data_8BTE # _model_server_result.job_id vcKgFr97hRBWVPtyJADaNQ _model_server_result.datetime_utc '2024-11-13 05:34:09' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8bte # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"I","auth_seq_id":508}' # _entry.id 8BTE # _exptl.entry_id 8BTE _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 237.639 _entity.id 6 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'methyl 2-(4-chloranylindol-1-yl)-2-oxidanylidene-ethanoate' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 8BTE _cell.length_a 59.91 _cell.length_b 71.78 _cell.length_c 78.11 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8BTE _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 6 _struct_asym.id I _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 24 A CYS 101 1_555 A SG CYS 106 A CYS 183 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? disulf ? disulf2 A SG CYS 53 A CYS 130 1_555 A SG CYS 59 A CYS 136 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.037 ? disulf ? disulf3 A SG CYS 229 A CYS 306 1_555 A SG CYS 241 A CYS 318 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.046 ? disulf ? disulf4 A SG CYS 309 A CYS 386 1_555 A SG CYS 372 A CYS 449 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.026 ? disulf ? disulf5 A SG CYS 336 A CYS 413 1_555 A SG CYS 355 A CYS 432 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.038 ? disulf ? disulf6 A SG CYS 363 A CYS 440 1_555 A SG CYS 368 A CYS 445 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.028 ? covale ? covale1 A ND2 ASN 19 A ASN 96 1_555 B C1 NAG . A NAG 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.433 ? # _chem_comp.formula 'C11 H8 Cl N O3' _chem_comp.formula_weight 237.639 _chem_comp.id RIX _chem_comp.mon_nstd_flag . _chem_comp.name 'methyl 2-(4-chloranylindol-1-yl)-2-oxidanylidene-ethanoate' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C09 C08 RIX doub 325 n y C09 C10 RIX sing 326 n y C08 N07 RIX sing 327 n y CL16 C11 RIX sing 328 n n C01 O02 RIX sing 329 n n O04 C03 RIX doub 330 n n C10 C11 RIX doub 331 n y C10 C15 RIX sing 332 n y C03 O02 RIX sing 333 n n C03 C05 RIX sing 334 n n N07 C15 RIX sing 335 n y N07 C05 RIX sing 336 n n C11 C12 RIX sing 337 n y C15 C14 RIX doub 338 n y C05 O06 RIX doub 339 n n C12 C13 RIX doub 340 n y C14 C13 RIX sing 341 n y C01 H1 RIX sing 342 n n C01 H2 RIX sing 343 n n C01 H3 RIX sing 344 n n C08 H4 RIX sing 345 n n C09 H5 RIX sing 346 n n C12 H6 RIX sing 347 n n C13 H7 RIX sing 348 n n C14 H8 RIX sing 349 n n # _atom_sites.entry_id 8BTE _atom_sites.fract_transf_matrix[1][1] 0.016692 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013931 