data_8BTA # _model_server_result.job_id Br7x00-RlKNbSCSDZe4k_Q _model_server_result.datetime_utc '2024-11-13 06:41:06' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8bta # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"J","auth_seq_id":509}' # _entry.id 8BTA # _exptl.entry_id 8BTA _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 78.133 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'DIMETHYL SULFOXIDE' _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 8BTA _cell.length_a 59.783 _cell.length_b 72.273 _cell.length_c 78.199 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8BTA _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 D N N ? 4 H N N ? 4 I N N ? 4 J N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 24 A CYS 101 1_555 A SG CYS 106 A CYS 183 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.036 ? disulf ? disulf2 A SG CYS 53 A CYS 130 1_555 A SG CYS 59 A CYS 136 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.038 ? disulf ? disulf3 A SG CYS 202 A CYS 279 1_555 A SG CYS 208 A CYS 285 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.038 ? disulf ? disulf4 A SG CYS 229 A CYS 306 1_555 A SG CYS 241 A CYS 318 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.045 ? disulf ? disulf5 A SG CYS 309 A CYS 386 1_555 A SG CYS 372 A CYS 449 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.045 ? disulf ? disulf6 A SG CYS 336 A CYS 413 1_555 A SG CYS 355 A CYS 432 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.042 ? disulf ? disulf7 A SG CYS 363 A CYS 440 1_555 A SG CYS 368 A CYS 445 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.037 ? covale ? covale1 A ND2 ASN 19 A ASN 96 1_555 B C1 NAG . A NAG 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.44 ? # _chem_comp.formula 'C2 H6 O S' _chem_comp.formula_weight 78.133 _chem_comp.id DMS _chem_comp.mon_nstd_flag . _chem_comp.name 'DIMETHYL SULFOXIDE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag S O DMS doub 83 n n S C1 DMS sing 84 n n S C2 DMS sing 85 n n C1 H11 DMS sing 86 n n C1 H12 DMS sing 87 n n C1 H13 DMS sing 88 n n C2 H21 DMS sing 89 n n C2 H22 DMS sing 90 n n C2 H23 DMS sing 91 n n # _atom_sites.entry_id 8BTA _atom_sites.fract_transf_matrix[1][1] 0.016727 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013836 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.012788 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 NAG A 1 501 1453 NAG NAG . C 3 SO4 A 1 502 1457 SO4 SO4 . D 4 DMS A 1 503 1501 DMS DMS . E 5 EDO A 1 504 1701 EDO EDO . F 5 EDO A 1 505 2101 EDO EDO . G 6 RC6 A 1 506 2301 RC6 XXX . H 4 DMS A 1 507 2401 DMS DMS . I 4 DMS A 1 508 2501 DMS DMS . J 4 DMS A 1 509 2601 DMS DMS . K 3 SO4 A 1 510 1 SO4 SO4 . L 3 SO4 A 1 511 2 SO4 SO4 . M 7 HOH A 1 601 230 HOH HOH . M 7 HOH A 2 602 146 HOH HOH . M 7 HOH A 3 603 12 HOH HOH . M 7 HOH A 4 604 40 HOH HOH . M 7 HOH A 5 605 77 HOH HOH . M 7 HOH A 6 606 125 HOH HOH . M 7 HOH A 7 607 128 HOH HOH . M 7 HOH A 8 608 109 HOH HOH . M 7 HOH A 9 609 30 HOH HOH . M 7 HOH A 10 610 107 HOH HOH . M 7 HOH A 11 611 9 HOH HOH . M 7 HOH A 12 612 15 HOH HOH . M 7 HOH A 13 613 93 HOH HOH . M 7 HOH A 14 614 215 HOH HOH . M 7 HOH A 15 615 27 HOH HOH . M 7 HOH A 16 616 67 HOH HOH . M 7 HOH A 17 617 52 HOH HOH . M 7 HOH A 18 618 111 HOH HOH . M 7 HOH A 19 619 221 HOH HOH . M 7 HOH A 20 620 82 HOH HOH . M 7 HOH A 21 621 211 HOH HOH . M 7 HOH A 22 622 64 HOH HOH . M 7 HOH A 23 623 48 HOH HOH . M 7 HOH A 24 624 29 HOH HOH . M 7 HOH A 25 625 87 HOH HOH . M 7 HOH A 26 626 44 HOH HOH . M 7 HOH A 27 627 60 HOH HOH . M 7 HOH A 28 628 121 HOH HOH . M 7 HOH A 29 629 26 HOH HOH . M 7 HOH A 30 630 11 HOH HOH . M 7 HOH A 31 631 65 HOH HOH . M 7 HOH A 32 632 142 HOH HOH . M 7 HOH A 33 633 222 HOH HOH . M 7 HOH A 34 634 34 HOH HOH . M 7 HOH A 35 635 10 HOH HOH . M 7 HOH A 36 636 124 HOH HOH . M 7 HOH A 37 637 37 HOH HOH . M 7 HOH A 38 638 20 HOH HOH . M 7 HOH A 39 639 216 HOH HOH . M 7 HOH A 40 640 36 HOH HOH . M 7 HOH A 41 641 62 HOH HOH . M 7 HOH A 42 642 4 HOH HOH . M 7 HOH A 43 643 86 HOH HOH . M 7 HOH A 44 644 14 HOH HOH . M 7 HOH A 45 645 217 HOH HOH . M 7 HOH A 46 646 183 HOH HOH . M 7 HOH A 47 647 231 HOH HOH . M 7 HOH A 48 648 101 HOH HOH . M 7 HOH A 49 649 113 HOH HOH . M 7 HOH A 50 650 214 HOH HOH . M 7 HOH A 51 651 17 HOH HOH . M 7 HOH A 52 652 106 HOH HOH . M 7 HOH A 53 653 96 HOH HOH . M 7 HOH A 54 654 6 HOH HOH . M 7 HOH A 55 655 25 HOH HOH . M 7 HOH A 56 656 61 HOH HOH . M 7 HOH A 57 657 95 HOH HOH . M 7 HOH A 58 658 31 HOH HOH . M 7 HOH A 59 659 161 HOH HOH . M 7 HOH A 60 660 8 HOH HOH . M 7 HOH A 61 661 13 HOH HOH . M 7 HOH A 62 662 99 HOH HOH . M 7 HOH A 63 663 7 HOH HOH . M 7 HOH A 64 664 119 HOH HOH . M 7 HOH A 65 665 112 HOH HOH . M 7 HOH A 66 666 141 HOH HOH . M 7 HOH A 67 667 105 HOH HOH . M 7 HOH A 68 668 110 HOH HOH . M 7 HOH A 69 669 43 HOH HOH . M 7 HOH A 70 670 88 HOH HOH . M 7 HOH A 71 671 218 HOH HOH . M 7 HOH A 72 672 232 HOH HOH . M 7 HOH A 73 673 66 HOH HOH . M 7 HOH A 74 674 50 HOH HOH . M 7 HOH A 75 675 16 HOH HOH . M 7 HOH A 76 676 131 HOH HOH . M 7 HOH A 77 677 59 HOH HOH . M 7 HOH A 78 678 2 HOH HOH . M 7 HOH A 79 679 114 HOH HOH . M 7 HOH A 80 680 130 HOH HOH . M 7 HOH A 81 681 117 HOH HOH . M 7 HOH A 82 682 122 HOH HOH . M 7 HOH A 83 683 229 HOH HOH . M 7 HOH A 84 684 213 HOH HOH . M 7 HOH A 85 685 210 HOH HOH . M 7 HOH A 86 686 78 HOH HOH . M 7 HOH A 87 687 118 HOH HOH . M 7 HOH A 88 688 199 HOH HOH . M 7 HOH A 89 689 32 HOH HOH . M 7 HOH A 90 690 39 HOH HOH . M 7 HOH A 91 691 45 HOH HOH . M 7 HOH A 92 692 139 HOH HOH . M 7 HOH A 93 693 144 HOH HOH . M 7 HOH A 94 694 132 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 S S DMS . . . J 4 33.827 65.534 92.214 1 88.66 ? S DMS 509 A 1 HETATM 2 O O DMS . . . J 4 32.379 65.647 92.59 1 31.65 ? O DMS 509 A 1 HETATM 3 C C1 DMS . . . J 4 34.865 66.528 93.323 1 48.37 ? C1 DMS 509 A 1 HETATM 4 C C2 DMS . . . J 4 34.136 66.402 90.651 1 34.2 ? C2 DMS 509 A 1 # _model_server_stats.io_time_ms 14 _model_server_stats.parse_time_ms 24 _model_server_stats.create_model_time_ms 7 _model_server_stats.query_time_ms 292 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 4 #