data_8BUO
#
_model_server_result.job_id            CALWe9qH5RyhQiQ202T1PA 
_model_server_result.datetime_utc      '2024-11-26 05:41:02' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          8buo 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"GA","auth_seq_id":1101}' 
#
_entry.id    8BUO 
#
_exptl.entry_id    8BUO 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              449.524 
_entity.id                          5 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            (2~{R})-2-[[6-[(3-fluoranyl-4-pyridin-2-yl-phenyl)methylamino]-9-propan-2-yl-purin-2-yl]amino]butan-1-ol 
_entity.pdbx_number_of_molecules    3 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            8BUO 
_cell.length_a            249.8 
_cell.length_b            249.8 
_cell.length_c            218.078 
_cell.Z_PDB               18 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 8BUO 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        152 
_symmetry.space_group_name_Hall    'P 31 2"' 
_symmetry.space_group_name_H-M     'P 31 2 1' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
? trimeric 3 author_defined_assembly 1 
? trimeric 3 author_defined_assembly 2 
? trimeric 3 author_defined_assembly 3 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,B,C,J,K,L,M,N,O,P,Q,R,S 1 1 
D,E,F,T,U,V,W,X,Y,Z,AA 2 1 
G,H,I,BA,CA,DA,EA,FA,GA,HA,IA,JA,KA,LA 3 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 5 O N N 
? 5 X N N 
? 5 GA N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 22 A CYS 18 1_555 A SG CYS 317 A CYS 313 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.046 ? 
covale ? covale1 B C TYR 184 B TYR 892 1_555 B N TPO 185 B TPO 893 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.335 ? 
covale ? covale2 B C TPO 185 B TPO 893 1_555 B N ASN 186 B ASN 894 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.333 ? 
covale ? covale3 E C TYR 184 E TYR 892 1_555 E N TPO 185 E TPO 893 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.326 ? 
covale ? covale4 E C TPO 185 E TPO 893 1_555 E N ASN 186 E ASN 894 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.334 ? 
covale ? covale5 H C TYR 184 H TYR 892 1_555 H N TPO 185 H TPO 893 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? 
covale ? covale6 H C TPO 185 H TPO 893 1_555 H N ASN 186 H ASN 894 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.336 ? 
#
_chem_comp.formula           'C24 H28 F N7 O' 
_chem_comp.formula_weight    449.524 
_chem_comp.id                RLC 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              (2~{R})-2-[[6-[(3-fluoranyl-4-pyridin-2-yl-phenyl)methylamino]-9-propan-2-yl-purin-2-yl]amino]butan-1-ol 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C19 C18 RLC sing 275 n n 
C18 C20 RLC sing 276 n n 
