data_8BUO # _model_server_result.job_id g6bDtCs-alYGmwfMXCn1dg _model_server_result.datetime_utc '2024-11-05 04:11:09' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8buo # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"X","auth_seq_id":1101}' # _entry.id 8BUO # _exptl.entry_id 8BUO _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 449.524 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description (2~{R})-2-[[6-[(3-fluoranyl-4-pyridin-2-yl-phenyl)methylamino]-9-propan-2-yl-purin-2-yl]amino]butan-1-ol _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 8BUO _cell.length_a 249.8 _cell.length_b 249.8 _cell.length_c 218.078 _cell.Z_PDB 18 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8BUO _symmetry.cell_setting ? _symmetry.Int_Tables_number 152 _symmetry.space_group_name_Hall 'P 31 2"' _symmetry.space_group_name_H-M 'P 31 2 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? trimeric 3 author_defined_assembly 1 ? trimeric 3 author_defined_assembly 2 ? trimeric 3 author_defined_assembly 3 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,C,J,K,L,M,N,O,P,Q,R,S 1 1 D,E,F,T,U,V,W,X,Y,Z,AA 2 1 G,H,I,BA,CA,DA,EA,FA,GA,HA,IA,JA,KA,LA 3 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 5 O N N ? 5 X N N ? 5 GA N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 22 A CYS 18 1_555 A SG CYS 317 A CYS 313 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.046 ? covale ? covale1 B C TYR 184 B TYR 892 1_555 B N TPO 185 B TPO 893 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.335 ? covale ? covale2 B C TPO 185 B TPO 893 1_555 B N ASN 186 B ASN 894 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.333 ? covale ? covale3 E C TYR 184 E TYR 892 1_555 E N TPO 185 E TPO 893 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.326 ? covale ? covale4 E C TPO 185 E TPO 893 1_555 E N ASN 186 E ASN 894 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.334 ? covale ? covale5 H C TYR 184 H TYR 892 1_555 H N TPO 185 H TPO 893 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? covale ? covale6 H C TPO 185 H TPO 893 1_555 H N ASN 186 H ASN 894 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.336 ? # _chem_comp.formula 'C24 H28 F N7 O' _chem_comp.formula_weight 449.524 _chem_comp.id RLC _chem_comp.mon_nstd_flag . _chem_comp.name (2~{R})-2-[[6-[(3-fluoranyl-4-pyridin-2-yl-phenyl)methylamino]-9-propan-2-yl-purin-2-yl]amino]butan-1-ol _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C19 C18 RLC sing 275 n n C18 C20 RLC sing 276 n n C18 N6 RLC sing 277 n n C17 N6 RLC sing 278 n y C17 N5 RLC doub 279 n y N6 C15 RLC sing 280 n