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.012802 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 NAG A 1 501 1453 NAG NAG . C 3 SO4 A 1 502 1455 SO4 SO4 . D 3 SO4 A 1 503 1457 SO4 SO4 . E 4 DMS A 1 504 1501 DMS DMS . F 5 EDO A 1 505 1701 EDO EDO . G 5 EDO A 1 506 2101 EDO EDO . H 5 EDO A 1 507 2201 EDO EDO . I 6 RIX A 1 508 2301 RIX XXX . J 3 SO4 A 1 509 1 SO4 SO4 . K 3 SO4 A 1 510 2 SO4 SO4 . L 3 SO4 A 1 511 3 SO4 SO4 . M 3 SO4 A 1 512 4 SO4 SO4 . N 7 HOH A 1 601 30 HOH HOH . N 7 HOH A 2 602 12 HOH HOH . N 7 HOH A 3 603 77 HOH HOH . N 7 HOH A 4 604 15 HOH HOH . N 7 HOH A 5 605 5 HOH HOH . N 7 HOH A 6 606 146 HOH HOH . N 7 HOH A 7 607 9 HOH HOH . N 7 HOH A 8 608 211 HOH HOH . N 7 HOH A 9 609 93 HOH HOH . N 7 HOH A 10 610 64 HOH HOH . N 7 HOH A 11 611 125 HOH HOH . N 7 HOH A 12 612 107 HOH HOH . N 7 HOH A 13 613 56 HOH HOH . N 7 HOH A 14 614 128 HOH HOH . N 7 HOH A 15 615 111 HOH HOH . N 7 HOH A 16 616 142 HOH HOH . N 7 HOH A 17 617 26 HOH HOH . N 7 HOH A 18 618 44 HOH HOH . N 7 HOH A 19 619 109 HOH HOH . N 7 HOH A 20 620 27 HOH HOH . N 7 HOH A 21 621 54 HOH HOH . N 7 HOH A 22 622 233 HOH HOH . N 7 HOH A 23 623 65 HOH HOH . N 7 HOH A 24 624 216 HOH HOH . N 7 HOH A 25 625 52 HOH HOH . N 7 HOH A 26 626 85 HOH HOH . N 7 HOH A 27 627 34 HOH HOH . N 7 HOH A 28 628 124 HOH HOH . N 7 HOH A 29 629 11 HOH HOH . N 7 HOH A 30 630 82 HOH HOH . N 7 HOH A 31 631 36 HOH HOH . N 7 HOH A 32 632 215 HOH HOH . N 7 HOH A 33 633 132 HOH HOH . N 7 HOH A 34 634 217 HOH HOH . N 7 HOH A 35 635 67 HOH HOH . N 7 HOH A 36 636 4 HOH HOH . N 7 HOH A 37 637 40 HOH HOH . N 7 HOH A 38 638 57 HOH HOH . N 7 HOH A 39 639 198 HOH HOH . N 7 HOH A 40 640 42 HOH HOH . N 7 HOH A 41 641 232 HOH HOH . N 7 HOH A 42 642 60 HOH HOH . N 7 HOH A 43 643 62 HOH HOH . N 7 HOH A 44 644 18 HOH HOH . N 7 HOH A 45 645 222 HOH HOH . N 7 HOH A 46 646 10 HOH HOH . N 7 HOH A 47 647 99 HOH HOH . N 7 HOH A 48 648 101 HOH HOH . N 7 HOH A 49 649 37 HOH HOH . N 7 HOH A 50 650 13 HOH HOH . N 7 HOH A 51 651 86 HOH HOH . N 7 HOH A 52 652 14 HOH HOH . N 7 HOH A 53 653 25 HOH HOH . N 7 HOH A 54 654 106 HOH HOH . N 7 HOH A 55 655 231 HOH HOH . N 7 HOH A 56 656 221 HOH HOH . N 7 HOH A 57 657 121 HOH HOH . N 7 HOH A 58 658 61 HOH HOH . N 7 HOH A 59 659 6 HOH HOH . N 7 HOH A 60 660 96 HOH HOH . N 7 HOH A 61 661 20 HOH HOH . N 7 HOH A 62 662 48 HOH HOH . N 7 HOH A 63 663 89 HOH HOH . N 7 HOH A 64 664 29 HOH HOH . N 7 HOH A 65 665 95 HOH HOH . N 7 HOH A 66 666 43 HOH HOH . N 7 HOH A 67 667 105 HOH HOH . N 7 HOH A 68 668 229 HOH HOH . N 7 HOH A 69 669 2 HOH HOH . N 7 HOH A 70 670 113 HOH HOH . N 7 HOH A 71 671 114 HOH HOH . N 7 HOH A 72 672 71 HOH HOH . N 7 HOH A 73 