data_8BU7 # _model_server_result.job_id XeCPjcrq3i8FuECOctaDog _model_server_result.datetime_utc '2024-11-29 15:45:57' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8bu7 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"CA","auth_seq_id":1101}' # _entry.id 8BU7 # _exptl.entry_id 8BU7 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 473.352 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1-[2,6-bis(chloranyl)phenyl]-6-[[4-(2-hydroxyethyloxy)phenyl]methyl]-3-propan-2-yl-5H-pyrazolo[3,4-d]pyrimidin-4-one _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 8BU7 _cell.length_a 248.683 _cell.length_b 248.683 _cell.length_c 218.597 _cell.Z_PDB 18 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8BU7 _symmetry.cell_setting ? _symmetry.Int_Tables_number 152 _symmetry.space_group_name_Hall 'P 31 2"' _symmetry.space_group_name_H-M 'P 31 2 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? trimeric 3 author_defined_assembly 1 ? trimeric 3 author_defined_assembly 2 ? trimeric 3 author_defined_assembly 3 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,C,J,K,L,M,N,O,P,Q,R,S,T,U 1 1 D,E,F,V,W,X,Y,Z,AA,BA,CA,DA,EA,FA,GA,HA 2 1 G,H,I,IA,JA,KA,LA,MA,NA,OA,PA,QA,RA,SA,TA 3 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 5 K N N ? 5 CA N N ? 5 IA N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 22 A CYS 18 1_555 A SG CYS 317 A CYS 313 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.052 ? covale ? covale1 B C TYR 184 B TYR 892 1_555 B N TPO 185 B TPO 893 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.34 ? covale ? covale2 B C TPO 185 B TPO 893 1_555 B N ASN 186 B ASN 894 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale3 E C TYR 184 E TYR 892 1_555 E N TPO 185 E TPO 893 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.325 ? covale ? covale4 E C TPO 185 E TPO 893 1_555 E N ASN 186 E ASN 894 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? covale ? covale5 H C TYR 184 H TYR 892 1_555 H N TPO 185 H TPO 893 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.325 ? covale ? covale6 H C TPO 185 H TPO 893 1_555 H N ASN 186 H ASN 894 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.341 ? # _chem_comp.formula 'C23 H22 Cl2 N4 O3' _chem_comp.formula_weight 473.352 _chem_comp.id RS5 _chem_comp.mon_nstd_flag . _chem_comp.name 1-[2,6-bis(chloranyl)phenyl]-6-[[4-(2-hydroxyethyloxy)phenyl]methyl]-3-propan-2-yl-5H-pyrazolo[3,4-d]pyrimidin-4-one _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C17 C15 RS5 sing 284 n n C16 C15 RS5 sing 285 n n C15 C14 RS5 sing 286 n n C14 N4 RS5 doub 287 n y C14 C12 RS5 sing 288 n y O3 C11 RS5 doub 289 n n N4 N3 RS5 sing 290 n y CL1 C19 RS5 sing 291 n n C12 C11 RS5 sing 292 n n C12 C13 RS5 doub 293 n y C11 N1 RS5 sing 294 n n N3 C13 RS5 sing 295 n y N3 C18 RS5 sing 296 n n C19 C18 RS5 doub 297 n y C19 C20 RS5 sing 298 n y C13 N2 RS5 sing 299 n n C18 C23 RS5 sing 300 n y N1 C10 RS5 sing 301 n n C20 C21 RS5 doub 302 n y N2 C10 RS5 doub 303 n n C23 CL2 RS5 sing 304 n n C23 C22 RS5 doub 305 n y C10 C9 RS5 sing 306 n n C21 C22 RS5 sing 307 n y C9 C6 RS5 sing 308 n n C5 C6 RS5 doub 309 n y C5 C4 RS5 sing 310 n y C6 C7 RS5 sing 311 n y C4 C3 RS5 doub 312 n y C7 C8 RS5 doub 313 n y C3 C8 RS5 sing 314 n y C3 O2 RS5 sing 315 n n O2 C2 RS5 sing 316 n n C2 C1 RS5 sing 317 n n C1 O1 RS5 sing 318 n n C1 H3 RS5 sing 319 n n C1 H2 RS5 sing 320 n n C2 H4 RS5 sing 321 n n C2 H5 RS5 sing 322 n n C4 H6 RS5 sing 323 n n C5 H7 RS5 sing 324 n n O1 H1 RS5 sing 325 n n C7 H8 RS5 sing 326 n n C8 H9 RS5 sing 327 n n C9 H11 RS5 sing 328 n n C9 H10 RS5 sing 329 n n N1 H23 RS5 sing 330 n n C15 H13 RS5 sing 331 n n C16 H14 RS5 sing 332 n n C16 H15 RS5 sing 333 n n C16 H16 RS5 sing 334 n n C17 H17 RS5 sing 335 n n C17 H19 RS5 sing 336 n n C17 H18 RS5 sing 337 n n C20 H20 RS5 sing 338 n n C21 H21 RS5 sing 339 n n C22 H22 RS5 sing 340 n n # _atom_sites.entry_id 8BU7 _atom_sites.fract_transf_matrix[1][1] 0.004021 _atom_sites.fract_transf_matrix[1][2] 0.002322 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.004643 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.004575 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code J 4 EDO A 1 1201 1201 EDO EDO . K 5 RS5 A 1 1202 1101 RS5 195 . L 6 SO4 A 1 1203 3 SO4 SO4 . M 6 SO4 A 1 1204 5 SO4 SO4 . N 6 SO4 A 1 1205 6 SO4 SO4 . O 6 SO4 A 1 1206 10 SO4 SO4 . P 6 SO4 A 1 1207 11 SO4 SO4 . Q 6 SO4 A 1 1208 27 SO4 SO4 . R 6 SO4 C 1 301 4 SO4 SO4 . S 6 SO4 C 1 302 16 SO4 SO4 . T 6 SO4 C 1 303 22 SO4 SO4 . U 6 SO4 C 1 304 30 SO4 SO4 . V 4 EDO D 1 1201 1201 EDO EDO . W 6 SO4 D 1 1202 2 SO4 SO4 . X 6 SO4 D 1 1203 7 SO4 SO4 . Y 6 SO4 D 1 1204 9 SO4 SO4 . Z 6 SO4 D 1 1205 20 SO4 SO4 . AA 6 SO4 D 1 1206 25 SO4 SO4 . BA 6 SO4 D 1 1207 29 SO4 SO4 . CA 5 RS5 E 1 1101 1101 RS5 195 . DA 4 EDO F 1 301 301 EDO EDO . EA 6 SO4 F 1 302 17 SO4 SO4 . FA 6 SO4 F 1 303 21 SO4 SO4 . GA 6 SO4 F 1 304 26 SO4 SO4 . HA 6 SO4 F 1 305 31 SO4 SO4 . IA 5 RS5 G 1 1201 1101 RS5 195 . JA 6 SO4 G 1 1202 1 SO4 SO4 . KA 6 SO4 G 1 1203 8 SO4 SO4 . LA 6 SO4 G 1 1204 13 SO4 SO4 . MA 6 SO4 G 1 1205 14 SO4 SO4 . NA 6 SO4 G 1 1206 15 SO4 SO4 . OA 6 SO4 G 1 1207 19 SO4 SO4 . PA 6 SO4 G 1 1208 28 SO4 SO4 . QA 6 SO4 H 1 1101 33 SO4 SO4 . RA 6 SO4 I 1 301 12 SO4 SO4 . SA 6 SO4 I 1 302 18 SO4 SO4 . TA 6 SO4 I 1 303 32 SO4 SO4 . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 RS5 . . . CA 5 106.2 62.654 -5.465 1 129.06 ? C1 RS5 1101 E 1 HETATM 2 C C2 RS5 . . . CA 5 105.247 63.492 -6.309 1 128.48 ? C2 RS5 1101 E 1 HETATM 3 C C3 RS5 . . . CA 5 105.225 64.902 -8.209 1 131.57 ? C3 RS5 1101 E 1 HETATM 4 C C4 RS5 . . . CA 5 103.907 65.261 -7.943 1 126.36 ? C4 RS5 1101 E 1 HETATM 5 C C5 RS5 . . . CA 5 103.226 66.105 -8.81 1 124.9 ? C5 RS5 1101 E 1 HETATM 6 C C6 RS5 . . . CA 5 103.877 66.566 -9.938 1 125.86 ? C6 RS5 1101 E 1 HETATM 7 O O1 RS5 . . . CA 5 105.433 61.772 -4.694 1 134.21 ? O1 RS5 1101 E 1 HETATM 8 C C7 RS5 . . . CA 5 105.18 66.215 -10.204 1 132.84 ? C7 RS5 1101 E 1 HETATM 9 C C8 RS5 . . . CA 5 105.856 65.382 -9.338 1 135.41 ? C8 RS5 1101 E 1 HETATM 10 C C9 RS5 . . . CA 5 103.242 67.485 -10.921 1 123.46 ? C9 RS5 1101 E 1 HETATM 11 C C10 RS5 . . . CA 5 103.653 68.94 -10.77 1 124.46 ? C10 RS5 1101 E 1 HETATM 12 C C11 RS5 . . . CA 5 103.206 71.124 -10.018 1 120.89 ? C11 RS5 1101 E 1 HETATM 13 C C12 RS5 . . . CA 5 104.34 71.546 -10.592 1 125.94 ? C12 RS5 1101 E 1 HETATM 14 C C13 RS5 . . . CA 5 105.171 70.618 -11.296 1 129.55 ? C13 RS5 1101 E 1 HETATM 15 O O2 RS5 . . . CA 5 105.959 64.062 -7.361 1 129.03 ? O2 RS5 1101 E 1 HETATM 16 O O3 RS5 . . . CA 5 102.519 71.889 -9.433 1 119.38 ? O3 RS5 1101 E 1 HETATM 17 C C14 RS5 . . . CA 5 105.085 72.842 -10.731 1 126.95 ? C14 RS5 1101 E 1 HETATM 18 N N1 RS5 . . . CA 5 102.841 69.838 -10.103 1 120.49 ? N1 RS5 1101 E 1 HETATM 19 C C15 RS5 . . . CA 5 104.709 74.214 -10.17 1 120.4 ? C15 RS5 1101 E 1 HETATM 20 C C16 RS5 . . . CA 5 105.801 74.706 -9.159 1 120.02 ? C16 RS5 1101 E 1 HETATM 21 C C17 RS5 . . . CA 5 104.62 75.207 -11.28 1 119.19 ? C17 RS5 1101 E 1 HETATM 22 C C18 RS5 . . . CA 5 107.246 70.768 -12.451 1 138.77 ? C18 RS5 1101 E 1 HETATM 23 C C19 RS5 . . . CA 5 107.53 71.071 -13.731 1 141.89 ? C19 RS5 1101 E 1 HETATM 24 C C20 RS5 . . . CA 5 108.607 70.509 -14.389 1 140.44 ? C20 RS5 1101 E 1 HETATM 25 C C21 RS5 . . . CA 5 109.458 69.633 -13.74 1 141.24 ? C21 RS5 1101 E 1 HETATM 26 N N4 RS5 . . . CA 5 106.116 72.53 -11.413 1 129.94 ? N4 RS5 1101 E 1 