C18 N6 RLC sing 277 n n 
C17 N6 RLC sing 278 n y 
C17 N5 RLC doub 279 n y 
N6 C15 RLC sing 280 n y 
N5 C16 RLC sing 281 n y 
C15 C16 RLC doub 282 n y 
C15 N4 RLC sing 283 n y 
C16 C13 RLC sing 284 n y 
N4 C14 RLC doub 285 n y 
C24 C23 RLC sing 286 n n 
C23 C21 RLC sing 287 n n 
C13 N2 RLC sing 288 n n 
C13 N3 RLC doub 289 n y 
C14 N3 RLC sing 290 n y 
C14 N7 RLC sing 291 n n 
N2 C12 RLC sing 292 n n 
N7 C21 RLC sing 293 n n 
C21 C22 RLC sing 294 n n 
C22 O1 RLC sing 295 n n 
C12 C9 RLC sing 296 n n 
C9 C8 RLC doub 297 n y 
C9 C10 RLC sing 298 n y 
C8 C7 RLC sing 299 n y 
C10 C11 RLC doub 300 n y 
C7 F1 RLC sing 301 n n 
C7 C6 RLC doub 302 n y 
C11 C6 RLC sing 303 n y 
C6 C2 RLC sing 304 n n 
C2 N1 RLC doub 305 n y 
C2 C3 RLC sing 306 n y 
N1 C1 RLC sing 307 n y 
C3 C4 RLC doub 308 n y 
C1 C5 RLC doub 309 n y 
C4 C5 RLC sing 310 n y 
N2 H21 RLC sing 311 n n 
C8 H81 RLC sing 312 n n 
C10 H101 RLC sing 313 n n 
C11 H111 RLC sing 314 n n 
C12 H121 RLC sing 315 n n 
C12 H122 RLC sing 316 n n 
C1 H11 RLC sing 317 n n 
C3 H31 RLC sing 318 n n 
C4 H41 RLC sing 319 n n 
C5 H51 RLC sing 320 n n 
O1 H12 RLC sing 321 n n 
C17 H171 RLC sing 322 n n 
C18 H181 RLC sing 323 n n 
C19 H193 RLC sing 324 n n 
C19 H191 RLC sing 325 n n 
C19 H192 RLC sing 326 n n 
C20 H202 RLC sing 327 n n 
C20 H203 RLC sing 328 n n 
C20 H201 RLC sing 329 n n 
C21 H211 RLC sing 330 n n 
C22 H221 RLC sing 331 n n 
C22 H222 RLC sing 332 n n 
C23 H231 RLC sing 333 n n 
C23 H232 RLC sing 334 n n 
C24 H241 RLC sing 335 n n 
C24 H243 RLC sing 336 n n 
C24 H242 RLC sing 337 n n 
N7 H71 RLC sing 338 n n 
#
_atom_sites.entry_id                     8BUO 
_atom_sites.fract_transf_matrix[1][1]    0.004003 
_atom_sites.fract_transf_matrix[1][2]    0.002311 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.004623 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.004586 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
J 4 SO4 A 1 1201 3 SO4 SO4 . 
K 4 SO4 A 1 1202 5 SO4 SO4 . 
L 4 SO4 A 1 1203 11 SO4 SO4 . 
M 4 SO4 A 1 1204 35 SO4 SO4 . 
N 4 SO4 A 1 1205 41 SO4 SO4 . 
O 5 RLC B 1 1101 1101 RLC D24 . 
P 4 SO4 B 1 1102 44 SO4 SO4 . 
Q 4 SO4 C 1 301 4 SO4 SO4 . 
R 4 SO4 C 1 302 16 SO4 SO4 . 
S 4 SO4 C 1 303 30 SO4 SO4 . 
T 4 SO4 D 1 1201 2 SO4 SO4 . 
U 4 SO4 D 1 1202 7 SO4 SO4 . 
V 4 SO4 D 1 1203 36 SO4 SO4 . 
W 4 SO4 D 1 1204 46 SO4 SO4 . 
X 5 RLC E 1 1101 1101 RLC D24 . 
Y 4 SO4 E 1 1102 43 SO4 SO4 . 
Z 4 SO4 F 1 301 17 SO4 SO4 . 
AA 4 SO4 F 1 302 31 SO4 SO4 . 
BA 4 SO4 G 1 1201 1 SO4 SO4 . 
CA 4 SO4 G 1 1202 8 SO4 SO4 . 
DA 4 SO4 G 1 1203 13 SO4 SO4 . 
EA 4 SO4 G 1 1204 14 SO4 SO4 . 
FA 4 SO4 G 1 1205 15 SO4 SO4 . 
GA 5 RLC H 1 1101 1101 RLC D24 . 
HA 4 SO4 H 1 1102 33 SO4 SO4 . 
IA 4 SO4 H 1 1103 45 SO4 SO4 . 
JA 4 SO4 I 1 301 12 SO4 SO4 . 
KA 4 SO4 I 1 302 18 SO4 SO4 . 
