data_8BT2 # _model_server_result.job_id T1U1kA_No0IlgZsw2YqJZA _model_server_result.datetime_utc '2024-11-27 06:13:55' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8bt2 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":505}' # _entry.id 8BT2 # _exptl.entry_id 8BT2 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 78.133 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'DIMETHYL SULFOXIDE' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 8BT2 _cell.length_a 60.036 _cell.length_b 71.472 _cell.length_c 78.341 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8BT2 _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id F _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 24 A CYS 101 1_555 A SG CYS 106 A CYS 183 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? disulf ? disulf2 A SG CYS 53 A CYS 130 1_555 A SG CYS 59 A CYS 136 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? disulf ? disulf3 A SG CYS 202 A CYS 279 1_555 A SG CYS 208 A CYS 285 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? disulf ? disulf4 A SG CYS 229 A CYS 306 1_555 A SG CYS 241 A CYS 318 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? disulf ? disulf5 A SG CYS 309 A CYS 386 1_555 A SG CYS 372 A CYS 449 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.027 ? disulf ? disulf6 A SG CYS 336 A CYS 413 1_555 A SG CYS 355 A CYS 432 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.027 ? disulf ? disulf7 A SG CYS 363 A CYS 440 1_555 A SG CYS 368 A CYS 445 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? covale ? covale1 A ND2 ASN 19 A ASN 96 1_555 B C1 NAG . A NAG 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.439 ? # _chem_comp.formula 'C2 H6 O S' _chem_comp.formula_weight 78.133 _chem_comp.id DMS _chem_comp.mon_nstd_flag . _chem_comp.name 'DIMETHYL SULFOXIDE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag S O DMS doub 83 n n S C1 DMS sing 84 n n S C2 DMS sing 85 n n C1 H11 DMS sing 86 n n C1 H12 DMS sing 87 n n C1 H13 DMS sing 88 n n C2 H21 DMS sing 89 n n C2 H22 DMS sing 90 n n C2 H23 DMS sing 91 n n # _atom_sites.entry_id 8BT2 _atom_sites.fract_transf_matrix[1][1] 0.016657 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013991 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.012765 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 NAG A 1 501 501 NAG NAG . C 3 SO4 A 1 502 505 SO4 SO4 . D 3 SO4 A 1 503 508 SO4 SO4 . E 3 SO4 A 1 504 510 SO4 SO4 . F 4 DMS A 1 505 511 DMS DMS . G 5 EDO A 1 506 517 EDO EDO . H 5 EDO A 1 507 521 EDO EDO . I 5 EDO A 1 508 901 EDO EDO . J 5 EDO A 1 509 1001 EDO EDO . K 5 EDO A 1 510 1101 EDO EDO . L 5 EDO A 1 511 1601 EDO EDO . M 6 RG0 A 1 512 1701 RG0 XXX . N 3 SO4 A 1 513 1 SO4 SO4 . O 7 HOH A 1 601 8 HOH HOH . O 7 HOH A 2 602 2 HOH HOH . O 7 HOH A 3 603 648 HOH HOH . O 7 HOH A 4 604 9 HOH HOH . O 7 HOH A 5 605 5 HOH HOH . O 7 HOH A 6 606 607 HOH HOH . O 7 HOH A 7 607 640 HOH HOH . O 7 HOH A 8 608 3 HOH HOH . O 7 HOH A 9 609 691 HOH HOH . O 7 HOH A 10 610 690 HOH HOH . O 7 HOH A 11 611 636 HOH HOH . O 7 HOH A 12 612 663 HOH HOH . O 7 HOH A 13 613 674 HOH HOH . O 7 HOH A 14 614 620 HOH HOH . O 7 HOH A 15 615 11 HOH HOH . O 7 HOH A 16 616 618 HOH HOH . O 7 HOH A 17 617 643 HOH HOH . O 7 HOH A 18 618 638 HOH HOH . O 7 HOH A 19 619 606 HOH