data_8BU7 # _model_server_result.job_id edOuSr23b_KgBhjtg_l6dA _model_server_result.datetime_utc '2024-12-01 19:36:35' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8bu7 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"IA","auth_seq_id":1201}' # _entry.id 8BU7 # _exptl.entry_id 8BU7 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 473.352 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1-[2,6-bis(chloranyl)phenyl]-6-[[4-(2-hydroxyethyloxy)phenyl]methyl]-3-propan-2-yl-5H-pyrazolo[3,4-d]pyrimidin-4-one _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 8BU7 _cell.length_a 248.683 _cell.length_b 248.683 _cell.length_c 218.597 _cell.Z_PDB 18 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8BU7 _symmetry.cell_setting ? _symmetry.Int_Tables_number 152 _symmetry.space_group_name_Hall 'P 31 2"' _symmetry.space_group_name_H-M 'P 31 2 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? trimeric 3 author_defined_assembly 1 ? trimeric 3 author_defined_assembly 2 ? trimeric 3 author_defined_assembly 3 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,C,J,K,L,M,N,O,P,Q,R,S,T,U 1 1 D,E,F,V,W,X,Y,Z,AA,BA,CA,DA,EA,FA,GA,HA 2 1 G,H,I,IA,JA,KA,LA,MA,NA,OA,PA,QA,RA,SA,TA 3 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 5 K N N ? 5 CA N N ? 5 IA N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 22 A CYS 18 1_555 A SG CYS 317 A CYS 313 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.052 ? covale ? covale1 B C TYR 184 B TYR 892 1_555 B N TPO 185 B TPO 893 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.34 ? covale ? covale2 B C TPO 185 B TPO 893 1_555 B N ASN 186 B ASN 894 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale3 E C TYR 184 E TYR 892 1_555 E N TPO 185 E TPO 893 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.325 ? covale ? covale4 E C TPO 185 E TPO 893 1_555 E N ASN 186 E ASN 894 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? covale ? covale5 H C TYR 184 H TYR 892 1_555 H N TPO 185 H TPO 893 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.325 ? covale ? covale6 H C TPO 185 H TPO 893 1_555 H N ASN 186 H ASN 894 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.341 ? # _chem_comp.formula 'C23 H22 Cl2 N4 O3' _chem_comp.formula_weight 473.352 _chem_comp.id RS5 _chem_comp.mon_nstd_flag . _chem_comp.name 1-[2,6-bis(chloranyl)phenyl]-6-[[4-(2-hydroxyethyloxy)phenyl]methyl]-3-propan-2-yl-5H-pyrazolo[3,4-d]pyrimidin-4-one _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C17 C15 RS5 sing 284 n n C16 C15 RS5 sing 285 n n C15 C14 RS5 sing 286 n n C14 N4 RS5 doub 287 n y C14 C12 RS5 sing 288 n y O3 C11 RS5 doub 289 n n N4 N3 RS5 sing 290 n y CL1 C19 RS5 sing 291 n n C12 C11 RS5 sing 292 n n C12 C13 RS5 doub 293 n y C11 N1 RS5 sing 294 n n N3 C13 RS5 sing 295 n y N3 C18 RS5 sing 296 n n C19 C18 RS5 doub 297 n y C19 C20 RS5 sing 298 n y C13 N2 RS5 sing 299 n n C18 C23 RS5 sing 300 n y N1 C10 RS5 sing 301 n n C20 C21 RS5 doub 302 n y N2 C10 RS5 doub 303 n n C23 CL2 RS5 sing 304 n n C23 C22 RS5 doub 305 n y C10 C9 RS5 sing 306 n n C21 C22 RS5 sing 307 n y C9 C6 RS5 sing 308 n n C5 C6 RS5 doub 309 n y C5 C4 RS5 sing 310 n y C6 C7 RS5 sing 311 n y C4 C3 RS5 doub 312 n y C7 C8 RS5 doub 313 n y C3 C8 RS5 sing 314 n y C3 O2 RS5 sing 315 n n O2 C2 RS5 sing 316 n n C2 C1 RS5 sing 317 n n C1 O1 RS5 sing 318 n n C1 H3 RS5 sing 319 n n C1 H2 RS5 sing 320 n n C2 H4 RS5 sing 321 n n C2 H5 RS5 sing 322 n n C4 H6 RS5 sing 323 n n C5 H7 RS5 sing 324 n n O1 H1 RS5 sing 325 n n C7 H8 RS5 sing 326 n n C8 H9 RS5 sing 327 n n C9 H11 RS5 sing 328 n n C9 H10 RS5 sing 329 n n N1 H23 RS5 sing 330 n n C15 H13 RS5 sing 331 n n C16 H14 RS5 sing 332 n n C16 H15 RS5 sing 333 n n C16 H16 RS5 sing 334 n n C17 H17 RS5 sing 335 n n C17 H19 RS5 sing 336 n n C17 H18 RS5 sing 337 n n C20 H20 RS5 sing 338 n n C21 H21 RS5 sing 339 n n C22 H22 RS5 sing 340 n n # _atom_sites.entry_id 8BU7 _atom_sites.fract_transf_matrix[1][1] 0.004021 _atom_sites.fract_transf_matrix[1][2] 0.002322 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.004643 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.004575 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code J 4 EDO A 1 1201 1201 EDO EDO . K 5 RS5 A 1 1202 1101 RS5 195 . L 6 SO4 A 1 1203 3 SO4 SO4 . M 6 SO4 A 1 1204 5 SO4 SO4 . N 6 SO4 A 1 1205 6 SO4 SO4 . O 6 SO4 A 1 1206 10 SO4 SO4 . P 6 SO4 A 1 1207 11 SO4 SO4 . Q 6 SO4 A 1 1208 27 SO4 SO4 . R 6 SO4 C 1 301 4 SO4 SO4 . S 6 SO4 C 1 302 16 SO4 SO4 . T 6 SO4 C 1 303 22 SO4 SO4 . U 6 SO4 C 1 304 30 SO4 SO4 . V 4 EDO D 1 1201 1201 EDO EDO . W 6 SO4 D 1 1202 2 SO4 SO4 . X 6 SO4 D 1 1203 7 SO4 SO4 . Y 6 SO4 D 1 1204 9 SO4 SO4 . Z 6 SO4 D 1 1205 20 SO4 SO4 . AA 6 SO4 D 1 1206 25 SO4 SO4 . BA 6 SO4 D 1 1207 29 SO4 SO4 . CA 5 RS5 E 1 1101 1101 RS5 195 . DA 4 EDO F 1 301 301 EDO EDO . EA 6 SO4 F 1 302 17 SO4 SO4 . FA 6 SO4 F 1 303 21 SO4 SO4 . GA 6 SO4 F 1 304 26 SO4 SO4 . HA 6 SO4 F 1 305 31 SO4 SO4 . IA 5 RS5 G 1 1201 1101 RS5 195 . JA 6 SO4 G 1 1202 1 SO4 SO4 . KA 6 SO4 G 1 1203 8 SO4 SO4 . LA 6 SO4 G 1 1204 13 SO4 SO4 . MA 6 SO4 G 1 1205 14 SO4 SO4 . NA 6 SO4 G 1 1206 15 SO4 SO4 . OA 6 SO4 G 1 1207 19 SO4 SO4 . PA 6 SO4 G 1 1208 28 SO4 SO4 . QA 6 SO4 H 1 1101 33 SO4 SO4 . RA 6 SO4 I 1 301 12 SO4 SO4 . SA 6 SO4 I 1 302 18 SO4 SO4 . TA 6 SO4 I 1 303 32 SO4 SO4 . