data_8BT5
#
_model_server_result.job_id            dCb-GiAJ8JTAPMZ7X6N71g 
_model_server_result.datetime_utc      '2024-11-13 06:38:02' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          8bt5 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"B","auth_seq_id":501}' 
#
_entry.id    8BT5 
#
_exptl.entry_id    8BT5 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              221.208 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            2-acetamido-2-deoxy-beta-D-glucopyranose 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            8BT5 
_cell.length_a            59.993 
_cell.length_b            71.649 
_cell.length_c            78.112 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 8BT5 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      2 
_struct_asym.id                             B 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 24 A CYS 101 1_555 A SG CYS 106 A CYS 183 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? 
disulf ? disulf2 A SG CYS 53 A CYS 130 1_555 A SG CYS 59 A CYS 136 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.036 ? 
disulf ? disulf3 A SG CYS 202 A CYS 279 1_555 A SG CYS 208 A CYS 285 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.042 ? 
disulf ? disulf4 A SG CYS 229 A CYS 306 1_555 A SG CYS 241 A CYS 318 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.063 ? 
disulf ? disulf5 A SG CYS 309 A CYS 386 1_555 A SG CYS 372 A CYS 449 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? 
disulf ? disulf6 A SG CYS 336 A CYS 413 1_555 A SG CYS 355 A CYS 432 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.017 ? 
disulf ? disulf7 A SG CYS 363 A CYS 440 1_555 A SG CYS 368 A CYS 445 1_555 ? ? ? ? A ? ? ? ? ? ? ? 2.025 ? 
disulf ? disulf8 A SG CYS 363 A CYS 440 1_555 A SG CYS 368 A CYS 445 1_555 ? ? ? ? B ? ? ? ? ? ? ? 2.006 ? 
covale ? covale1 A ND2 ASN 19 A ASN 96 1_555 B C1 NAG . A NAG 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.432 ? 
#
_chem_comp.formula           'C8 H15 N O6' 
_chem_comp.formula_weight    221.208 
_chem_comp.id                NAG 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              2-acetamido-2-deoxy-beta-D-glucopyranose 
_chem_comp.type              'd-saccharide, beta linking' 
_chem_comp.pdbx_synonyms     N-acetyl-beta-D-glucosamine;2-acetamido-2-deoxy-beta-D-glucose;2-acetamido-2-deoxy-D-glucose;2-acetamido-2-deoxy-glucose;N-ACETYL-D-GLUCOSAMINE 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 C2 NAG sing 255 n n 
C1 O1 NAG sing 256 n n 
C1 O5 NAG sing 257 n n 
C1 H1 NAG sing 258 n n 
C2 C3 NAG sing 259 n n 
C2 N2 NAG sing 260 n n 
C2 H2 NAG sing 261 n n 
C3 C4 NAG sing 262 n n 
C3 O3 NAG sing 263 n n 
C3 H3 NAG sing 264 n n 
C4 C5 NAG sing 265 n n 
C4 O4 NAG sing 266 n n 
C4 H4 NAG sing 267 n n 
C5 C6 NAG sing 268 n n 
C5 O5 NAG sing 269 n n 
C5 H5 NAG sing 270 n n 
C6 O6 NAG sing 271 n n 
C6 H61 NAG sing 272 n n 
C6 H62 NAG sing 273 n n 
C7 C8 NAG sing 274 n n 
C7 N2 NAG sing 275 n n 
C7 O7 NAG doub 276 n n 
C8 H81 NAG sing 277 n n 
C8 H82 NAG sing 278 n n 
C8 H83 NAG sing 279 n n 
N2 HN2 NAG sing 280 n n 
O1 HO1 NAG sing 281 n n 
O3 HO3 NAG sing 282 n n 
O4 HO4 NAG sing 283 n n 
O6 HO6 NAG sing 284 n n 
#
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.identifier
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
NAG DGlcpNAcb 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1 
NAG N-acetyl-b-D-glucopyranosamine 'COMMON NAME' GMML 1 
NAG b-D-GlcpNAc 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1 
NAG GlcNAc 'SNFG CARBOHYDRATE SYMBOL' GMML 1 
#
_atom_sites.entry_id                     8BT5 
_atom_sites.fract_transf_matrix[1][1]    0.016669 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.013957 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.012802 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 NAG A 1 501 501 NAG NAG . 
C 3 SO4 A 1 502 505 SO4 SO4 . 
D 3 SO4 A 1 503 508 SO4 SO4 . 
E 3 SO4 A 1 504 510 SO4 SO4 . 