y N5 C16 RLC sing 281 n y C15 C16 RLC doub 282 n y C15 N4 RLC sing 283 n y C16 C13 RLC sing 284 n y N4 C14 RLC doub 285 n y C24 C23 RLC sing 286 n n C23 C21 RLC sing 287 n n C13 N2 RLC sing 288 n n C13 N3 RLC doub 289 n y C14 N3 RLC sing 290 n y C14 N7 RLC sing 291 n n N2 C12 RLC sing 292 n n N7 C21 RLC sing 293 n n C21 C22 RLC sing 294 n n C22 O1 RLC sing 295 n n C12 C9 RLC sing 296 n n C9 C8 RLC doub 297 n y C9 C10 RLC sing 298 n y C8 C7 RLC sing 299 n y C10 C11 RLC doub 300 n y C7 F1 RLC sing 301 n n C7 C6 RLC doub 302 n y C11 C6 RLC sing 303 n y C6 C2 RLC sing 304 n n C2 N1 RLC doub 305 n y C2 C3 RLC sing 306 n y N1 C1 RLC sing 307 n y C3 C4 RLC doub 308 n y C1 C5 RLC doub 309 n y C4 C5 RLC sing 310 n y N2 H21 RLC sing 311 n n C8 H81 RLC sing 312 n n C10 H101 RLC sing 313 n n C11 H111 RLC sing 314 n n C12 H121 RLC sing 315 n n C12 H122 RLC sing 316 n n C1 H11 RLC sing 317 n n C3 H31 RLC sing 318 n n C4 H41 RLC sing 319 n n C5 H51 RLC sing 320 n n O1 H12 RLC sing 321 n n C17 H171 RLC sing 322 n n C18 H181 RLC sing 323 n n C19 H193 RLC sing 324 n n C19 H191 RLC sing 325 n n C19 H192 RLC sing 326 n n C20 H202 RLC sing 327 n n C20 H203 RLC sing 328 n n C20 H201 RLC sing 329 n n C21 H211 RLC sing 330 n n C22 H221 RLC sing 331 n n C22 H222 RLC sing 332 n n C23 H231 RLC sing 333 n n C23 H232 RLC sing 334 n n C24 H241 RLC sing 335 n n C24 H243 RLC sing 336 n n C24 H242 RLC sing 337 n n N7 H71 RLC sing 338 n n # _atom_sites.entry_id 8BUO _atom_sites.fract_transf_matrix[1][1] 0.004003 _atom_sites.fract_transf_matrix[1][2] 0.002311 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.004623 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.004586 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code J 4 SO4 A 1 1201 3 SO4 SO4 . K 4 SO4 A 1 1202 5 SO4 SO4 . L 4 SO4 A 1 1203 11 SO4 SO4 . M 4 SO4 A 1 1204 35 SO4 SO4 . N 4 SO4 A 1 1205 41 SO4 SO4 . O 5 RLC B 1 1101 1101 RLC D24 . P 4 SO4 B 1 1102 44 SO4 SO4 . Q 4 SO4 C 1 301 4 SO4 SO4 . R 4 SO4 C 1 302 16 SO4 SO4 . S 4 SO4 C 1 303 30 SO4 SO4 . T 4 SO4 D 1 1201 2 SO4 SO4 . U 4 SO4 D 1 1202 7 SO4 SO4 . V 4 SO4 D 1 1203 36 SO4 SO4 . W 4 SO4 D 1 1204 46 SO4 SO4 . X 5 RLC E 1 1101 1101 RLC D24 . Y 4 SO4 E 1 1102 43 SO4 SO4 . Z 4 SO4 F 1 301 17 SO4 SO4 . AA 4 SO4 F 1 302 31 SO4 SO4 . BA 4 SO4 G 1 1201 1 SO4 SO4 . CA 4 SO4 G 1 1202 8 SO4 SO4 . DA 4 SO4 G 1 1203 13 SO4 SO4 . EA 4 SO4 G 1 1204 14 SO4 SO4 . FA 4 SO4 G 1 1205 15 SO4 SO4 . GA 5 RLC H 1 1101 1101 RLC D24 . HA 4 SO4 H 1 1102 33 SO4 SO4 . IA 4 SO4 H 1 1103 45 SO4 SO4 . JA 4 SO4 I 1 301 12 SO4 SO4 . KA 4 SO4 I 1 302 18 SO4 SO4 . LA 4 SO4 I 1 303 32 SO4 SO4 . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C7 RLC . . . X 5 -109.027 56.968 -44.113 1 186.3 ? C7 RLC 1101 E 1 HETATM 2 N N2 RLC . . . X 5 -112.047 56.008 -47.752 1 157.77 ? N2 RLC 1101 E 1 HETATM 3 N N1 RLC . . . X 5 -107.667 58.857 -42.541 1 169.77 ? N1 RLC 1101 E 1 HETATM 4 C C8 RLC . . . X 5 -109.595 56.01 -44.931 1 179.01 ? C8 RLC 1101 E 1 HETATM 5 C C9 RLC . . . X 5 -110.413 56.414 -45.973 1 164.65 ? C9 RLC 1101 E 1 HETATM 6 C C10 RLC . . . X 5 -110.641 57.771 -46.136 1 160.88 ? C10 RLC 1101 E 1 HETATM 7 C C11 RLC . . . X 5 -110.079 58.718 -45.297 1 157.83 ? C11 RLC 1101 E 1 HETATM 8 C C12 RLC . . . X 5 -111.054 55.401 -46.891 1 151.4 ? C12 RLC 1101 E 1 HETATM 9 C C1 RLC . . . X 5 -107.103 59.726 -41.692 1 163.14 ? C1 RLC 1101 E 1 HETATM 10 C C2 RLC . . . X 5 -108.655 59.315 -43.322 1 163.31 ? C2 RLC 1101 E 1 HETATM 11 C C3 RLC . . . X 5 -109.079 60.633 -43.257 1 142.34 ? C3 RLC 1101 E 1 HETATM 12 C C4 RLC . . . X 5 -108.481 61.496 -42.365 1 157.19 ? C4 RLC 1101 E 1 HETATM 13 C C5 RLC . . . X 5 -107.475 61.038 -41.563 1 172.01 ? C5 RLC 1101 E 1 HETATM 14 C C6 RLC . . . X 5 -109.258 58.328 -44.252 1 172.83 ? C6 RLC 1101 E 1 HETATM 15 O O1 RLC . . . X 5 -114.033 58.511 -50.451 1 136.89 ? O1 RLC 1101 E 1 HETATM 16 C C13 RLC . . . X 5 -113.377 55.924 -47.575 1 145.23 ? C13 RLC 1101 E 1 HETATM 17 C C14 RLC . . . X 5 -115.462 56.968 -47.796 1 161.97 ? C14 RLC 1101 E 1 HETATM 18 C C15 RLC . . . X 5 -115.422 54.879 -47.002 1 139.41 ? C15 RLC 1101 E 1 HETATM 19 C C16 RLC . . . X 5 -114.048 54.78 -47.089 1 135.51 ? C16 RLC 1101 E 1 HETATM 20 C C17 RLC . . . X 5 -114.749 52.917 -46.328 1 121.96 ? C17 RLC 1101 E 1 HETATM 21 C C18 RLC . . . X 5 -117.234 53.277 -46.23 1 130.14 ? C18 RLC 1101 E 1 HETATM 22 C C19 RLC . . . X 5 -117.992 52.889 -47.497 1 140.82 ? C19 RLC 1101 E 1 HETATM 23 C C20 RLC . . . X 5 -118.005 54.313 -45.434 1 144.26 ? C20 RLC 1101 E 1 HETATM 24 C C21 RLC . . . X 5 -116.215 58.778 -49.391 1 162.09 ? C21 RLC 1101 E 1 HETATM 25 C C22 RLC . . . X 5 -114.889 59.423 -49.792 1 143.27 ? C22 RLC 1101 E 1 HETATM 26 C C23 RLC . . . X 5 -116.731 57.801 -50.466 1 156.14 ? C23 RLC 1101 E 1 HETATM 27 C C24 RLC . . . X 5 -118.128 57.239 -50.258 1 147.81 ? C24 RLC 1101 E 1 HETATM 28 F F1 RLC . . . X 5 -108.235 56.55 -43.095 1 194.77 ? F1 RLC 1101 E 1 HETATM 29 N N3 RLC . . . X 5 -114.114 56.994 -47.939 1 155.7 ? N3 RLC 1101 E 1 HETATM 30 N N4 RLC . . . X 5 -116.178 55.928 -47.333 1 157.58 ? N4 RLC 1101 E 1 HETATM 31 N N5 RLC . . . X 5 -113.633 53.526 -46.659 1 131.96 ? N5 RLC 1101 E 1 HETATM 32 N N6 RLC . . . X 5 -115.863 53.681 -46.52 1 124.85 ? N6 RLC 1101 E 1 