data_8BTH # _model_server_result.job_id svMlfqoUA2xm-IOLXfHCAw _model_server_result.datetime_utc '2024-11-05 04:53:07' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8bth # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":501}' # _entry.id 8BTH # _exptl.entry_id 8BTH _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 221.208 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 2-acetamido-2-deoxy-beta-D-glucopyranose _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 8BTH _cell.length_a 59.76 _cell.length_b 71.86 _cell.length_c 78.06 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8BTH _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 24 A CYS 101 1_555 A SG CYS 106 A CYS 183 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.039 ? disulf ? disulf2 A SG CYS 53 A CYS 130 1_555 A SG CYS 59 A CYS 136 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? disulf ? disulf3 A SG CYS 202 A CYS 279 1_555 A SG CYS 208 A CYS 285 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.039 ? disulf ? disulf4 A SG CYS 229 A CYS 306 1_555 A SG CYS 241 A CYS 318 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.046 ? disulf ? disulf5 A SG CYS 309 A CYS 386 1_555 A SG CYS 372 A CYS 449 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.037 ? disulf ? disulf6 A SG CYS 336 A CYS 413 1_555 A SG CYS 355 A CYS 432 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.045 ? disulf ? disulf7 A SG CYS 363 A CYS 440 1_555 A SG CYS 368 A CYS 445 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.012 ? covale ? covale1 A ND2 ASN 19 A ASN 96 1_555 B C1 NAG . A NAG 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.435 ? # _chem_comp.formula 'C8 H15 N O6' _chem_comp.formula_weight 221.208 _chem_comp.id NAG _chem_comp.mon_nstd_flag . _chem_comp.name 2-acetamido-2-deoxy-beta-D-glucopyranose _chem_comp.type 'd-saccharide, beta linking' _chem_comp.pdbx_synonyms N-acetyl-beta-D-glucosamine;2-acetamido-2-deoxy-beta-D-glucose;2-acetamido-2-deoxy-D-glucose;2-acetamido-2-deoxy-glucose;N-ACETYL-D-GLUCOSAMINE # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.identifier _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version NAG DGlcpNAcb 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1 NAG N-acetyl-b-D-glucopyranosamine 'COMMON NAME' GMML 1 NAG b-D-GlcpNAc 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1 NAG GlcNAc 'SNFG CARBOHYDRATE SYMBOL' GMML 1 # _atom_sites.entry_id 8BTH _atom_sites.fract_transf_matrix[1][1] 0.016734 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013916 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.012811 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 NAG A 1 501 