data_8BU7 # _model_server_result.job_id 1Gnbfo38cPR4e4uPPV4Dgg _model_server_result.datetime_utc '2024-11-07 00:35:02' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8bu7 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"K","auth_seq_id":1202}' # _entry.id 8BU7 # _exptl.entry_id 8BU7 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 473.352 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1-[2,6-bis(chloranyl)phenyl]-6-[[4-(2-hydroxyethyloxy)phenyl]methyl]-3-propan-2-yl-5H-pyrazolo[3,4-d]pyrimidin-4-one _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 8BU7 _cell.length_a 248.683 _cell.length_b 248.683 _cell.length_c 218.597 _cell.Z_PDB 18 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8BU7 _symmetry.cell_setting ? _symmetry.Int_Tables_number 152 _symmetry.space_group_name_Hall 'P 31 2"' _symmetry.space_group_name_H-M 'P 31 2 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? trimeric 3 author_defined_assembly 1 ? trimeric 3 author_defined_assembly 2 ? trimeric 3 author_defined_assembly 3 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,C,J,K,L,M,N,O,P,Q,R,S,T,U 1 1 D,E,F,V,W,X,Y,Z,AA,BA,CA,DA,EA,FA,GA,HA 2 1 G,H,I,IA,JA,KA,LA,MA,NA,OA,PA,QA,RA,SA,TA 3 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 5 K N N ? 5 CA N N ? 5 IA N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 22 A CYS 18 1_555 A SG CYS 317 A CYS 313 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.052 ? covale ? covale1 B C TYR 184 B TYR 892 1_555 B N TPO 185 B TPO 893 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.34 ? covale ? covale2 B C TPO 185 B TPO 893 1_555 B N ASN 186 B ASN 894 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale3 E C TYR 184 E TYR 892 1_555 E N TPO 185 E TPO 893 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.325 ? covale ? covale4 E C TPO 185 E TPO 893 1_555 E N ASN 186 E ASN 894 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? covale ? covale5 H C TYR 184 H TYR 892 1_555 H N TPO 185 H TPO 893 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.325 ? covale ? covale6 H C TPO 185 H TPO 893 1_555 H N ASN 186 H ASN 894 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.341 ? # _chem_comp.formula 'C23 H22 Cl2 N4 O3' _chem_comp.formula_weight 473.352 _chem_comp.id RS5 _chem_comp.mon_nstd_flag . _chem_comp.name 1-[2,6-bis(chloranyl)phenyl]-6-[[4-(2-hydroxyethyloxy)phenyl]methyl]-3-propan-2-yl-5H-pyrazolo[3,4-d]pyrimidin-4-one _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C17 C15 RS5 sing 284 n n C16 C15 RS5 sing 285 n n C15 C14 RS5 sing 286 n n C14 N4 RS5 doub 287 n y C14 C12 RS5 sing 288 n y O3 C11 RS5 doub 289 n n N4 N3 RS5 sing 290 n y CL1 C19 RS5 sing 291 n n C12 C11 RS5 sing 292 n n C12 C13 RS5 doub 293 n y C11 N1 RS5 sing 294 n n N3 C13 RS5 sing 295 n y N3 C18 RS5 sing 296 n n C19 C18 RS5 doub 297 n y C19 C20 RS5 sing 298 n y C13 N2 RS5 sing 299 n n C18 C23 RS5 sing 300 n y N1 C10 RS5 sing 301 n n C20 C21 RS5 doub 302 n y N2 C10 RS5 doub 303 n n C23 CL2 RS5 sing 304 n n C23 C22 RS5 doub 305 n y C10 C9 RS5 sing 306 n n C21 C22 RS5 sing 307 n y C9 C6 RS5 sing 308 n n C5 C6 RS5 doub 309 n y C5 C4 RS5 sing 310 n y C6 C7 RS5 sing 311 n y C4 C3 RS5 doub 312 n y C7 C8 RS5 doub 313 n y C3 C8 RS5 sing 314 n y C3 O2 RS5 sing 315 n n O2 C2 RS5 sing 316 n n C2 C1 RS5 sing 317 n n C1 O1 RS5 sing 318 n n C1 H3 RS5 sing 319 n n C1 H2 RS5 sing 320 n n C2 H4 RS5 sing 321 n n C2 H5 RS5 sing 322 n n C4 H6 RS5 sing 323 n n C5 H7 RS5 sing 324 n n O1 H1 RS5 sing 325 n n C7 H8 RS5 sing 326 n n C8 H9 RS5 sing 327 n n C9 H11 RS5 sing 328 n n C9 H10 RS5 sing 329 n n N1 H23 RS5 sing 330 n n C15 H13 RS5 sing 331 n n C16 H14 RS5 sing 332 n n C16 H15 RS5 sing 333 n n C16 H16 RS5 sing 334 n n C17 H17 RS5 sing 335 n n C17 H19 RS5 sing 336 n n C17 H18 RS5 sing 337 n n C20 H20 RS5 sing 338 n n C21 H21 RS5 sing 339 n n C22 H22 RS5 sing 340 n n # _atom_sites.entry_id 8BU7 _atom_sites.fract_transf_matrix[1][1] 0.004021 _atom_sites.fract_transf_matrix[1][2] 0.002322 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.004643 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.004575 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code J 4 EDO A 1 1201 1201 EDO EDO . K 5 RS5 A 1 1202 1101 RS5 195 . L 6 SO4 A 1 1203 3 SO4 SO4 . M 6 SO4 A 1 1204 5 SO4 SO4 . N 6 SO4 A 1 1205 6 SO4 SO4 . O 6 SO4 A 1 1206 10 SO4 SO4 . P 6 SO4 A 1 1207 11 SO4 SO4 . Q 6 SO4 A 1 1208 27 SO4 SO4 . R 6 SO4 C 1 301 4 SO4 SO4 . S 6 SO4 C 1 302 16 SO4 SO4 . T 6 SO4 C 1 303 22 SO4 SO4 . U 6 SO4 C 1 304 30 SO4 SO4 . V 4 EDO D 1 1201 1201 EDO EDO . W 6 SO4 D 1 1202 2 SO4 SO4 . X 6 SO4 D 1 1203 7 SO4 SO4 . Y 6 SO4 D 1 1204 9 SO4 SO4 . Z 6 SO4 D 1 1205 20 SO4 SO4 . AA 6 SO4 D 1 1206 25 SO4 SO4 . BA 6 SO4 D 1 1207 29 SO4 SO4 . CA 5 RS5 E 1 1101 1101 RS5 195 . DA 4 EDO F 1 301 301 EDO EDO . EA 6 SO4 F 1 302 17 SO4 SO4 . FA 6 SO4 F 1 303 21 SO4 SO4 . GA 6 SO4 F 1 