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 RS5 . . . IA 5 84.546 104.734 46.572 1 120.07 ? C1 RS5 1201 G 1 HETATM 2 C C2 RS5 . . . IA 5 83.429 105.228 45.651 1 119.56 ? C2 RS5 1201 G 1 HETATM 3 C C3 RS5 . . . IA 5 81.585 106.751 45.648 1 120.22 ? C3 RS5 1201 G 1 HETATM 4 C C4 RS5 . . . IA 5 81.083 106.212 44.468 1 120.59 ? C4 RS5 1201 G 1 HETATM 5 C C5 RS5 . . . IA 5 79.898 106.696 43.919 1 120.88 ? C5 RS5 1201 G 1 HETATM 6 C C6 RS5 . . . IA 5 79.224 107.745 44.545 1 123.7 ? C6 RS5 1201 G 1 HETATM 7 O O1 RS5 . . . IA 5 85.439 103.968 45.807 1 129.65 ? O1 RS5 1201 G 1 HETATM 8 C C7 RS5 . . . IA 5 79.732 108.269 45.722 1 130.23 ? C7 RS5 1201 G 1 HETATM 9 C C8 RS5 . . . IA 5 80.903 107.78 46.269 1 124.08 ? C8 RS5 1201 G 1 HETATM 10 C C9 RS5 . . . IA 5 77.902 108.41 44.033 1 122.53 ? C9 RS5 1201 G 1 HETATM 11 C C10 RS5 . . . IA 5 76.694 107.918 44.817 1 121.96 ? C10 RS5 1201 G 1 HETATM 12 C C11 RS5 . . . IA 5 74.762 106.583 45.002 1 119.3 ? C11 RS5 1201 G 1 HETATM 13 C C12 RS5 . . . IA 5 74.523 107.12 46.204 1 122.82 ? C12 RS5 1201 G 1 HETATM 14 C C13 RS5 . . . IA 5 75.399 108.124 46.723 1 126.4 ? C13 RS5 1201 G 1 HETATM 15 O O2 RS5 . . . IA 5 82.77 106.298 46.257 1 122.41 ? O2 RS5 1201 G 1 HETATM 16 O O3 RS5 . . . IA 5 74.029 105.761 44.566 1 117.44 ? O3 RS5 1201 G 1 HETATM 17 C C14 RS5 . . . IA 5 73.496 106.978 47.289 1 123.59 ? C14 RS5 1201 G 1 HETATM 18 N N1 RS5 . . . IA 5 75.827 106.975 44.292 1 119.62 ? N1 RS5 1201 G 1 HETATM 19 C C15 RS5 . . . IA 5 72.256 106.083 47.334 1 116.53 ? C15 RS5 1201 G 1 HETATM 20 C C16 RS5 . . . IA 5 71.016 107.011 47.027 1 116.23 ? C16 RS5 1201 G 1 HETATM 21 C C17 RS5 . . . IA 5 72.094 105.499 48.697 1 113.41 ? C17 RS5 1201 G 1 HETATM 22 C C18 RS5 . . . IA 5 75.491 109.399 48.716 1 135.14 ? C18 RS5 1201 G 1 HETATM 23 C C19 RS5 . . . IA 5 74.791 110.613 49.038 1 138.33 ? C19 RS5 1201 G 1 HETATM 24 C C20 RS5 . . . IA 5 75.389 111.546 49.878 1 136.32 ? C20 RS5 1201 G 1 HETATM 25 C C21 RS5 . . . IA 5 76.658 111.308 50.373 1 136.86 ? C21 RS5 1201 G 1 HETATM 26 N N4 RS5 . . . IA 5 73.874 107.808 48.181 1 127.22 ? N4 RS5 1201 G 