HETATM 33 N N7 RLC . . . X 5 -116.183 58.052 -48.12 1 168.52 ? N7 RLC 1101 E 1 HETATM 34 H H21 RLC . . . X 5 -111.755 56.467 -48.445 0 189.81 ? H21 RLC 1101 E 1 HETATM 35 H H81 RLC . . . X 5 -109.426 55.076 -44.781 0 215.3 ? H81 RLC 1101 E 1 HETATM 36 H H101 RLC . . . X 5 -111.196 58.06 -46.841 0 193.55 ? H101 RLC 1101 E 1 HETATM 37 H H111 RLC . . . X 5 -110.258 59.635 -45.438 0 189.89 ? H111 RLC 1101 E 1 HETATM 38 H H121 RLC . . . X 5 -111.477 54.699 -46.354 0 182.17 ? H121 RLC 1101 E 1 HETATM 39 H H122 RLC . . . X 5 -110.362 54.979 -47.441 0 182.17 ? H122 RLC 1101 E 1 HETATM 40 H H11 RLC . . . X 5 -106.401 59.407 -41.146 0 196.26 ? H11 RLC 1101 E 1 HETATM 41 H H31 RLC . . . X 5 -109.776 60.936 -43.824 0 171.31 ? H31 RLC 1101 E 1 HETATM 42 H H41 RLC . . . X 5 -108.765 62.394 -42.309 0 189.12 ? H41 RLC 1101 E 1 HETATM 43 H H51 RLC . . . X 5 -107.049 61.606 -40.941 0 206.9 ? H51 RLC 1101 E 1 HETATM 44 H H12 RLC . . . X 5 -113.337 58.924 -50.696 0 164.77 ? H12 RLC 1101 E 1 HETATM 45 H H171 RLC . . . X 5 -114.785 52.032 -45.989 0 146.85 ? H171 RLC 1101 E 1 HETATM 46 H H181 RLC . . . X 5 -117.167 52.47 -45.654 0 156.66 ? H181 RLC 1101 E 1 HETATM 47 H H193 RLC . . . X 5 -118.812 52.424 -47.254 0 169.48 ? H193 RLC 1101 E 1 HETATM 48 H H191 RLC . . . X 5 -118.211 53.69 -48.003 0 169.48 ? H191 RLC 1101 E 1 HETATM 49 H H192 RLC . . . X 5 -117.436 52.303 -48.041 0 169.48 ? H192 RLC 1101 E 1 HETATM 50 H H202 RLC . . . X 5 -117.465 54.611 -44.681 0 173.6 ? H202 RLC 1101 E 1 HETATM 51 H H203 RLC . . . X 5 -118.212 55.073 -46.005 0 173.6 ? H203 RLC 1101 E 1 HETATM 52 H H201 RLC . . . X 5 -118.832 53.92 -45.105 0 173.6 ? H201 RLC 1101 E 1 HETATM 53 H H211 RLC . . . X 5 -116.834 59.551 -49.252 0 195 ? H211 RLC 1101 E 1 HETATM 54 H H221 RLC . . . X 5 -115.07 60.184 -50.383 0 172.41 ? H221 RLC 1101 E 1 HETATM 55 H H222 RLC . . . X 5 -114.443 59.762 -48.986 0 172.41 ? H222 RLC 1101 E 1 HETATM 56 H H231 RLC . . . X 5 -116.713 58.265 -51.33 0 187.86 ? H231 RLC 1101 E 1 HETATM 57 H H232 RLC . . . X 5 -116.103 57.049 -50.518 0 187.86 ? H232 RLC 1101 E 1 HETATM 58 H H241 RLC . . . X 5 -118.781 57.958 -50.321 0 177.86 ? H241 RLC 1101 E 1 HETATM 59 H H243 RLC . . . X 5 -118.316 56.571 -50.941 0 177.86 ? H243 RLC 1101 E 1 HETATM 60 H H242 RLC . . . X 5 -118.186 56.827 -49.378 0 177.86 ? H242 RLC 1101 E 1 HETATM 61 H H71 RLC . . . X 5 -116.707 58.37 -47.488 0 202.72 ? H71 RLC 1101 E 1 # _model_server_stats.io_time_ms 138 _model_server_stats.parse_time_ms 26 _model_server_stats.create_model_time_ms 81 _model_server_stats.query_time_ms 280 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 61 #