304 26 SO4 SO4 . HA 6 SO4 F 1 305 31 SO4 SO4 . IA 5 RS5 G 1 1201 1101 RS5 195 . JA 6 SO4 G 1 1202 1 SO4 SO4 . KA 6 SO4 G 1 1203 8 SO4 SO4 . LA 6 SO4 G 1 1204 13 SO4 SO4 . MA 6 SO4 G 1 1205 14 SO4 SO4 . NA 6 SO4 G 1 1206 15 SO4 SO4 . OA 6 SO4 G 1 1207 19 SO4 SO4 . PA 6 SO4 G 1 1208 28 SO4 SO4 . QA 6 SO4 H 1 1101 33 SO4 SO4 . RA 6 SO4 I 1 301 12 SO4 SO4 . SA 6 SO4 I 1 302 18 SO4 SO4 . TA 6 SO4 I 1 303 32 SO4 SO4 . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 RS5 . . . K 5 56.287 44.302 38.473 1 124.33 ? C1 RS5 1202 A 1 HETATM 2 C C2 RS5 . . . K 5 55.498 43.598 37.363 1 125.24 ? C2 RS5 1202 A 1 HETATM 3 C C3 RS5 . . . K 5 53.779 44.227 35.796 1 125.49 ? C3 RS5 1202 A 1 HETATM 4 C C4 RS5 . . . K 5 53.363 45.157 34.862 1 124.27 ? C4 RS5 1202 A 1 HETATM 5 C C5 RS5 . . . K 5 52.301 44.872 34.026 1 125.34 ? C5 RS5 1202 A 1 HETATM 6 C C6 RS5 . . . K 5 51.663 43.641 34.073 1 126.5 ? C6 RS5 1202 A 1 HETATM 7 O O1 RS5 . . . K 5 57.277 43.439 38.959 1 131.05 ? O1 RS5 1202 A 1 HETATM 8 C C7 RS5 . . . K 5 52.06 42.712 35.027 1 127.16 ? C7 RS5 1202 A 1 HETATM 9 C C8 RS5 . . . K 5 53.125 43.002 35.878 1 126.53 ? C8 RS5 1202 A 1 HETATM 10 C C9 RS5 . . . K 5 50.458 43.493 33.088 1 127.56 ? C9 RS5 1202 A 1 HETATM 11 C C10 RS5 . . . K 5 50.845 42.812 31.769 1 127.37 ? C10 RS5 1202 A 1 HETATM 12 C C11 RS5 . . . K 5 51.785 43.067 29.607 1 124.71 ? C11 RS5 1202 A 1 HETATM 13 C C12 RS5 . . . K 5 51.631 41.758 29.404 1 128.16 ? C12 RS5 1202 A 1 HETATM 14 C C13 RS5 . . . K 5 51.062 40.955 30.442 1 131.78 ? C13 RS5 1202 A 1 HETATM 15 O O2 RS5 . . . K 5 54.852 44.59 36.624 1 125.5 ? O2 RS5 1202 A 1 HETATM 16 O O3 RS5 . . . K 5 52.252 43.75 28.759 1 123.38 ? O3 RS5 1202 A 1 HETATM 17 C C14 RS5 . . . K 5 51.9 40.762 28.309 1 128.42 ? C14 RS5 1202 A 1 HETATM 18 N N1 RS5 . . . K 5 51.408 43.602 30.774 1 125.29 ? N1 RS5 1202 A 1 HETATM 19 C C15 RS5 . . . K 5 52.481 40.981 26.912 1 121.39 ? C15 RS5 1202 A 1 HETATM 20 C C16 RS5 . . . K 5 53.403 39.86 26.562 1 117.19 ? C16 RS5 1202 A 1 HETATM 21 C C17 RS5 . . . K 5 51.286 40.949 25.884 1 121.22 ? C17 RS5 1202 A 1 HETATM 22 C C18 RS5 . . . K 5 50.518 38.71 30.715 1 141.61 ? C18 RS5 1202 A 1 HETATM 23 C C19 RS5 . . . K 5 49.285 38.105 30.271 1 147.02 ? C19 RS5 1202 A 1 HETATM 24 C C20 RS5 . . . K 5 48.737 37.057 30.998 1 146.79 ? C20 RS5 1202 A 1 HETATM 25 C C21 RS5 . . . K 5 49.357 36.633 32.158 1 147.13 ? C21 RS5 1202 A 1 HETATM 26 N N4 RS5 . . . K 5 51.495 39.66 28.806 