1453 NAG NAG . C 3 SO4 A 1 502 1455 SO4 SO4 . D 3 SO4 A 1 503 1456 SO4 SO4 . E 3 SO4 A 1 504 1457 SO4 SO4 . F 4 DMS A 1 505 1501 DMS DMS . G 5 EDO A 1 506 1701 EDO EDO . H 5 EDO A 1 507 2101 EDO EDO . I 5 EDO A 1 508 2201 EDO EDO . J 6 RJ0 A 1 509 2301 RJ0 XXX . K 4 DMS A 1 510 2401 DMS DMS . L 3 SO4 A 1 511 1 SO4 SO4 . M 3 SO4 A 1 512 2 SO4 SO4 . N 7 HOH A 1 601 12 HOH HOH . N 7 HOH A 2 602 175 HOH HOH . N 7 HOH A 3 603 224 HOH HOH . N 7 HOH A 4 604 146 HOH HOH . N 7 HOH A 5 605 29 HOH HOH . N 7 HOH A 6 606 226 HOH HOH . N 7 HOH A 7 607 225 HOH HOH . N 7 HOH A 8 608 85 HOH HOH . N 7 HOH A 9 609 228 HOH HOH . N 7 HOH A 10 610 10 HOH HOH . N 7 HOH A 11 611 107 HOH HOH . N 7 HOH A 12 612 15 HOH HOH . N 7 HOH A 13 613 125 HOH HOH . N 7 HOH A 14 614 18 HOH HOH . N 7 HOH A 15 615 52 HOH HOH . N 7 HOH A 16 616 111 HOH HOH . N 7 HOH A 17 617 5 HOH HOH . N 7 HOH A 18 618 221 HOH HOH . N 7 HOH A 19 619 27 HOH HOH . N 7 HOH A 20 620 9 HOH HOH . N 7 HOH A 21 621 215 HOH HOH . N 7 HOH A 22 622 128 HOH HOH . N 7 HOH A 23 623 40 HOH HOH . N 7 HOH A 24 624 77 HOH HOH . N 7 HOH A 25 625 60 HOH HOH . N 7 HOH A 26 626 82 HOH HOH . N 7 HOH A 27 627 211 HOH HOH . N 7 HOH A 28 628 4 HOH HOH . N 7 HOH A 29 629 11 HOH HOH . N 7 HOH A 30 630 57 HOH HOH . N 7 HOH A 31 631 109 HOH HOH . N 7 HOH A 32 632 87 HOH HOH . N 7 HOH A 33 633 106 HOH HOH . N 7 HOH A 34 634 14 HOH HOH . N 7 HOH A 35 635 217 HOH HOH . N 7 HOH A 36 636 37 HOH HOH . N 7 HOH A 37 637 64 HOH HOH . N 7 HOH A 38 638 30 HOH HOH . N 7 HOH A 39 639 142 HOH HOH . N 7 HOH A 40 640 124 HOH HOH . N 7 HOH A 41 641 86 HOH HOH . N 7 HOH A 42 642 56 HOH HOH . N 7 HOH A 43 643 34 HOH HOH . N 7 HOH A 44 644 44 HOH HOH . N 7 HOH A 45 645 212 HOH HOH . N 7 HOH A 46 646 67 HOH HOH . N 7 HOH A 47 647 65 HOH HOH . N 7 HOH A 48 648 216 HOH HOH . N 7 HOH A 49 649 83 HOH HOH . N 7 HOH A 50 650 121 HOH HOH . N 7 HOH A 51 651 48 HOH HOH . N 7 HOH A 52 652 93 HOH HOH . N 7 HOH A 53 653 96 HOH HOH . N 7 HOH A 54 654 99 HOH HOH . N 7 HOH A 55 655 36 HOH HOH . N 7 HOH A 56 656 229 HOH HOH . N 7 HOH A 57 657 61 HOH HOH . N 7 HOH A 58 658 222 HOH HOH . N 7 HOH A 59 659 71 HOH HOH . N 7 HOH A 60 660 70 HOH HOH . N 7 HOH A 61 661 101 HOH HOH . N 7 HOH A 62 662 25 HOH HOH . N 7 HOH A 63 663 113 HOH HOH . N 7 HOH A 64 664 105 HOH HOH . N 7 HOH A 65 665 137 HOH HOH . N 7 HOH A 66 666 6 HOH HOH . N 7 HOH A 67 667 13 HOH HOH . N 7 HOH A 68 668 54 HOH HOH . N 7 HOH A 69 669 214 HOH HOH . N 7 HOH A 70 670 95 HOH HOH . N 7 HOH A 71 671 62 HOH HOH . N 7 HOH A 72 672 227 HOH HOH . N 7 HOH A 73 673 2 HOH HOH . N 7 HOH A 74 674 198 HOH HOH . N 7 HOH A 75 675 92 HOH HOH . N 7 HOH A 76 676 26 HOH HOH . N 7 HOH A 77 677 43 HOH HOH . N 7 HOH