data_8BUF
#
_model_server_result.job_id            X7KRs-bxRD52g-1BOY7B-g 
_model_server_result.datetime_utc      '2024-11-29 15:28:24' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          8buf 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"XA","auth_seq_id":1101}' 
#
_entry.id    8BUF 
#
_exptl.entry_id    8BUF 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              357.427 
_entity.id                          5 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            2-(6,7-dihydro-4~{H}-thieno[3,2-c]pyridin-5-ylmethyl)-6,7-dimethoxy-3~{H}-quinazolin-4-one 
_entity.pdbx_number_of_molecules    3 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            8BUF 
_cell.length_a            249.618 
_cell.length_b            249.618 
_cell.length_c            220.667 
_cell.Z_PDB               18 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 8BUF 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        152 
_symmetry.space_group_name_Hall    'P 31 2"' 
_symmetry.space_group_name_H-M     'P 31 2 1' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
? trimeric 3 author_defined_assembly 1 
? trimeric 3 author_defined_assembly 2 
? trimeric 3 author_defined_assembly 3 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,B,C,J,K,L,M,N,O,P,Q,R,S,T,U,V 1 1 
D,E,F,W,X,Y,Z,AA,BA,CA,DA,EA,FA,GA,HA,IA,JA,KA,LA,MA,NA 2 1 
G,H,I,OA,PA,QA,RA,SA,TA,UA,VA,WA,XA,YA,ZA,AB,BB,CB,DB,EB,FB 3 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 5 R N N 
? 5 FA N N 
? 5 XA N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 22 A CYS 18 1_555 A SG CYS 317 A CYS 313 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.045 ? 
covale ? covale1 B C TYR 184 B TYR 892 1_555 B N TPO 185 B TPO 893 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? 
covale ? covale2 B C TPO 185 B TPO 893 1_555 B N ASN 186 B ASN 894 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.337 ? 
covale ? covale3 E C TYR 184 E TYR 892 1_555 E N TPO 185 E TPO 893 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.337 ? 
covale ? covale4 E C TPO 185 E TPO 893 1_555 E N ASN 186 E ASN 894 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.333 ? 
covale ? covale5 H C TYR 184 H TYR 892 1_555 H N TPO 185 H TPO 893 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.322 ? 
covale ? covale6 H C TPO 185 H TPO 893 1_555 H N ASN 186 H ASN 894 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? 
#
_chem_comp.formula           'C18 H19 N3 O3 S' 
_chem_comp.formula_weight    357.427 
_chem_comp.id                RW6 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              2-(6,7-dihydro-4~{H}-thieno[3,2-c]pyridin-5-ylmethyl)-6,7-dimethoxy-3~{H}-quinazolin-4-one 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C10 O2 RW6 sing 275 n n 
O2 C8 RW6 sing 276 n n 
C8 C9 RW6 doub 277 n y 
C8 C7 RW6 sing 278 n y 
C9 C4 RW6 sing 279 n y 
O1 C2 RW6 doub 280 n n 
O3 C7 RW6 sing 281 n n 
O3 C11 RW6 sing 282 n n 
C7 C6 RW6 doub 283 n y 
C4 C2 RW6 sing 284 n n 
C4 C5 RW6 doub 285 n y 
C2 N1 RW6 sing 286 n n 
C6 C5 RW6 sing 287 n y 
C5 N2 RW6 sing 288 n n 
N1 C1 RW6 sing 289 n n 
N2 C1 RW6 doub 290 n n 
C1 C3 RW6 sing 291 n n 
C3 N3 RW6 sing 292 n n 
C13 N3 RW6 sing 293 n n 
C13 C12 RW6 sing 294 n n 
N3 C14 RW6 sing 295 n n 
C12 C15 RW6 sing 296 n n 
C14 C16 RW6 sing 297 n n 
C15 C16 RW6 doub 298 n y 
C15 S1 RW6 sing 299 n y 
C16 C17 RW6 sing 300 n y 
C17 C18 RW6 doub 301 n y 
S1 C18 RW6 sing 302 n y 
C13 H131 RW6 sing 303 n n 
C13 H132 RW6 sing 304 n n 
C14 H142 RW6 sing 305 n n 
C14 H141 RW6 sing 306 n n 
C17 H171 RW6 sing 307 n n 
C18 H181 RW6 sing 308 n n 
C12 H122 RW6 sing 309 n n 
C12 H121 RW6 sing 310 n n 
C6 H61 RW6 sing 311 n n 
C9 H91 RW6 sing 312 n n 
C3 H32 RW6 sing 313 n n 
C3 H31 RW6 sing 314 n n 
C10 H103 RW6 sing 315 n n 
C10 H102 RW6 sing 316 n n 
C10 H101 RW6 sing 317 n n 
C11 H112 RW6 sing 318 n n 
C11 H113 RW6 sing 319 n n 
C11 H111 RW6 sing 320 n n 
N1 H11 RW6 sing 321 n n 
#
_atom_sites.entry_id                     8BUF 
_atom_sites.fract_transf_matrix[1][1]    0.004006 
_atom_sites.fract_transf_matrix[1][2]    0.002313 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.004626 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.004532 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
J 4 SO4 A 1 1201 3 SO4 SO4 . 