HETATM 27 N N2 RS5 . . . CA 5 104.8 69.37 -11.385 1 129.09 ? N2 RS5 1101 E 1 HETATM 28 C C22 RS5 . . . CA 5 109.224 69.317 -12.414 1 140.8 ? C22 RS5 1101 E 1 HETATM 29 C C23 RS5 . . . CA 5 108.138 69.875 -11.75 1 141.64 ? C23 RS5 1101 E 1 HETATM 30 N N3 RS5 . . . CA 5 106.115 71.342 -11.71 1 131.79 ? N3 RS5 1101 E 1 HETATM 31 CL CL1 RS5 . . . CA 5 106.471 72.19 -14.614 1 204.3 ? CL1 RS5 1101 E 1 HETATM 32 CL CL2 RS5 . . . CA 5 107.884 69.436 -10.031 1 188.07 ? CL2 RS5 1101 E 1 HETATM 33 H H3 RS5 . . . CA 5 106.721 63.232 -4.885 0 154.87 ? H3 RS5 1101 E 1 HETATM 34 H H2 RS5 . . . CA 5 106.798 62.154 -6.042 0 154.87 ? H2 RS5 1101 E 1 HETATM 35 H H4 RS5 . . . CA 5 104.541 62.927 -6.661 0 154.17 ? H4 RS5 1101 E 1 HETATM 36 H H5 RS5 . . . CA 5 104.857 64.193 -5.762 0 154.17 ? H5 RS5 1101 E 1 HETATM 37 H H6 RS5 . . . CA 5 103.482 64.935 -7.183 0 151.63 ? H6 RS5 1101 E 1 HETATM 38 H H7 RS5 . . . CA 5 102.348 66.355 -8.634 0 149.89 ? H7 RS5 1101 E 1 HETATM 39 H H1 RS5 . . . CA 5 105.914 61.436 -4.08 0 161.05 ? H1 RS5 1101 E 1 HETATM 40 H H8 RS5 . . . CA 5 105.604 66.538 -10.966 0 159.41 ? H8 RS5 1101 E 1 HETATM 41 H H9 RS5 . . . CA 5 106.738 65.145 -9.514 0 162.49 ? H9 RS5 1101 E 1 HETATM 42 H H11 RS5 . . . CA 5 103.484 67.192 -11.813 0 148.16 ? H11 RS5 1101 E 1 HETATM 43 H H10 RS5 . . . CA 5 102.279 67.429 -10.813 0 148.16 ? H10 RS5 1101 E 1 HETATM 44 H H13 RS5 . . . CA 5 103.854 74.135 -9.719 0 144.48 ? H13 RS5 1101 E 1 HETATM 45 H H14 RS5 . . . CA 5 105.739 74.189 -8.34 0 144.03 ? H14 RS5 1101 E 1 HETATM 46 H H15 RS5 . . . CA 5 106.681 74.589 -9.55 0 144.03 ? H15 RS5 1101 E 1 HETATM 47 H H16 RS5 . . . CA 5 105.658 75.645 -8.96 0 144.03 ? H16 RS5 1101 E 1 HETATM 48 H H17 RS5 . . . CA 5 104.658 76.104 -10.915 0 143.03 ? H17 RS5 1101 E 1 HETATM 49 H H19 RS5 . . . CA 5 105.361 75.075 -11.892 0 143.03 ? H19 RS5 1101 E 1 HETATM 50 H H18 RS5 . . . CA 5 103.783 75.086 -11.755 0 143.03 ? H18 RS5 1101 E 1 HETATM 51 H H20 RS5 . . . CA 5 108.762 70.723 -15.281 0 168.52 ? H20 RS5 1101 E 1 HETATM 52 H H21 RS5 . . . CA 5 110.18 69.261 -14.191 0 169.49 ? H21 RS5 1101 E 1 HETATM 53 H H22 RS5 . . . CA 5 109.792 68.731 -11.968 0 168.96 ? H22 RS5 1101 E 1 HETATM 54 H H12 RS5 . . . CA 5 106.5 73.129 -11.948 0 155.92 ? H12 RS5 1101 E 1 # _model_server_stats.io_time_ms 105 _model_server_stats.parse_time_ms 37 _model_server_stats.create_model_time_ms 67 _model_server_stats.query_time_ms 253 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 54 #