LA 4 SO4 I 1 303 32 SO4 SO4 . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C7 RLC . . . GA 5 -133.163 16.524 7.982 1 167.83 ? C7 RLC 1101 H 1 
HETATM 2 N N2 RLC . . . GA 5 -132.28 12.18 8.042 1 148.46 ? N2 RLC 1101 H 1 
HETATM 3 N N1 RLC . . . GA 5 -133.199 19.221 8.71 1 168.23 ? N1 RLC 1101 H 1 
HETATM 4 C C8 RLC . . . GA 5 -133.116 15.207 7.571 1 156.09 ? C8 RLC 1101 H 1 
HETATM 5 C C9 RLC . . . GA 5 -133.636 14.222 8.396 1 157.81 ? C9 RLC 1101 H 1 
HETATM 6 C C10 RLC . . . GA 5 -134.217 14.618 9.591 1 157.45 ? C10 RLC 1101 H 1 
HETATM 7 C C11 RLC . . . GA 5 -134.264 15.945 9.983 1 149.96 ? C11 RLC 1101 H 1 
HETATM 8 C C12 RLC . . . GA 5 -133.605 12.77 7.976 1 156.88 ? C12 RLC 1101 H 1 
HETATM 9 C C1 RLC . . . GA 5 -133.176 20.519 9.045 1 163.93 ? C1 RLC 1101 H 1 
HETATM 10 C C2 RLC . . . GA 5 -133.76 18.364 9.578 1 157.08 ? C2 RLC 1101 H 1 
HETATM 11 C C3 RLC . . . GA 5 -134.277 18.795 10.792 1 144.98 ? C3 RLC 1101 H 1 
HETATM 12 C C4 RLC . . . GA 5 -134.238 20.139 11.103 1 149.32 ? C4 RLC 1101 H 1 
HETATM 13 C C5 RLC . . . GA 5 -133.68 21.021 10.217 1 163.43 ? C5 RLC 1101 H 1 
HETATM 14 C C6 RLC . . . GA 5 -133.744 16.936 9.17 1 160.86 ? C6 RLC 1101 H 1 
HETATM 15 O O1 RLC . . . GA 5 -135.408 11.379 11.577 1 126.38 ? O1 RLC 1101 H 1 
HETATM 16 C C13 RLC . . . GA 5 -131.816 11.506 9.111 1 146.95 ? C13 RLC 1101 H 1 
HETATM 17 C C14 RLC . . . GA 5 -132.035 10.924 11.383 1 152.69 ? C14 RLC 1101 H 1 
HETATM 18 C C15 RLC . . . GA 5 -130.313 10.055 10.225 1 140.16 ? C15 RLC 1101 H 1 
HETATM 19 C C16 RLC . . . GA 5 -130.672 10.687 9.051 1 142.84 ? C16 RLC 1101 H 1 
HETATM 20 C C17 RLC . . . GA 5 -128.92 9.557 8.612 1 129.63 ? C17 RLC 1101 H 1 
HETATM 21 C C18 RLC . . . GA 5 -128.403 8.465 10.825 1 145.94 ? C18 RLC 1101 H 1 
HETATM 22 C C19 RLC . . . GA 5 -129.076 7.139 11.111 1 147.67 ? C19 RLC 1101 H 1 
HETATM 23 C C20 RLC . . . GA 5 -128.038 9.223 12.094 1 154.6 ? C20 RLC 1101 H 1 
HETATM 24 C C21 RLC . . . GA 5 -133.819 10.202 13.012 1 154.71 ? C21 RLC 1101 H 1 
HETATM 25 C C22 RLC . . . GA 5 -134.9 10.096 11.936 1 146.76 ? C22 RLC 1101 H 1 
HETATM 26 C C23 RLC . . . GA 5 -133.244 8.861 13.482 1 141.14 ? C23 RLC 1101 H 1 
HETATM 27 C C24 RLC . . . GA 5 -133.106 7.817 12.425 1 122.69 ? C24 RLC 1101 H 1 
HETATM 28 F F1 RLC . . . GA 5 -132.634 17.466 7.167 1 179.82 ? F1 RLC 1101 H 1 
HETATM 29 N N3 RLC . . . GA 5 -132.49 11.578 10.278 1 146.51 ? N3 RLC 1101 H 1 
HETATM 30 N N4 RLC . . . GA 5 -130.942 10.129 11.407 1 143.13 ? N4 RLC 1101 H 1 
HETATM 31 N N5 RLC . . . GA 5 -129.78 10.366 8.037 1 138.52 ? N5 RLC 1101 H 1 
HETATM 32 N N6 RLC . . . GA 5 -129.189 9.311 9.927 1 132.95 ? N6 RLC 1101 H 1 