F 4 DMS A 1 505 511 DMS DMS . 
G 5 EDO A 1 506 517 EDO EDO . 
H 5 EDO A 1 507 521 EDO EDO . 
I 5 EDO A 1 508 901 EDO EDO . 
J 5 EDO A 1 509 1001 EDO EDO . 
K 6 REH A 1 510 1701 REH XXX . 
L 4 DMS A 1 511 1801 DMS DMS . 
M 3 SO4 A 1 512 1 SO4 SO4 . 
N 3 SO4 A 1 513 2 SO4 SO4 . 
O 7 HOH A 1 601 14 HOH HOH . 
O 7 HOH A 2 602 606 HOH HOH . 
O 7 HOH A 3 603 622 HOH HOH . 
O 7 HOH A 4 604 608 HOH HOH . 
O 7 HOH A 5 605 620 HOH HOH . 
O 7 HOH A 6 606 647 HOH HOH . 
O 7 HOH A 7 607 644 HOH HOH . 
O 7 HOH A 8 608 602 HOH HOH . 
O 7 HOH A 9 609 650 HOH HOH . 
O 7 HOH A 10 610 689 HOH HOH . 
O 7 HOH A 11 611 690 HOH HOH . 
O 7 HOH A 12 612 635 HOH HOH . 
O 7 HOH A 13 613 694 HOH HOH . 
O 7 HOH A 14 614 7 HOH HOH . 
O 7 HOH A 15 615 638 HOH HOH . 
O 7 HOH A 16 616 634 HOH HOH . 
O 7 HOH A 17 617 655 HOH HOH . 
O 7 HOH A 18 618 674 HOH HOH . 
O 7 HOH A 19 619 618 HOH HOH . 
O 7 HOH A 20 620 640 HOH HOH . 
O 7 HOH A 21 621 11 HOH HOH . 
O 7 HOH A 22 622 691 HOH HOH . 
O 7 HOH A 23 623 642 HOH HOH . 
O 7 HOH A 24 624 632 HOH HOH . 
O 7 HOH A 25 625 652 HOH HOH . 
O 7 HOH A 26 626 744 HOH HOH . 
O 7 HOH A 27 627 616 HOH HOH . 
O 7 HOH A 28 628 651 HOH HOH . 
O 7 HOH A 29 629 643 HOH HOH . 
O 7 HOH A 30 630 636 HOH HOH . 
O 7 HOH A 31 631 631 HOH HOH . 
O 7 HOH A 32 632 680 HOH HOH . 
O 7 HOH A 33 633 8 HOH HOH . 
O 7 HOH A 34 634 673 HOH HOH . 
O 7 HOH A 35 635 666 HOH HOH . 
O 7 HOH A 36 636 641 HOH HOH . 
O 7 HOH A 37 637 648 HOH HOH . 
O 7 HOH A 38 638 653 HOH HOH . 
O 7 HOH A 39 639 626 HOH HOH . 
O 7 HOH A 40 640 668 HOH HOH . 
O 7 HOH A 41 641 677 HOH HOH . 
O 7 HOH A 42 642 699 HOH HOH . 
O 7 HOH A 43 643 633 HOH HOH . 
O 7 HOH A 44 644 675 HOH HOH . 
O 7 HOH A 45 645 649 HOH HOH . 
O 7 HOH A 46 646 658 HOH HOH . 
O 7 HOH A 47 647 15 HOH HOH . 
O 7 HOH A 48 648 6 HOH HOH . 
O 7 HOH A 49 649 637 HOH HOH . 
O 7 HOH A 50 650 657 HOH HOH . 
O 7 HOH A 51 651 659 HOH HOH . 
O 7 HOH A 52 652 727 HOH HOH . 
O 7 HOH A 53 653 669 HOH HOH . 
O 7 HOH A 54 654 13 HOH HOH . 
O 7 HOH A 55 655 670 HOH HOH . 
O 7 HOH A 56 656 665 HOH HOH . 
O 7 HOH A 57 657 698 HOH HOH . 
O 7 HOH A 58 658 687 HOH HOH . 
O 7 HOH A 59 659 700 HOH HOH . 
O 7 HOH A 60 660 703 HOH HOH . 
O 7 HOH A 61 661 709 HOH HOH . 
O 7 HOH A 62 662 676 HOH HOH . 
O 7 HOH A 63 663 693 HOH HOH . 
O 7 HOH A 64 664 721 HOH HOH . 
O 7 HOH A 65 665 697 HOH HOH . 
