data_8BUO # _model_server_result.job_id f022434gN9AiZhWoyHLLPg _model_server_result.datetime_utc '2024-11-26 05:35:18' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8buo # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"O","auth_seq_id":1101}' # _entry.id 8BUO # _exptl.entry_id 8BUO _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 449.524 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description (2~{R})-2-[[6-[(3-fluoranyl-4-pyridin-2-yl-phenyl)methylamino]-9-propan-2-yl-purin-2-yl]amino]butan-1-ol _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 8BUO _cell.length_a 249.8 _cell.length_b 249.8 _cell.length_c 218.078 _cell.Z_PDB 18 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8BUO _symmetry.cell_setting ? _symmetry.Int_Tables_number 152 _symmetry.space_group_name_Hall 'P 31 2"' _symmetry.space_group_name_H-M 'P 31 2 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? trimeric 3 author_defined_assembly 1 ? trimeric 3 author_defined_assembly 2 ? trimeric 3 author_defined_assembly 3 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,C,J,K,L,M,N,O,P,Q,R,S 1 1 D,E,F,T,U,V,W,X,Y,Z,AA 2 1 G,H,I,BA,CA,DA,EA,FA,GA,HA,IA,JA,KA,LA 3 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 5 O N N ? 5 X N N ? 5 GA N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 22 A CYS 18 1_555 A SG CYS 317 A CYS 313 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.046 ? covale ? covale1 B C TYR 184 B TYR 892 1_555 B N TPO 185 B TPO 893 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.335 ? covale ? covale2 B C TPO 185 B TPO 893 1_555 B N ASN 186 B ASN 894 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.333 ? covale ? covale3 E C TYR 184 E TYR 892 1_555 E N TPO 185 E TPO 893 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.326 ? covale ? covale4 E C TPO 185 E TPO 893 1_555 E N ASN 186 E ASN 894 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.334 ? covale ? covale5 H C TYR 184 H TYR 892 1_555 H N TPO 185 H TPO 893 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? covale ? covale6 H C TPO 185 H TPO 893 1_555 H N ASN 186 H ASN 894 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.336 ? # _chem_comp.formula 'C24 H28 F N7 O' _chem_comp.formula_weight 449.524 _chem_comp.id RLC _chem_comp.mon_nstd_flag . _chem_comp.name (2~{R})-2-[[6-[(3-fluoranyl-4-pyridin-2-yl-phenyl)methylamino]-9-propan-2-yl-purin-2-yl]amino]butan-1-ol _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C19 C18 RLC sing 275 n n C18 C20 RLC sing 276 n n C18 N6 RLC sing 277 n n C17 N6 RLC sing 278 n y C17 N5 RLC doub 