1 HETATM 27 N N2 RS5 . . . IA 5 76.433 108.5 46.027 1 125.51 ? N2 RS5 1201 G 1 HETATM 28 C C22 RS5 . . . IA 5 77.32 110.143 50.026 1 136.66 ? C22 RS5 1201 G 1 HETATM 29 C C23 RS5 . . . IA 5 76.724 109.214 49.198 1 135.82 ? C23 RS5 1201 G 1 HETATM 30 N N3 RS5 . . . IA 5 74.901 108.386 47.841 1 128.78 ? N3 RS5 1201 G 1 HETATM 31 CL CL1 RS5 . . . IA 5 73.147 110.972 48.428 1 202.36 ? CL1 RS5 1201 G 1 HETATM 32 CL CL2 RS5 . . . IA 5 77.581 107.72 48.755 1 172.18 ? CL2 RS5 1201 G 1 HETATM 33 H H3 RS5 . . . IA 5 85.012 105.492 46.959 0 144.08 ? H3 RS5 1201 G 1 HETATM 34 H H2 RS5 . . . IA 5 84.17 104.19 47.281 0 144.08 ? H2 RS5 1201 G 1 HETATM 35 H H4 RS5 . . . IA 5 83.81 105.518 44.807 0 143.47 ? H4 RS5 1201 G 1 HETATM 36 H H5 RS5 . . . IA 5 82.8 104.508 45.491 0 143.47 ? H5 RS5 1201 G 1 HETATM 37 H H6 RS5 . . . IA 5 81.542 105.523 44.042 0 144.71 ? H6 RS5 1201 G 1 HETATM 38 H H7 RS5 . . . IA 5 79.557 106.321 43.139 0 145.05 ? H7 RS5 1201 G 1 HETATM 39 H H1 RS5 . . . IA 5 86.041 103.646 46.311 0 155.58 ? H1 RS5 1201 G 1 HETATM 40 H H8 RS5 . . . IA 5 79.279 108.96 46.15 0 156.27 ? H8 RS5 1201 G 1 HETATM 41 H H9 RS5 . . . IA 5 81.234 108.144 47.058 0 148.9 ? H9 RS5 1201 G 1 HETATM 42 H H11 RS5 . . . IA 5 77.781 108.19 43.096 0 147.04 ? H11 RS5 1201 G 1 HETATM 43 H H10 RS5 . . . IA 5 77.973 109.372 44.133 0 147.04 ? H10 RS5 1201 G 1 HETATM 44 H H13 RS5 . . . IA 5 72.332 105.358 46.694 0 139.83 ? H13 RS5 1201 G 1 HETATM 45 H H14 RS5 . . . IA 5 70.907 107.653 47.746 0 139.47 ? H14 RS5 1201 G 1 HETATM 46 H H15 RS5 . . . IA 5 71.164 107.482 46.192 0 139.47 ? H15 RS5 1201 G 1 HETATM 47 H H16 RS5 . . . IA 5 70.216 106.468 46.955 0 139.47 ? H16 RS5 1201 G 1 HETATM 48 H H17 RS5 . . . IA 5 71.744 106.174 49.299 0 136.1 ? H17 RS5 1201 G 1 HETATM 49 H H19 RS5 . . . IA 5 71.479 104.75 48.657 0 136.1 ? H19 RS5 1201 G 1 HETATM 50 H H18 RS5 . . . IA 5 72.955 105.192 49.021 0 136.1 ? H18 RS5 1201 G 1 HETATM 51 H H20 RS5 . . . IA 5 74.938 112.327 50.105 0 163.58 ? H20 RS5 1201 G 1 HETATM 52 H H21 RS5 . . . IA 5 77.065 111.927 50.935 0 164.24 ? H21 RS5 1201 G 1 HETATM 53 H H22 RS5 . . . IA 5 78.175 109.984 50.355 0 163.99 ? H22 RS5 1201 G 1 HETATM 54 H H12 RS5 . . . IA 5 73.7 107.66 49.041 0 152.66 ? H12 RS5 1201 G 1 # _model_server_stats.io_time_ms 136 _model_server_stats.parse_time_ms 29 _model_server_stats.create_model_time_ms 74 _model_server_stats.query_time_ms 280 _model_server_stats.encode_time_ms 7 _model_server_stats.element_count 54 #