K 4 SO4 A 1 1202 5 SO4 SO4 . 
L 4 SO4 A 1 1203 10 SO4 SO4 . 
M 4 SO4 A 1 1204 41 SO4 SO4 . 
N 4 SO4 A 1 1205 45 SO4 SO4 . 
O 4 SO4 A 1 1206 47 SO4 SO4 . 
P 4 SO4 A 1 1207 72 SO4 SO4 . 
Q 4 SO4 A 1 1208 75 SO4 SO4 . 
R 5 RW6 B 1 1101 1101 RW6 Z12 . 
S 4 SO4 B 1 1102 44 SO4 SO4 . 
T 4 SO4 B 1 1103 71 SO4 SO4 . 
U 4 SO4 C 1 301 4 SO4 SO4 . 
V 4 SO4 C 1 302 30 SO4 SO4 . 
W 4 SO4 D 1 1201 2 SO4 SO4 . 
X 4 SO4 D 1 1202 7 SO4 SO4 . 
Y 4 SO4 D 1 1203 9 SO4 SO4 . 
Z 4 SO4 D 1 1204 20 SO4 SO4 . 
AA 4 SO4 D 1 1205 29 SO4 SO4 . 
BA 4 SO4 D 1 1206 34 SO4 SO4 . 
CA 4 SO4 D 1 1207 36 SO4 SO4 . 
DA 4 SO4 D 1 1208 46 SO4 SO4 . 
EA 4 SO4 D 1 1209 61 SO4 SO4 . 
FA 5 RW6 E 1 1101 1101 RW6 Z12 . 
GA 4 SO4 E 1 1102 40 SO4 SO4 . 
HA 4 SO4 E 1 1103 43 SO4 SO4 . 
IA 4 SO4 E 1 1104 60 SO4 SO4 . 
JA 4 SO4 E 1 1105 62 SO4 SO4 . 
KA 4 SO4 F 1 301 26 SO4 SO4 . 
LA 4 SO4 F 1 302 31 SO4 SO4 . 
MA 4 SO4 F 1 303 63 SO4 SO4 . 
NA 4 SO4 F 1 304 66 SO4 SO4 . 
OA 4 SO4 G 1 1201 1 SO4 SO4 . 
PA 4 SO4 G 1 1202 8 SO4 SO4 . 
QA 4 SO4 G 1 1203 13 SO4 SO4 . 
RA 4 SO4 G 1 1204 14 SO4 SO4 . 
SA 4 SO4 G 1 1205 15 SO4 SO4 . 
TA 4 SO4 G 1 1206 28 SO4 SO4 . 
UA 4 SO4 G 1 1207 42 SO4 SO4 . 
VA 4 SO4 G 1 1208 54 SO4 SO4 . 
WA 4 SO4 G 1 1209 55 SO4 SO4 . 
XA 5 RW6 H 1 1101 1101 RW6 Z12 . 
YA 4 SO4 H 1 1102 33 SO4 SO4 . 
ZA 4 SO4 H 1 1103 38 SO4 SO4 . 
AB 4 SO4 H 1 1104 39 SO4 SO4 . 
BB 4 SO4 H 1 1105 50 SO4 SO4 . 
CB 4 SO4 H 1 1106 73 SO4 SO4 . 
DB 4 SO4 H 1 1107 74 SO4 SO4 . 
EB 4 SO4 I 1 301 12 SO4 SO4 . 
FB 4 SO4 I 1 302 32 SO4 SO4 . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C13 RW6 . . . XA 5 -133.094 16.56 7.175 1 134.47 ? C13 RW6 1101 H 1 
HETATM 2 C C14 RW6 . . . XA 5 -134.116 16.228 9.333 1 142.52 ? C14 RW6 1101 H 1 
HETATM 3 C C15 RW6 . . . XA 5 -133.214 18.462 8.691 1 122.82 ? C15 RW6 1101 H 1 
HETATM 4 C C17 RW6 . . . XA 5 -134.507 18.458 10.605 1 114.3 ? C17 RW6 1101 H 1 
HETATM 5 C C18 RW6 . . . XA 5 -134.163 19.768 10.537 1 123.21 ? C18 RW6 1101 H 1 
HETATM 6 C C12 RW6 . . . XA 5 -132.502 17.918 7.496 1 127.93 ? C12 RW6 1101 H 1 
HETATM 7 C C8 RW6 . . . XA 5 -130.384 10.121 11.836 1 116.55 ? C8 RW6 1101 H 1 
HETATM 8 C C7 RW6 . . . XA 5 -131.619 10.542 12.426 1 117.06 ? C7 RW6 1101 H 1 
HETATM 9 C C6 RW6 . . . XA 5 -132.428 11.424 11.778 1 114.41 ? C6 RW6 1101 H 1 
HETATM 10 C C1 RW6 . . . XA 5 -132.524 13.348 8.749 1 118.81 ? C1 RW6 1101 H 1 
HETATM 11 C C9 RW6 . . . XA 5 -129.996 10.621 10.631 1 111.43 ? C9 RW6 1101 H 1 
HETATM 12 C C5 RW6 . . . XA 5 -132.044 11.954 10.527 1 114.35 ? C5 RW6 1101 H 1 
HETATM 13 C C4 RW6 . . . XA 5 -130.818 11.552 9.952 1 113 ? C4 RW6 1101 H 1 
HETATM 14 C C3 RW6 . . . XA 5 -133.439 14.325 8.055 1 126.12 ? C3 RW6 1101 H 1 