A 78 678 141 HOH HOH . N 7 HOH A 79 679 120 HOH HOH . N 7 HOH A 80 680 17 HOH HOH . N 7 HOH A 81 681 183 HOH HOH . N 7 HOH A 82 682 223 HOH HOH . N 7 HOH A 83 683 66 HOH HOH . N 7 HOH A 84 684 112 HOH HOH . N 7 HOH A 85 685 117 HOH HOH . N 7 HOH A 86 686 161 HOH HOH . N 7 HOH A 87 687 50 HOH HOH . N 7 HOH A 88 688 8 HOH HOH . N 7 HOH A 89 689 110 HOH HOH . N 7 HOH A 90 690 42 HOH HOH . N 7 HOH A 91 691 20 HOH HOH . N 7 HOH A 92 692 31 HOH HOH . N 7 HOH A 93 693 75 HOH HOH . N 7 HOH A 94 694 218 HOH HOH . N 7 HOH A 95 695 72 HOH HOH . N 7 HOH A 96 696 88 HOH HOH . N 7 HOH A 97 697 114 HOH HOH . N 7 HOH A 98 698 122 HOH HOH . N 7 HOH A 99 699 7 HOH HOH . N 7 HOH A 100 700 130 HOH HOH . N 7 HOH A 101 701 59 HOH HOH . N 7 HOH A 102 702 119 HOH HOH . N 7 HOH A 103 703 129 HOH HOH . N 7 HOH A 104 704 16 HOH HOH . N 7 HOH A 105 705 210 HOH HOH . N 7 HOH A 106 706 89 HOH HOH . N 7 HOH A 107 707 213 HOH HOH . N 7 HOH A 108 708 131 HOH HOH . N 7 HOH A 109 709 219 HOH HOH . N 7 HOH A 110 710 220 HOH HOH . N 7 HOH A 111 711 116 HOH HOH . N 7 HOH A 112 712 201 HOH HOH . N 7 HOH A 113 713 158 HOH HOH . N 7 HOH A 114 714 78 HOH HOH . N 7 HOH A 115 715 118 HOH HOH . N 7 HOH A 116 716 199 HOH HOH . N 7 HOH A 117 717 140 HOH HOH . N 7 HOH A 118 718 32 HOH HOH . N 7 HOH A 119 719 45 HOH HOH . N 7 HOH A 120 720 39 HOH HOH . N 7 HOH A 121 721 144 HOH HOH . N 7 HOH A 122 722 139 HOH HOH . N 7 HOH A 123 723 132 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 NAG . . . B 2 34.069 92.731 78.969 1 39.17 ? C1 NAG 501 A 1 HETATM 2 C C2 NAG . . . B 2 35.145 93.194 79.95 1 45.29 ? C2 NAG 501 A 1 HETATM 3 C C3 NAG . . . B 2 36.539 92.941 79.38 1 44.85 ? C3 NAG 501 A 1 HETATM 4 C C4 NAG . . . B 2 36.684 91.505 78.899 1 44.66 ? C4 NAG 501 A 1 HETATM 5 C C5 NAG . . . B 2 35.549 91.148 77.949 1 43.09 ? C5 NAG 501 A 1 HETATM 6 C C6 NAG . . . B 2 35.569 89.698 77.521 1 43.53 ? C6 NAG 501 A 1 HETATM 7 C C7 NAG . . . B 2 34.365 95.048 81.362 1 53.63 ? C7 NAG 501 A 1 HETATM 8 C C8 NAG . . . B 2 34.294 96.537 81.515 1 55.06 ? C8 NAG 501 A 1 HETATM 9 N N2 NAG . . . B 2 34.982 94.604 80.263 1 48.85 ? N2 NAG 501 A 1 HETATM 10 O O3 NAG . . . B 2 37.499 93.205 80.396 1 47.38 ? O3 NAG 501 A 1 HETATM 11 O O4 NAG . . . B 2 37.925 91.369 78.216 1 44.8 ? O4 NAG 501 A 1 HETATM 12 O O5 NAG . . . B 2 34.297 91.368 78.611 1 40.28 ? O5 NAG 501 A 1 HETATM 13 O O6 NAG . . . B 2 35.487 88.827 78.641 1 44.48 ? O6 NAG 501 A 1 HETATM 14 O O7 NAG . . . B 2 33.882 94.283 82.193 1 54.69 ? O7 NAG 501 A 1 # _model_server_stats.io_time_ms 14 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 14 _model_server_stats.query_time_ms 273 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 14 #