673 120 HOH HOH . N 7 HOH A 74 674 141 HOH HOH . N 7 HOH A 75 675 214 HOH HOH . N 7 HOH A 76 676 183 HOH HOH . N 7 HOH A 77 677 119 HOH HOH . N 7 HOH A 78 678 50 HOH HOH . N 7 HOH A 79 679 7 HOH HOH . N 7 HOH A 80 680 8 HOH HOH . N 7 HOH A 81 681 83 HOH HOH . N 7 HOH A 82 682 199 HOH HOH . N 7 HOH A 83 683 110 HOH HOH . N 7 HOH A 84 684 230 HOH HOH . N 7 HOH A 85 685 112 HOH HOH . N 7 HOH A 86 686 66 HOH HOH . N 7 HOH A 87 687 161 HOH HOH . N 7 HOH A 88 688 129 HOH HOH . N 7 HOH A 89 689 17 HOH HOH . N 7 HOH A 90 690 218 HOH HOH . N 7 HOH A 91 691 213 HOH HOH . N 7 HOH A 92 692 131 HOH HOH . N 7 HOH A 93 693 223 HOH HOH . N 7 HOH A 94 694 59 HOH HOH . N 7 HOH A 95 695 220 HOH HOH . N 7 HOH A 96 696 88 HOH HOH . N 7 HOH A 97 697 72 HOH HOH . N 7 HOH A 98 698 117 HOH HOH . N 7 HOH A 99 699 16 HOH HOH . N 7 HOH A 100 700 130 HOH HOH . N 7 HOH A 101 701 219 HOH HOH . N 7 HOH A 102 702 116 HOH HOH . N 7 HOH A 103 703 210 HOH HOH . N 7 HOH A 104 704 158 HOH HOH . N 7 HOH A 105 705 201 HOH HOH . N 7 HOH A 106 706 118 HOH HOH . N 7 HOH A 107 707 32 HOH HOH . N 7 HOH A 108 708 144 HOH HOH . N 7 HOH A 109 709 45 HOH HOH . N 7 HOH A 110 710 39 HOH HOH . N 7 HOH A 111 711 139 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C01 RIX . . . I 6 22.933 67.065 71.663 1 30.8 ? C01 RIX 508 A 1 HETATM 2 C C03 RIX . . . I 6 25.001 67.857 72.406 1 31.96 ? C03 RIX 508 A 1 HETATM 3 C C05 RIX . . . I 6 26.39 67.646 72.941 1 35.08 ? C05 RIX 508 A 1 HETATM 4 C C08 RIX . . . I 6 26.678 65.607 71.419 1 27.71 ? C08 RIX 508 A 1 HETATM 5 C C09 RIX . . . I 6 27.797 64.627 71.244 1 28.17 ? C09 RIX 508 A 1 HETATM 6 C C10 RIX . . . I 6 28.901 65.094 72.187 1 27.75 ? C10 RIX 508 A 1 HETATM 7 C C11 RIX . . . I 6 30.156 64.564 72.441 1 29.75 ? C11 RIX 508 A 1 HETATM 8 C C12 RIX . . . I 6 31.035 65.123 73.355 1 31.03 ? C12 RIX 508 A 1 HETATM 9 C C13 RIX . . . I 6 30.643 66.282 74.039 1 29.2 ? C13 RIX 508 A 1 HETATM 10 C C14 RIX . . . I 6 29.391 66.835 73.795 1 29.91 ? C14 RIX 508 A 1 HETATM 11 C C15 RIX . . . I 6 28.522 66.235 72.856 1 33.16 ? C15 RIX 508 A 1 HETATM 12 N N07 RIX . . . I 6 27.158 66.564 72.411 1 28.96 ? N07 RIX 508 A 1 HETATM 13 O O02 RIX . . . I 6 24.079 66.812 72.419 1 32.55 ? O02 RIX 508 A 1 HETATM 14 O O04 RIX . . . I 6 24.719 68.926 72.022 1 33.5 ? O04 RIX 508 A 1 HETATM 15 O O06 RIX . . . I 6 26.836 68.375 73.751 1 33.61 ? O06 RIX 508 A 1 HETATM 16 CL CL16 RIX . . . I 6 30.533 63.108 71.542 1 35.12 ? CL16 RIX 508 A 1 # _model_server_stats.io_time_ms 11 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 13 _model_server_stats.query_time_ms 263 _model_server_stats.encode_time_ms 6 _model_server_stats.element_count 16 #