HOH . O 7 HOH A 20 620 677 HOH HOH . O 7 HOH A 21 621 682 HOH HOH . O 7 HOH A 22 622 724 HOH HOH . O 7 HOH A 23 623 651 HOH HOH . O 7 HOH A 24 624 652 HOH HOH . O 7 HOH A 25 625 622 HOH HOH . O 7 HOH A 26 626 650 HOH HOH . O 7 HOH A 27 627 637 HOH HOH . O 7 HOH A 28 628 683 HOH HOH . O 7 HOH A 29 629 657 HOH HOH . O 7 HOH A 30 630 666 HOH HOH . O 7 HOH A 31 631 644 HOH HOH . O 7 HOH A 32 632 608 HOH HOH . O 7 HOH A 33 633 631 HOH HOH . O 7 HOH A 34 634 642 HOH HOH . O 7 HOH A 35 635 647 HOH HOH . O 7 HOH A 36 636 626 HOH HOH . O 7 HOH A 37 637 714 HOH HOH . O 7 HOH A 38 638 602 HOH HOH . O 7 HOH A 39 639 632 HOH HOH . O 7 HOH A 40 640 653 HOH HOH . O 7 HOH A 41 641 665 HOH HOH . O 7 HOH A 42 642 634 HOH HOH . O 7 HOH A 43 643 710 HOH HOH . O 7 HOH A 44 644 737 HOH HOH . O 7 HOH A 45 645 694 HOH HOH . O 7 HOH A 46 646 659 HOH HOH . O 7 HOH A 47 647 635 HOH HOH . O 7 HOH A 48 648 676 HOH HOH . O 7 HOH A 49 649 658 HOH HOH . O 7 HOH A 50 650 707 HOH HOH . O 7 HOH A 51 651 709 HOH HOH . O 7 HOH A 52 652 655 HOH HOH . O 7 HOH A 53 653 616 HOH HOH . O 7 HOH A 54 654 629 HOH HOH . O 7 HOH A 55 655 719 HOH HOH . O 7 HOH A 56 656 673 HOH HOH . O 7 HOH A 57 657 687 HOH HOH . O 7 HOH A 58 658 745 HOH HOH . O 7 HOH A 59 659 649 HOH HOH . O 7 HOH A 60 660 697 HOH HOH . O 7 HOH A 61 661 729 HOH HOH . O 7 HOH A 62 662 695 HOH HOH . O 7 HOH A 63 663 700 HOH HOH . O 7 HOH A 64 664 734 HOH HOH . O 7 HOH A 65 665 13 HOH HOH . O 7 HOH A 66 666 720 HOH HOH . O 7 HOH A 67 667 12 HOH HOH . O 7 HOH A 68 668 698 HOH HOH . O 7 HOH A 69 669 680 HOH HOH . O 7 HOH A 70 670 721 HOH HOH . O 7 HOH A 71 671 670 HOH HOH . O 7 HOH A 72 672 703 HOH HOH . O 7 HOH A 73 673 718 HOH HOH . O 7 HOH A 74 674 668 HOH HOH . O 7 HOH A 75 675 715 HOH HOH . O 7 HOH A 76 676 681 HOH HOH . O 7 HOH A 77 677 689 HOH HOH . O 7 HOH A 78 678 727 HOH HOH . O 7 HOH A 79 679 10 HOH HOH . O 7 HOH A 80 680 725 HOH HOH . O 7 HOH A 81 681 716 HOH HOH . O 7 HOH A 82 682 731 HOH HOH . O 7 HOH A 83 683 755 HOH HOH . O 7 HOH A 84 684 722 HOH HOH . O 7 HOH A 85 685 699 HOH HOH . O 7 HOH A 86 686 7 HOH HOH . O 7 HOH A 87 687 753 HOH HOH . O 7 HOH A 88 688 675 HOH HOH . O 7 HOH A 89 689 735 HOH HOH . O 7 HOH A 90 690 693 HOH HOH . O 7 HOH A 91 691 6 HOH HOH . O 7 HOH A 92 692 723 HOH HOH . O 7 HOH A 93 693 732 HOH HOH . O 7 HOH A 94 694 750 HOH HOH . O 7 HOH A 95 695 736 HOH HOH . O 7 HOH A 96 696 688 HOH HOH . O 7 HOH A 97 697 730 HOH HOH . O 7 HOH A 98 698 701 HOH HOH . O 7 HOH A 99 699 621 HOH HOH . O 7 HOH A 100 700 733 HOH HOH . O 7 HOH A 101 701 603 HOH HOH . O 7 HOH A 102 702 747 HOH HOH . O 7 HOH A 103 703 669 HOH HOH . O 7 HOH A 104 704 756 HOH HOH . O 7 HOH A 105 705 739 HOH HOH . O 7 HOH A 106 706 761 HOH HOH . O 7 HOH A 107 707 773 HOH HOH . O 7 HOH A 108 708 772 HOH HOH . O 7 HOH A 109 709 782 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 S S DMS . . . F 4 -15.629 -2.509 -20.519 1 42.44 ? S DMS 505 A 1 HETATM 2 O O DMS . . . F 4 -15.332 -3.736 -19.716 1 28.07 ? O DMS 505 A 1 HETATM 3 C C1 DMS . . . F 4 -14.093 -1.889 -21.258 1 35.63 ? C1 DMS 505 A 1 HETATM 4 C C2 DMS . . . F 4 -16.527 -2.975 -22.024 1 42.85 ? C2 DMS 505 A 1 # _model_server_stats.io_time_ms 13 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 293 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 4 #