HETATM 33 N N7 RLC . . . GA 5 -132.729 11.072 12.538 1 156.1 ? N7 RLC 1101 H 1 
HETATM 34 H H21 RLC . . . GA 5 -131.752 12.268 7.343 0 178.65 ? H21 RLC 1101 H 1 
HETATM 35 H H81 RLC . . . GA 5 -132.728 14.973 6.723 0 187.8 ? H81 RLC 1101 H 1 
HETATM 36 H H101 RLC . . . GA 5 -134.592 13.962 10.156 0 189.44 ? H101 RLC 1101 H 1 
HETATM 37 H H111 RLC . . . GA 5 -134.654 16.174 10.812 0 180.44 ? H111 RLC 1101 H 1 
HETATM 38 H H121 RLC . . . GA 5 -133.94 12.697 7.058 0 188.74 ? H121 RLC 1101 H 1 
HETATM 39 H H122 RLC . . . GA 5 -134.21 12.259 8.554 0 188.74 ? H122 RLC 1101 H 1 
HETATM 40 H H11 RLC . . . GA 5 -132.785 21.122 8.432 0 197.21 ? H11 RLC 1101 H 1 
HETATM 41 H H31 RLC . . . GA 5 -134.652 18.171 11.398 0 174.47 ? H31 RLC 1101 H 1 
HETATM 42 H H41 RLC . . . GA 5 -134.595 20.446 11.922 0 179.68 ? H41 RLC 1101 H 1 
HETATM 43 H H51 RLC . . . GA 5 -133.643 21.945 10.406 0 196.61 ? H51 RLC 1101 H 1 
HETATM 44 H H12 RLC . . . GA 5 -135.966 11.282 10.948 0 152.15 ? H12 RLC 1101 H 1 
HETATM 45 H H171 RLC . . . GA 5 -128.179 9.175 8.162 0 156.05 ? H171 RLC 1101 H 1 
HETATM 46 H H181 RLC . . . GA 5 -127.554 8.232 10.364 0 175.62 ? H181 RLC 1101 H 1 
HETATM 47 H H193 RLC . . . GA 5 -128.465 6.566 11.606 0 177.69 ? H193 RLC 1101 H 1 
HETATM 48 H H191 RLC . . . GA 5 -129.316 6.71 10.272 0 177.69 ? H191 RLC 1101 H 1 
HETATM 49 H H192 RLC . . . GA 5 -129.879 7.29 11.639 0 177.69 ? H192 RLC 1101 H 1 
HETATM 50 H H202 RLC . . . GA 5 -127.641 10.079 11.858 0 186.01 ? H202 RLC 1101 H 1 
HETATM 51 H H203 RLC . . . GA 5 -128.84 9.373 12.625 0 186.01 ? H203 RLC 1101 H 1 
HETATM 52 H H201 RLC . . . GA 5 -127.4 8.701 12.611 0 186.01 ? H201 RLC 1101 H 1 
HETATM 53 H H211 RLC . . . GA 5 -134.249 10.627 13.808 0 186.15 ? H211 RLC 1101 H 1 
HETATM 54 H H221 RLC . . . GA 5 -134.522 9.66 11.143 0 176.6 ? H221 RLC 1101 H 1 
HETATM 55 H H222 RLC . . . GA 5 -135.632 9.536 12.271 0 176.6 ? H222 RLC 1101 H 1 
HETATM 56 H H231 RLC . . . GA 5 -132.36 9.025 13.873 0 169.86 ? H231 RLC 1101 H 1 
HETATM 57 H H232 RLC . . . GA 5 -133.824 8.509 14.191 0 169.86 ? H232 RLC 1101 H 1 
HETATM 58 H H241 RLC . . . GA 5 -133.988 7.539 12.125 0 147.73 ? H241 RLC 1101 H 1 
HETATM 59 H H243 RLC . . . GA 5 -132.63 7.049 12.787 0 147.73 ? H243 RLC 1101 H 1 
HETATM 60 H H242 RLC . . . GA 5 -132.608 8.18 11.673 0 147.73 ? H242 RLC 1101 H 1 
HETATM 61 H H71 RLC . . . GA 5 -132.51 11.749 13.055 0 187.81 ? H71 RLC 1101 H 1 
#
_model_server_stats.io_time_ms              127 
_model_server_stats.parse_time_ms           40 
_model_server_stats.create_model_time_ms    61 
_model_server_stats.query_time_ms           298 
_model_server_stats.encode_time_ms          3 
_model_server_stats.element_count           61 
#