O 7 HOH A 66 666 701 HOH HOH . 
O 7 HOH A 67 667 683 HOH HOH . 
O 7 HOH A 68 668 695 HOH HOH . 
O 7 HOH A 69 669 681 HOH HOH . 
O 7 HOH A 70 670 731 HOH HOH . 
O 7 HOH A 71 671 725 HOH HOH . 
O 7 HOH A 72 672 714 HOH HOH . 
O 7 HOH A 73 673 749 HOH HOH . 
O 7 HOH A 74 674 710 HOH HOH . 
O 7 HOH A 75 675 10 HOH HOH . 
O 7 HOH A 76 676 724 HOH HOH . 
O 7 HOH A 77 677 718 HOH HOH . 
O 7 HOH A 78 678 720 HOH HOH . 
O 7 HOH A 79 679 678 HOH HOH . 
O 7 HOH A 80 680 737 HOH HOH . 
O 7 HOH A 81 681 715 HOH HOH . 
O 7 HOH A 82 682 722 HOH HOH . 
O 7 HOH A 83 683 736 HOH HOH . 
O 7 HOH A 84 684 723 HOH HOH . 
O 7 HOH A 85 685 716 HOH HOH . 
O 7 HOH A 86 686 9 HOH HOH . 
O 7 HOH A 87 687 688 HOH HOH . 
O 7 HOH A 88 688 719 HOH HOH . 
O 7 HOH A 89 689 12 HOH HOH . 
O 7 HOH A 90 690 16 HOH HOH . 
O 7 HOH A 91 691 735 HOH HOH . 
O 7 HOH A 92 692 750 HOH HOH . 
O 7 HOH A 93 693 734 HOH HOH . 
O 7 HOH A 94 694 732 HOH HOH . 
O 7 HOH A 95 695 745 HOH HOH . 
O 7 HOH A 96 696 733 HOH HOH . 
O 7 HOH A 97 697 753 HOH HOH . 
O 7 HOH A 98 698 747 HOH HOH . 
O 7 HOH A 99 699 739 HOH HOH . 
O 7 HOH A 100 700 761 HOH HOH . 
O 7 HOH A 101 701 772 HOH HOH . 
O 7 HOH A 102 702 776 HOH HOH . 
O 7 HOH A 103 703 773 HOH HOH . 
O 7 HOH A 104 704 782 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 NAG . . . B 2 4.176 -20.861 -0.815 1 34.98 ? C1 NAG 501 A 1 
HETATM 2 C C2 NAG . . . B 2 5.184 -21.429 -1.818 1 42 ? C2 NAG 501 A 1 
HETATM 3 C C3 NAG . . . B 2 6.616 -21.207 -1.334 1 42.47 ? C3 NAG 501 A 1 
HETATM 4 C C4 NAG . . . B 2 6.847 -19.751 -0.953 1 40.82 ? C4 NAG 501 A 1 
HETATM 5 C C5 NAG . . . B 2 5.788 -19.3 0.045 1 39.29 ? C5 NAG 501 A 1 
HETATM 6 C C6 NAG . . . B 2 5.893 -17.835 0.405 1 41.56 ? C6 NAG 501 A 1 
HETATM 7 C C7 NAG . . . B 2 4.557 -23.352 -3.213 1 52.57 ? C7 NAG 501 A 1 
HETATM 8 C C8 NAG . . . B 2 4.347 -24.836 -3.253 1 53.64 ? C8 NAG 501 A 1 
HETATM 9 N N2 NAG . . . B 2 4.939 -22.846 -2.037 1 47.72 ? N2 NAG 501 A 1 
HETATM 10 O O3 NAG . . . B 2 7.51 -21.573 -2.378 1 44.3 ? O3 NAG 501 A 1 
HETATM 11 O O4 NAG . . . B 2 8.136 -19.61 -0.369 1 40.54 ? O4 NAG 501 A 1 
HETATM 12 O O5 NAG . . . B 2 4.49 -19.493 -0.531 1 36.08 ? O5 NAG 501 A 1 
HETATM 13 O O6 NAG . . . B 2 5.719 -17.002 -0.734 1 42.79 ? O6 NAG 501 A 1 
HETATM 14 O O7 NAG . . . B 2 4.388 -22.644 -4.201 1 54.37 ? O7 NAG 501 A 1 
#
_model_server_stats.io_time_ms              14 
_model_server_stats.parse_time_ms           12 
_model_server_stats.create_model_time_ms    4 
_model_server_stats.query_time_ms           272 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           14 
#