1 132.05 ? N4 RS5 1202 A 1 HETATM 27 N N2 RS5 . . . K 5 50.717 41.469 31.584 1 131.52 ? N2 RS5 1202 A 1 HETATM 28 C C22 RS5 . . . K 5 50.517 37.252 32.587 1 145.28 ? C22 RS5 1202 A 1 HETATM 29 C C23 RS5 . . . K 5 51.07 38.293 31.869 1 143.94 ? C23 RS5 1202 A 1 HETATM 30 N N3 RS5 . . . K 5 51.072 39.819 29.946 1 134.65 ? N3 RS5 1202 A 1 HETATM 31 CL CL1 RS5 . . . K 5 48.434 38.605 28.774 1 208.72 ? CL1 RS5 1202 A 1 HETATM 32 CL CL2 RS5 . . . K 5 52.562 39.059 32.46 1 175.94 ? CL2 RS5 1202 A 1 HETATM 33 H H3 RS5 . . . K 5 55.685 44.542 39.195 0 149.19 ? H3 RS5 1202 A 1 HETATM 34 H H2 RS5 . . . K 5 56.701 45.103 38.117 0 149.19 ? H2 RS5 1202 A 1 HETATM 35 H H4 RS5 . . . K 5 54.846 42.994 37.75 0 150.29 ? H4 RS5 1202 A 1 HETATM 36 H H5 RS5 . . . K 5 56.102 43.099 36.792 0 150.29 ? H5 RS5 1202 A 1 HETATM 37 H H6 RS5 . . . K 5 53.799 45.976 34.796 0 149.12 ? H6 RS5 1202 A 1 HETATM 38 H H7 RS5 . . . K 5 52.008 45.516 33.423 0 150.41 ? H7 RS5 1202 A 1 HETATM 39 H H1 RS5 . . . K 5 57.987 43.882 39.098 0 157.26 ? H1 RS5 1202 A 1 HETATM 40 H H8 RS5 . . . K 5 51.616 41.898 35.098 0 152.59 ? H8 RS5 1202 A 1 HETATM 41 H H9 RS5 . . . K 5 53.401 42.372 36.504 0 151.84 ? H9 RS5 1202 A 1 HETATM 42 H H11 RS5 . . . K 5 49.769 42.964 33.519 0 153.07 ? H11 RS5 1202 A 1 HETATM 43 H H10 RS5 . . . K 5 50.111 44.377 32.889 0 153.07 ? H10 RS5 1202 A 1 HETATM 44 H H13 RS5 . . . K 5 52.961 41.824 26.887 0 145.67 ? H13 RS5 1202 A 1 HETATM 45 H H14 RS5 . . . K 5 53.253 39.594 25.641 0 140.62 ? H14 RS5 1202 A 1 HETATM 46 H H15 RS5 . . . K 5 53.232 39.106 27.148 0 140.62 ? H15 RS5 1202 A 1 HETATM 47 H H16 RS5 . . . K 5 54.322 40.151 26.669 0 140.62 ? H16 RS5 1202 A 1 HETATM 48 H H17 RS5 . . . K 5 50.776 40.133 26.006 0 145.47 ? H17 RS5 1202 A 1 HETATM 49 H H19 RS5 . . . K 5 51.637 40.978 24.98 0 145.47 ? H19 RS5 1202 A 1 HETATM 50 H H18 RS5 . . . K 5 50.711 41.715 26.032 0 145.47 ? H18 RS5 1202 A 1 HETATM 51 H H20 RS5 . . . K 5 47.956 36.643 30.707 0 176.14 ? H20 RS5 1202 A 1 HETATM 52 H H21 RS5 . . . K 5 48.995 35.932 32.649 0 176.56 ? H21 RS5 1202 A 1 HETATM 53 H H22 RS5 . . . K 5 50.929 36.963 33.369 0 174.33 ? H22 RS5 1202 A 1 HETATM 54 H H12 RS5 . . . K 5 51.868 38.889 28.563 0 158.46 ? H12 RS5 1202 A 1 # _model_server_stats.io_time_ms 131 _model_server_stats.parse_time_ms 27 _model_server_stats.create_model_time_ms 62 _model_server_stats.query_time_ms 314 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 54 #