n y C13 H1 5XX sing 41 n n C13 H2 5XX sing 42 n n C15 H3 5XX sing 43 n n C17 H4 5XX sing 44 n n C28 H5 5XX sing 45 n n C28 H6 5XX sing 46 n n C01 H7 5XX sing 47 n n C01 H8 5XX sing 48 n n C02 H9 5XX sing 49 n n C02 H10 5XX sing 50 n n C04 H11 5XX sing 51 n n C04 H12 5XX sing 52 n n C05 H13 5XX sing 53 n n N06 H14 5XX sing 54 n n N11 H15 5XX sing 55 n n C16 H16 5XX sing 56 n n C18 H17 5XX sing 57 n n C19 H18 5XX sing 58 n n N26 H19 5XX sing 59 n n C30 H20 5XX sing 60 n n C31 H21 5XX sing 61 n n C32 H22 5XX sing 62 n n C33 H23 5XX sing 63 n n C34 H24 5XX sing 64 n n # _atom_sites.entry_id 8BSM _atom_sites.fract_transf_matrix[1][1] 0.007147 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.007147 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006406 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 SO4 A 1 601 1 SO4 SO4 . C 2 SO4 A 1 602 2 SO4 SO4 . D 2 SO4 A 1 603 3 SO4 SO4 . E 2 SO4 A 1 604 4 SO4 SO4 . F 2 SO4 A 1 605 6 SO4 SO4 . G 3 5XX A 1 606 1 5XX INH . H 4 HOH A 1 701 165 HOH HOH . H 4 HOH A 2 702 4 HOH HOH . H 4 HOH A 3 703 55 HOH HOH . H 4 HOH A 4 704 84 HOH HOH . H 4 HOH A 5 705 8 HOH HOH . H 4 HOH A 6 706 115 HOH HOH . H 4 HOH A 7 707 24 HOH HOH . H 4 HOH A 8 708 5 HOH HOH . H 4 HOH A 9 709 100 HOH HOH . H 4 HOH A 10 710 42 HOH HOH . H 4 HOH A 11 711 46 HOH HOH . H 4 HOH A 12 712 121 HOH HOH . H 4 HOH A 13 713 15 HOH HOH . H 4 HOH A 14 714 92 HOH HOH . H 4 HOH A 15 715 38 HOH HOH . H 4 HOH A 16 716 141 HOH HOH . H 4 HOH A 17 717 72 HOH HOH . H 4 HOH A 18 718 99 HOH HOH . H 4 HOH A 19 719 57 HOH HOH . H 4 HOH A 20 720 49 HOH HOH . H 4 HOH A 21 721 27 HOH HOH . H 4 HOH A 22 722 7 HOH HOH . H 4 HOH A 23 723 87 HOH HOH . H 4 HOH A 24 724 78 HOH HOH . H 4 HOH A 25 725 94 HOH HOH . H 4 HOH A 26 726 133 HOH HOH . H 4 HOH A 27 727 51 HOH HOH . H 4 HOH A 28 728 14 HOH HOH . H 4 HOH A 29 729 86 HOH HOH . H 4 HOH A 30 730 25 HOH HOH . H 4 HOH A 31 731 85 HOH HOH . H 4 HOH A 32 732 139 HOH HOH . H 4 HOH A 33 733 17 HOH HOH . H 4 HOH A 34 734 59 HOH HOH . H 4 HOH A 35 735 30 HOH HOH . H 4 HOH A 36 736 102 HOH HOH . H 4 HOH A 37 737 93 HOH HOH . H 4 HOH A 38 738 31 HOH HOH . H 4 HOH A 39 739 21 HOH HOH . H 4 HOH A 40 740 37 HOH HOH . H 4 HOH A 41 741 89 HOH HOH . H 4 HOH A 42 742 13 HOH HOH . H 4 HOH A 43 743 104 HOH HOH . H 4 HOH A 44 744 79 HOH HOH . H 4 HOH A 45 745 44 HOH HOH . H 4 HOH A 46 746 74 HOH HOH . H 4 HOH A 47 747 10 HOH HOH . H 4 HOH A 48 748 29 HOH HOH . H 4 HOH A 49 749 58 HOH HOH . H 4 HOH A 50 750 95 