data_8BUA # _model_server_result.job_id YHqF6rduWfG3j0-DOreYJA _model_server_result.datetime_utc '2024-11-08 11:59:37' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8bua # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"J","auth_seq_id":1201}' # _entry.id 8BUA # _exptl.entry_id 8BUA _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 192.124 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CITRIC ACID' _entity.pdbx_number_of_molecules 9 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 8BUA _cell.length_a 250.329 _cell.length_b 250.329 _cell.length_c 217.561 _cell.Z_PDB 18 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8BUA _symmetry.cell_setting ? _symmetry.Int_Tables_number 152 _symmetry.space_group_name_Hall 'P 31 2"' _symmetry.space_group_name_H-M 'P 31 2 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? trimeric 3 author_defined_assembly 1 ? trimeric 3 author_defined_assembly 2 ? trimeric 3 author_defined_assembly 3 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,C,J,K,L 1 1 D,E,F,M,N,O,P 2 1 G,H,I,Q,R,S,T,U 3 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 J N N ? 4 L N N ? 4 M N N ? 4 O N N ? 4 P N N ? 4 Q N N ? 4 S N N ? 4 T N N ? 4 U N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 22 A CYS 18 1_555 A SG CYS 317 A CYS 313 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.053 ? covale ? covale1 B C TYR 184 B TYR 892 1_555 B N TPO 185 B TPO 893 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.341 ? covale ? covale2 B C TPO 185 B TPO 893 1_555 B N ASN 186 B ASN 894 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.335 ? covale ? covale3 E C TYR 184 E TYR 892 1_555 E N TPO 185 E TPO 893 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.337 ? covale ? covale4 E C TPO 185 E TPO 893 1_555 E N ASN 186 E ASN 894 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.335 ? covale ? covale5 H C TYR 184 H TYR 892 1_555 H N TPO 185 H TPO 893 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.327 ? covale ? covale6 H C TPO 185 H TPO 893 1_555 H N ASN 186 H ASN 894 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.34 ? # _chem_comp.formula 'C6 H8 O7' _chem_comp.formula_weight 192.124 _chem_comp.id CIT _chem_comp.mon_nstd_flag . _chem_comp.name 'CITRIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 CIT doub 70 n n C1 O2 CIT sing 71 n n C1 C2 CIT sing 72 n n O2 HO2 CIT sing 73 n n C2 C3 CIT sing 74 n n C2 H21 CIT sing 75 n n C2 H22 CIT sing 76 n n C3 O7 CIT sing 77 n n C3 C4 CIT sing 78 n n C3 C6 CIT sing 79 n n O7 HO7 CIT sing 80 n n C4 C5 CIT sing 81 n n C4 H41 CIT sing 82 n n C4 H42 CIT sing 83 n n C5 O3 CIT doub 84 n n C5 O4 CIT sing 85 n n O4 HO4 CIT sing 86 n n C6 O5 CIT doub 87 n n C6 O6 CIT sing 88 n n O6 HO6 CIT sing 89 n n # _atom_sites.entry_id 8BUA _atom_sites.fract_transf_matrix[1][1] 0.003995 _atom_sites.fract_transf_matrix[1][2] 0.002306 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.004613 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.004596 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code J 4 CIT A 1 1201 1201 CIT CIT . K 5 RVH B 1 1101 1101 RVH 919 . L 4 CIT C 1 301 301 CIT CIT . M 4 CIT D 1 1201 1201 CIT CIT . N 5 RVH E 1 1101 1101 RVH 919 . O 4 CIT F 1 301 301 CIT CIT . P 4 CIT F 1 302 302 CIT CIT . Q 4 CIT G 1 1201 1201 CIT CIT . R 5 RVH H 1 1101 1101 RVH 919 . S 4 CIT H 1 1102 1102 CIT CIT . T 4 CIT I 1 301 301 CIT CIT . U 4 CIT I 1 302 302 CIT CIT . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 CIT . . . J 4 -59.951 -9.417 35.069 1 117.38 ? C1 CIT 1201 A 1 HETATM 2 O O1 CIT . . . J 4 -58.918 -10.084 35.281 1 117.13 ? O1 CIT 1201 A 1 HETATM 3 O O2 CIT . . . J 4 -59.965 -8.204 35.328 1 117.34 ? O2 CIT 1201 A 1 HETATM 4 C C2 CIT . . . J 4 -61.148 -10.191 34.575 1 116.87 ? C2 CIT 1201 A 1 HETATM 5 C C3 CIT . . . J 4 -61.383 -10.116 33.057 1 116.94 ? C3 CIT 1201 A 1 HETATM 6 O O7 CIT . . . J 4 -60.107 -10.489 32.442 1 116.74 ? O7 CIT 1201 A 1 HETATM 7 C C4 CIT . . . J 4 -62.441 -11.142 32.627 1 116.2 ? C4 CIT 1201 A 1 HETATM 8 C C5 CIT . . . J 4 -61.841 -12.219 31.75 1 115.5 ? C5 CIT 1201 A 1 HETATM 9 O O3 CIT . . . J 4 -61.49 -11.942 30.582 1 115.85 ? O3 CIT 1201 A 1 HETATM 10 O O4 CIT . . . J 4 -61.745 -13.393 32.146 1 117.8 ? O4 CIT 1201 A 1 HETATM 11 C C6 CIT . . . J 4 -61.716 -8.734 32.578 1 118.1 ? C6 CIT 1201 A 1 HETATM 12 O O5 CIT . . . J 4 -61.233 -8.277 31.516 1 116.79 ? O5 CIT 1201 A 1 HETATM 13 O O6 CIT . . . J 4 -62.499 -7.999 33.235 1 118.35 ? O6 CIT 1201 A 1 HETATM 14 H H21 CIT . . . J 4 -61.023 -11.237 34.854 0 140.24 ? H21 CIT 1201 A 1 HETATM 15 H H22 CIT . . . J 4 -62.037 -9.813 35.081 0 140.24 ? H22 CIT 1201 A 1 HETATM 16 H HO7 CIT . . . J 4 -59.792 -9.756 31.873 0 140.09 ? HO7 CIT 1201 A 1 HETATM 17 H H41 CIT . . . J 4 -63.237 -10.634 32.083 0 139.43 ? H41 CIT 1201 A 1 HETATM 18 H H42 CIT . . . J 4 -62.881 -11.6 33.513 0 139.43 ? H42 CIT 1201 A 1 # _model_server_stats.io_time_ms 142 _model_server_stats.parse_time_ms 30 _model_server_stats.create_model_time_ms 149 _model_server_stats.query_time_ms 539 _model_server_stats.encode_time_ms 6 _model_server_stats.element_count 18 #