HETATM 15 C C2 RW6 . . . XA 5 -130.445 12.12 8.662 1 116.18 ? C2 RW6 1101 H 1 
HETATM 16 C C10 RW6 . . . XA 5 -128.6 8.534 11.976 1 126.12 ? C10 RW6 1101 H 1 
HETATM 17 C C11 RW6 . . . XA 5 -133.089 10.296 14.295 1 123.34 ? C11 RW6 1101 H 1 
HETATM 18 C C16 RW6 . . . XA 5 -133.945 17.704 9.542 1 129.19 ? C16 RW6 1101 H 1 
HETATM 19 N N1 RW6 . . . XA 5 -131.342 13.008 8.114 1 120.99 ? N1 RW6 1101 H 1 
HETATM 20 N N2 RW6 . . . XA 5 -132.886 12.863 9.887 1 112.73 ? N2 RW6 1101 H 1 
HETATM 21 N N3 RW6 . . . XA 5 -133.132 15.722 8.378 1 138.87 ? N3 RW6 1101 H 1 
HETATM 22 O O1 RW6 . . . XA 5 -129.4 11.848 8.056 1 112.58 ? O1 RW6 1101 H 1 
HETATM 23 O O2 RW6 . . . XA 5 -129.686 9.222 12.59 1 118.86 ? O2 RW6 1101 H 1 
HETATM 24 O O3 RW6 . . . XA 5 -131.881 9.95 13.622 1 118.54 ? O3 RW6 1101 H 1 
HETATM 25 S S1 RW6 . . . XA 5 -133.173 20.114 9.186 1 201.67 ? S1 RW6 1101 H 1 
HETATM 26 H H131 RW6 . . . XA 5 -133.999 16.671 6.826 0 161.88 ? H131 RW6 1101 H 1 
HETATM 27 H H132 RW6 . . . XA 5 -132.555 16.121 6.489 0 161.88 ? H132 RW6 1101 H 1 
HETATM 28 H H142 RW6 . . . XA 5 -134.011 15.763 10.189 0 171.54 ? H142 RW6 1101 H 1 
HETATM 29 H H141 RW6 . . . XA 5 -135.019 16.049 8.997 0 171.54 ? H141 RW6 1101 H 1 
HETATM 30 H H171 RW6 . . . XA 5 -135.056 18.091 11.282 0 137.68 ? H171 RW6 1101 H 1 
HETATM 31 H H181 RW6 . . . XA 5 -134.435 20.421 11.16 0 148.36 ? H181 RW6 1101 H 1 
HETATM 32 H H122 RW6 . . . XA 5 -131.537 17.832 7.686 0 154.04 ? H122 RW6 1101 H 1 
HETATM 33 H H121 RW6 . . . XA 5 -132.615 18.527 6.728 0 154.04 ? H121 RW6 1101 H 1 
HETATM 34 H H61 RW6 . . . XA 5 -133.241 11.681 12.163 0 137.81 ? H61 RW6 1101 H 1 
HETATM 35 H H91 RW6 . . . XA 5 -129.18 10.346 10.248 0 134.23 ? H91 RW6 1101 H 1 
HETATM 36 H H32 RW6 . . . XA 5 -133.365 14.198 7.088 0 151.86 ? H32 RW6 1101 H 1 
HETATM 37 H H31 RW6 . . . XA 5 -134.363 14.134 8.314 0 151.86 ? H31 RW6 1101 H 1 
HETATM 38 H H103 RW6 . . . XA 5 -128.922 8.051 11.198 0 151.86 ? H103 RW6 1101 H 1 
HETATM 39 H H102 RW6 . . . XA 5 -127.925 9.176 11.702 0 151.86 ? H102 RW6 1101 H 1 
HETATM 40 H H101 RW6 . . . XA 5 -128.214 7.909 12.61 0 151.86 ? H101 RW6 1101 H 1 
HETATM 41 H H112 RW6 . . . XA 5 -133.848 10.061 13.737 0 148.52 ? H112 RW6 1101 H 1 
HETATM 42 H H113 RW6 . . . XA 5 -133.099 11.251 14.471 0 148.52 ? H113 RW6 1101 H 1 
HETATM 43 H H111 RW6 . . . XA 5 -133.141 9.811 15.135 0 148.52 ? H111 RW6 1101 H 1 
HETATM 44 H H11 RW6 . . . XA 5 -131.155 13.373 7.329 0 145.71 ? H11 RW6 1101 H 1 
#
_model_server_stats.io_time_ms              118 
_model_server_stats.parse_time_ms           22 
_model_server_stats.create_model_time_ms    75 
_model_server_stats.query_time_ms           252 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           44 
#