HOH HOH . H 4 HOH A 51 751 76 HOH HOH . H 4 HOH A 52 752 97 HOH HOH . H 4 HOH A 53 753 53 HOH HOH . H 4 HOH A 54 754 70 HOH HOH . H 4 HOH A 55 755 65 HOH HOH . H 4 HOH A 56 756 23 HOH HOH . H 4 HOH A 57 757 111 HOH HOH . H 4 HOH A 58 758 45 HOH HOH . H 4 HOH A 59 759 60 HOH HOH . H 4 HOH A 60 760 166 HOH HOH . H 4 HOH A 61 761 36 HOH HOH . H 4 HOH A 62 762 33 HOH HOH . H 4 HOH A 63 763 50 HOH HOH . H 4 HOH A 64 764 105 HOH HOH . H 4 HOH A 65 765 35 HOH HOH . H 4 HOH A 66 766 16 HOH HOH . H 4 HOH A 67 767 39 HOH HOH . H 4 HOH A 68 768 119 HOH HOH . H 4 HOH A 69 769 22 HOH HOH . H 4 HOH A 70 770 19 HOH HOH . H 4 HOH A 71 771 110 HOH HOH . H 4 HOH A 72 772 28 HOH HOH . H 4 HOH A 73 773 41 HOH HOH . H 4 HOH A 74 774 1 HOH HOH . H 4 HOH A 75 775 122 HOH HOH . H 4 HOH A 76 776 163 HOH HOH . H 4 HOH A 77 777 32 HOH HOH . H 4 HOH A 78 778 40 HOH HOH . H 4 HOH A 79 779 134 HOH HOH . H 4 HOH A 80 780 143 HOH HOH . H 4 HOH A 81 781 118 HOH HOH . H 4 HOH A 82 782 66 HOH HOH . H 4 HOH A 83 783 164 HOH HOH . H 4 HOH A 84 784 162 HOH HOH . H 4 HOH A 85 785 56 HOH HOH . H 4 HOH A 86 786 146 HOH HOH . H 4 HOH A 87 787 167 HOH HOH . H 4 HOH A 88 788 75 HOH HOH . H 4 HOH A 89 789 126 HOH HOH . H 4 HOH A 90 790 48 HOH HOH . H 4 HOH A 91 791 107 HOH HOH . H 4 HOH A 92 792 103 HOH HOH . H 4 HOH A 93 793 120 HOH HOH . H 4 HOH A 94 794 101 HOH HOH . H 4 HOH A 95 795 148 HOH HOH . H 4 HOH A 96 796 109 HOH HOH . H 4 HOH A 97 797 90 HOH HOH . H 4 HOH A 98 798 132 HOH HOH . H 4 HOH A 99 799 52 HOH HOH . H 4 HOH A 100 800 71 HOH HOH . H 4 HOH A 101 801 108 HOH HOH . H 4 HOH A 102 802 18 HOH HOH . H 4 HOH A 103 803 117 HOH HOH . H 4 HOH A 104 804 112 HOH HOH . H 4 HOH A 105 805 131 HOH HOH . H 4 HOH A 106 806 114 HOH HOH . H 4 HOH A 107 807 96 HOH HOH . H 4 HOH A 108 808 54 HOH HOH . H 4 HOH A 109 809 157 HOH HOH . H 4 HOH A 110 810 123 HOH HOH . H 4 HOH A 111 811 125 HOH HOH . H 4 HOH A 112 812 106 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C10 5XX . . . G 3 -9.084 3.278 2.212 0.5 103.52 ? C10 5XX 606 A 1 HETATM 2 C C13 5XX . . . G 3 -8.929 -0.441 2.628 0.5 103.63 ? C13 5XX 606 A 1 HETATM 3 C C15 5XX . . . G 3 -8.482 -2.659 1.52 0.5 103.67 ? C15 5XX 606 A 1 HETATM 4 C C17 5XX . . . G 3 -9.773 -3.428 -0.342 0.5 103.64 ? C17 5XX 606 A 1 HETATM 5 C C22 5XX . . . G 3 -5.413 8.936 -1.296 0.5 103.2 ? C22 5XX 606 A 1 HETATM 6 C C28 5XX . . . G 3 0.445 8.337 -2.377 0.5 103.51 ? C28 5XX 606 A 1 HETATM 7 C C01 5XX . . . G 3 -8.74 8.847 0.223 0.5 102.96 ? C01 5XX 606 A 1 HETATM 8 C C02 5XX . . . G 3 -7.888 9.145 -1.003 0.5 102.96 ? C02 5XX 606 A 1 HETATM 9 N N03 5XX . . . G 3 -6.54 8.718 -0.602 0.5 103.04 ? N03 5XX 606 A 1 HETATM 10 C C04 5XX . . . G 3 -6.539 7.975 0.653 0.5 103 ? C04 5XX 606 A 1 HETATM 11 C C05 5XX . . . G 3 -8.052 7.675 0.883 0.5 103.02 ? C05 5XX 606 A 1 HETATM 12 N N06 5XX . . . G 3 -8.467 6.387 0.334 0.5 103.16 ? N06 5XX 606 A 1 HETATM 13 C C07 5XX . . . G 3 -8.773 5.362 1.131 0.5 103.33 ? C07 5XX 606 A 1 HETATM 14 N N08 5XX . . . G 3 -9.322 5.498 2.306 0.5 103.4 ? N08 5XX 606 A 1 HETATM 15 N N09 5XX . . . G 3 -9.519 4.272 2.934 0.5 103.47 ? N09 5XX 606 A 1 HETATM 16 N N11 5XX . . . G 3 -9.185 1.98 2.668 0.5 103.59 ? N11 5XX 606 A 1 HETATM 17 C C12 5XX . . . G 3 -8.668 0.91 1.994 0.5 103.65 ? C12 5XX 606 A 1 HETATM 18 C C14 5XX . . . G 3 -9.234 -1.498 1.591 0.5 103.66 ? C14 5XX 606 A 1 HETATM 19 C C16 5XX . . . G 3 -8.754 -3.62 0.561 0.5 103.66 ? C16 5XX 606 A 1 HETATM 20 C C18 5XX . . . G 3 -10.524 -2.277 -0.287 0.5 103.62 ? C18 5XX 606 A 1 HETATM 21 C C19 5XX . . . G 3 -10.254 -1.316 0.672 0.5 103.64 ? C19 5XX 606 A 1 HETATM 22 O O20 5XX . . . G 3 -8.037 1.026 0.946 0.5 103.71 ? O20 5XX 606 A 1 HETATM 23 S S21 5XX . . . G 3 -8.408 3.728 0.679 0.5 103.46 ? S21 5XX 606 A 1 HETATM 24 N N23 5XX . . . G 3 -5.391 9.592 -2.431 0.5 103.26 ? N23 5XX 606 A 1 HETATM 25 N N24 5XX . . . G 3 -4.083 9.686 -2.925 0.5 103.34 ? N24 5XX 606 A 1 HETATM 26 C C25 5XX . . . G 3 -3.215 9.091 -2.15 0.5 103.38 ? C25 5XX 606 A 1 HETATM 27 N N26 5XX . . . G 3 -1.878 9.056 -2.488 0.5 103.45 ? N26 5XX 606 A 1 HETATM 28 C C27 5XX . . . G 3 -0.938 8.384 -1.758 0.5 103.51 ? C27 5XX 606 A 1 HETATM 29 C C29 5XX . . . G 3 1.538 8.824 -1.453 0.5 103.56 ? C29 5XX 606 A 1 HETATM 30 C C30 5XX . . . G 3 2.831 8.34 -1.568 0.5 103.56 ? C30 5XX 606 A 1 HETATM 31 C C31 5XX . . . G 3 3.834 8.789 -0.726 0.5 103.56 ? C31 5XX 606 A 1 HETATM 32 C C32 5XX . . . G 3 3.557 9.729 0.24 0.5 103.54 ? C32 5XX 606 A 1 HETATM 33 C C33 5XX . . . G 3 2.279 10.222 0.364 0.5 103.53 ? C33 5XX 606 A 1 HETATM 34 C C34 5XX . . . G 3 1.275 9.774 -0.479 0.5 103.56 ? C34 5XX 606 A 1 HETATM 35 O O35 5XX . . . G 3 -1.193 7.833 -0.689 0.5 103.54 ? O35 5XX 606 A 1 HETATM 36 S S36 5XX . . . G 3 -3.877 8.36 -0.727 0.5 103.31 ? S36 5XX 606 A 1 # _model_server_stats.io_time_ms 14 _model_server_stats.parse_time_ms 13 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 268 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 36 #