279 n y N6 C15 RLC sing 280 n y N5 C16 RLC sing 281 n y C15 C16 RLC doub 282 n y C15 N4 RLC sing 283 n y C16 C13 RLC sing 284 n y N4 C14 RLC doub 285 n y C24 C23 RLC sing 286 n n C23 C21 RLC sing 287 n n C13 N2 RLC sing 288 n n C13 N3 RLC doub 289 n y C14 N3 RLC sing 290 n y C14 N7 RLC sing 291 n n N2 C12 RLC sing 292 n n N7 C21 RLC sing 293 n n C21 C22 RLC sing 294 n n C22 O1 RLC sing 295 n n C12 C9 RLC sing 296 n n C9 C8 RLC doub 297 n y C9 C10 RLC sing 298 n y C8 C7 RLC sing 299 n y C10 C11 RLC doub 300 n y C7 F1 RLC sing 301 n n C7 C6 RLC doub 302 n y C11 C6 RLC sing 303 n y C6 C2 RLC sing 304 n n C2 N1 RLC doub 305 n y C2 C3 RLC sing 306 n y N1 C1 RLC sing 307 n y C3 C4 RLC doub 308 n y C1 C5 RLC doub 309 n y C4 C5 RLC sing 310 n y N2 H21 RLC sing 311 n n C8 H81 RLC sing 312 n n C10 H101 RLC sing 313 n n C11 H111 RLC sing 314 n n C12 H121 RLC sing 315 n n C12 H122 RLC sing 316 n n C1 H11 RLC sing 317 n n C3 H31 RLC sing 318 n n C4 H41 RLC sing 319 n n C5 H51 RLC sing 320 n n O1 H12 RLC sing 321 n n C17 H171 RLC sing 322 n n C18 H181 RLC sing 323 n n C19 H193 RLC sing 324 n n C19 H191 RLC sing 325 n n C19 H192 RLC sing 326 n n C20 H202 RLC sing 327 n n C20 H203 RLC sing 328 n n C20 H201 RLC sing 329 n n C21 H211 RLC sing 330 n n C22 H221 RLC sing 331 n n C22 H222 RLC sing 332 n n C23 H231 RLC sing 333 n n C23 H232 RLC sing 334 n n C24 H241 RLC sing 335 n n C24 H243 RLC sing 336 n n C24 H242 RLC sing 337 n n N7 H71 RLC sing 338 n n # _atom_sites.entry_id 8BUO _atom_sites.fract_transf_matrix[1][1] 0.004003 _atom_sites.fract_transf_matrix[1][2] 0.002311 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.004623 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.004586 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code J 4 SO4 A 1 1201 3 SO4 SO4 . K 4 SO4 A 1 1202 5 SO4 SO4 . L 4 SO4 A 1 1203 11 SO4 SO4 . M 4 SO4 A 1 1204 35 SO4 SO4 . N 4 SO4 A 1 1205 41 SO4 SO4 . O 5 RLC B 1 1101 1101 RLC D24 . P 4 SO4 B 1 1102 44 SO4 SO4 . Q 4 SO4 C 1 301 4 SO4 SO4 . R 4 SO4 C 1 302 16 SO4 SO4 . S 4 SO4 C 1 303 30 SO4 SO4 . T 4 SO4 D 1 1201 2 SO4 SO4 . U 4 SO4 D 1 1202 7 SO4 SO4 . V 4 SO4 D 1 1203 36 SO4 SO4 . W 4 SO4 D 1 1204 46 SO4 SO4 . X 5 RLC E 1 1101 1101 RLC D24 . Y 4 SO4 E 1 1102 43 SO4 SO4 . Z 4 SO4 F 1 301 17 SO4 SO4 . AA 4 SO4 F 1 302 31 SO4 SO4 . BA 4 SO4 G 1 1201 1 SO4 SO4 . CA 4 SO4 G 1 1202 8 SO4 SO4 . DA 4 SO4 G 1 1203 13 SO4 SO4 . EA 4 SO4 G 1 1204 14 SO4 SO4 . FA 4 SO4 G 1 1205 15 SO4 SO4 . GA 5 RLC H 1 1101 1101 RLC D24 . HA 4 SO4 H 1 1102 33 SO4 SO4 . IA 4 SO4 H 1 1103 45 SO4 SO4 . JA 4 SO4 I 1 301 12 SO4 SO4 . KA 4 SO4 I 1 302 18 SO4 SO4 . LA 4 SO4 I 1 303 32 SO4 SO4 . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C7 RLC . . . O 5 -65.931 23.588 -1.484 1 192.67 ? C7 RLC 1101 B 1 HETATM 2 N N2 RLC . . . O 5 -64.016 22.32 -5.298 1 149.02 ? N2 RLC 1101 B 1 HETATM 3 N N1 RLC . . . O 5 -66.783 25.198 0.626 1 182.75 ? N1 RLC 1101 B 1 HETATM 4 C C8 RLC . . . O 5 -65.565 22.786 -2.547 1 178.01 ? C8 RLC 1101 B 1 HETATM 5 C C9 RLC . . . O 5 -64.221 22.63 -2.846 1 164.27 ? C9 RLC 1101 B 1 HETATM 6 C C10 RLC . . . O 5 -63.299 23.261 -2.029 1 165.6 ? C10 RLC 1101 B 1 HETATM 7 C C11 RLC . . . O 5 -63.682 24.053 -0.961 1 158.83 ? C11 RLC 1101 B 1 HETATM 8 C C12 RLC . . . O 5 -63.785 21.742 -3.988 1 147.33 ? C12 RLC 1101 B 1 HETATM 9 C C1 RLC . . . O 5 -67.214 25.994 1.614 1 175.4 ? C1 RLC 1101 B 1 HETATM 10 C C2 RLC . . . O 5 -65.457 25.084 0.464 1 172.51 ? C2 RLC 1101 B 1 HETATM 11 C C3 RLC . . . O 5 -64.564 25.779 1.267 1 161.54 ? C3 RLC 1101 B 1 HETATM 12 C C4 RLC . . . O 5 -65.045 26.587 2.276 1 168.3 ? C4 RLC 1101 B 1 HETATM 13 C C5 RLC . . . O 5 -66.395 26.7 2.459 1 175.53 ? C5 RLC 1101 B 1 HETATM 14 C C6 RLC . . . O 5 -65.019 24.217 -0.655 1 176.68 ? C6 RLC 1101 B 1 HETATM 15 O O1 RLC . . . O 5 -59.472 22.803 -3.034 1 150.38 ? O1 RLC 1101 B 1 HETATM 16 C C13 RLC . . . O 5 -63.105 23.061 -5.956 1 152.04 ? C13 RLC 1101 B 1 HETATM 17 C C14 RLC . . . O 5 -61.084 24.264 -5.922 1 150.68 ? C14 RLC 1101 B 1 HETATM 18 C C15 RLC . . . O 5 -62.197 24.116 -7.868 1 156.9 ? C15 RLC 1101 B 1 HETATM 19 C C16 RLC . . . O 5 -63.214 23.354 -7.33 1 156.58 ? C16 RLC 1101 B 1 HETATM 20 C C17 RLC . . . O 5 -63.69 23.622 -9.389 1 145.73 ? C17 RLC 1101 B 1 HETATM 21 C C18 RLC . . . O 5 -61.783 25.015 -10.229 1 149.11 ? C18 RLC 1101 B 1 HETATM 22 C C19 RLC . . . O 5 -60.589 24.22 -10.751 1 131.49 ? C19 RLC 1101 B 1 HETATM 23 C C20 RLC . . . O 5 -61.372 26.395 -9.753 1 152.67 ? C20 RLC 1101 B 1 HETATM 24 C C21 RLC . . . O 5 -58.745 24.051 -4.987 1 155.27 ? C21 RLC 1101 B 1 HETATM 25 C C22 RLC . . . O 5 -58.955 22.674 -4.36 1 160.35 ? C22 RLC 1101 B 1 HETATM 26 C C23 RLC . . . O 5 -57.968 24.021 -6.307 1 140.19 ? C23 RLC 1101 B 1 HETATM 27 C C24 RLC . . . O 5 -58.2 22.788 -7.136 1 156.54 ? C24 RLC 1101 B 1 HETATM 28 F F1 RLC . . . O 5 -67.25 23.744 -1.216 1 202.73 ? F1 RLC 1101 B 1 HETATM 29 N N3 RLC . . . O 5 -62.015 23.499 -5.292 1 140.17 ? N3 RLC 1101 B 1 HETATM 30 N N4 RLC . . . O 5 -61.121 24.592 -7.23 1 164.16 ? N4 RLC 1101 B 1 HETATM 31 N N5 RLC . . . O 5 -64.155 23.047 -8.304 1 157.63 ? N5 RLC 1101 B 1 HETATM 32 N N6 RLC . . . O 5 -62.511 24.282 -9.196 1 152.76 ? N6 RLC 1101 B 1 HETATM 33 N N7 RLC . . . O 5 -60.034 24.723 -5.204 1 155.06 ? N7 RLC 1101 B 1 HETATM 34 H H21 RLC . . . O 5 -64.795 22.177 -5.683 0 179.32 ? H21 RLC 1101 B 1 HETATM 35 H H81 RLC . . . O 5 -66.233 22.34 -3.074 0 214.1 ? H81 RLC 1101 B 1 HETATM 36 H H101 RLC . . . O 5 -62.38 23.147 -2.205 0 199.21 ? H101 RLC 1101 B 1 HETATM 37 H H111 RLC . . . O 5 -63.024 24.483 -0.439 0 191.08 ? H111 RLC 1101 B 1 HETATM 38 H H121 RLC . . . O 5 -62.829 21.55 -3.892 0 177.29 ? H121 RLC 1101 B 1 HETATM 39 H H122 RLC . . . O 5 -64.268 20.891 -3.929 0 177.29 ? H122 RLC 1101 B 1 HETATM 40 H H11 RLC . . . O 5 -68.148 26.072 1.733 0 210.97 ? H11 RLC 1101 B 1 HETATM 41 H H31 RLC . . . O 5 -63.631 25.696 1.122 0 194.35 ? H31 RLC 1101 B 1 HETATM 42 H H41 RLC . . . O 5 -64.447 27.056 2.835 0 202.45 ? H41 RLC 1101 B 1 HETATM 43 H H51 RLC . . . O 5 -66.752 27.244 3.142 0 211.13 ? H51 RLC 1101 B 1 HETATM 44 H H12 RLC . . . O 5 -59.546 22.03 -2.697 0 180.95 ? H12 RLC 1101 B 1 HETATM 45 H H171 RLC . . . O 5 -64.126 23.586 -10.23 0 175.37 ? H171 RLC 1101 B 1 HETATM 46 H H181 RLC . . . O 5 -62.403 25.145 -10.996 0 179.42 ? H181 RLC 1101 B 1 HETATM 47 H H193 RLC . . . O 5 -59.921 24.14 -10.049 0 158.28 ? H193 RLC 1101 B 1 HETATM 48 H H191 RLC . . . O 5 -60.202 24.68 -11.516 0 158.28 ? H191 RLC 1101 B 1 HETATM 49 H H192 RLC . . . O 5 -60.883 23.333 -11.022 0 158.28 ? H192 RLC 1101 B 1 HETATM 50 H H202 RLC . . . O 5 -60.664 26.311 -9.09 0 183.69 ? H202 RLC 1101 B 1 HETATM 51 H H203 RLC . . . O 5 -62.138 26.842 -9.354 0 183.69 ? H203 RLC 1101 B 1 HETATM 52 H H201 RLC . . . O 5 -61.049 26.916 -10.508 0 183.69 ? H201 RLC 1101 B 1 HETATM 53 H H211 RLC . . . O 5 -58.217 24.584 -4.326 0 186.82 ? H211 RLC 1101 B 1 HETATM 54 H H221 RLC . . . O 5 -58.1 22.193 -4.337 0 192.91 ? H221 RLC 1101 B 1 HETATM 55 H H222 RLC . . . O 5 -59.581 22.157 -4.911 0 192.91 ? H222 RLC 1101 B 1 HETATM 56 H H231 RLC . . . O 5 -58.221 24.807 -6.836 0 168.72 ? H231 RLC 1101 B 1 HETATM 57 H H232 RLC . . . O 5 -57.01 24.09 -6.108 0 168.72 ? H232 RLC 1101 B 1 HETATM 58 H H241 RLC . . . O 5 -59.156 22.658 -7.265 0 188.34 ? H241 RLC 1101 B 1 HETATM 59 H H243 RLC . . . O 5 -57.828 22.014 -6.679 0 188.34 ? H243 RLC 1101 B 1 HETATM 60 H H242 RLC . . . O 5 -57.768 22.892 -8.001 0 188.34 ? H242 RLC 1101 B 1 HETATM 61 H H71 RLC . . . O 5 -60.131 25.511 -4.823 0 186.57 ? H71 RLC 1101 B 1 # _model_server_stats.io_time_ms 128 _model_server_stats.parse_time_ms 27 _model_server_stats.create_model_time_ms 85 _model_server_stats.query_time_ms 274 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 61 #