data_8BUQ # _model_server_result.job_id 0bK3-GuMkFLqG5nT9zKASw _model_server_result.datetime_utc '2024-11-29 15:34:51' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8buq # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"K","auth_seq_id":1101}' # _entry.id 8BUQ # _exptl.entry_id 8BUQ _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 454.956 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description (2~{R})-2-[[6-[[1-(3-chlorophenyl)pyrazol-3-yl]methylamino]-9-propan-2-yl-purin-2-yl]amino]butan-1-ol _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 8BUQ _cell.length_a 250.162 _cell.length_b 250.162 _cell.length_c 218.849 _cell.Z_PDB 18 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8BUQ _symmetry.cell_setting ? _symmetry.Int_Tables_number 152 _symmetry.space_group_name_Hall 'P 31 2"' _symmetry.space_group_name_H-M 'P 31 2 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? trimeric 3 author_defined_assembly 1 ? trimeric 3 author_defined_assembly 2 ? trimeric 3 author_defined_assembly 3 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,C,J,K,L 1 1 D,E,F,M,N,O 2 1 G,H,I,P,Q,R 3 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 5 K N N ? 5 N N N ? 5 P N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 22 A CYS 18 1_555 A SG CYS 317 A CYS 313 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.042 ? disulf ? disulf2 G SG CYS 22 G CYS 18 1_555 G SG CYS 317 G CYS 313 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.04 ? covale ? covale1 B C TYR 184 B TYR 892 1_555 B N TPO 185 B TPO 893 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale2 B C TPO 185 B TPO 893 1_555 B N ASN 186 B ASN 894 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale3 E C TYR 184 E TYR 892 1_555 E N TPO 185 E TPO 893 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale4 E C TPO 185 E TPO 893 1_555 E N ASN 186 E ASN 894 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? covale ? covale5 H C TYR 184 H TYR 892 1_555 H N TPO 185 H TPO 893 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.324 ? covale ? covale6 H C TPO 185 H TPO 893 1_555 H N ASN 186 H ASN 894 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? # _chem_comp.formula 'C22 H27 Cl N8 O' _chem_comp.formula_weight 454.956 _chem_comp.id RQ9 _chem_comp.mon_nstd_flag . _chem_comp.name (2~{R})-2-[[6-[[1-(3-chlorophenyl)pyrazol-3-yl]methylamino]-9-propan-2-yl-purin-2-yl]amino]butan-1-ol _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C3 C2 RQ9 sing 295 n n C1 C2 RQ9 sing 296 n n C2 N1 RQ9 sing 297 n n C4 N1 RQ9 sing 298 n y C4 N2 RQ9 doub 299 n y N1 C5 RQ9 sing 300 n y N2 C6 RQ9 sing 301 n y C5 C6 RQ9 doub 302 n y C5 N8 RQ9 sing 303 n y C6 C7 RQ9 sing 304 n y O1 C20 RQ9 sing 305 n n N8 C18 RQ9 doub 306 n y C20 C19 RQ9 sing 307 n n C7 N3 RQ9 sing 308 n n C7 N6 RQ9 doub 309 n y C22 C21 RQ9 sing 310 n n C18 N6 RQ9 sing 311 n y C18 N7 RQ9 sing 312 n n N3 C8 RQ9 sing 313 n n C19 N7 RQ9 sing 314 n n C19 C21 RQ9 sing 315 n n C8 C9 RQ9 sing 316 n n C9 N4 RQ9 doub 317 n y C9 C17 RQ9 sing 318 n y N4 N5 RQ9 sing 319 n y C17 C16 RQ9 doub 320 n y N5 C16 RQ9 sing 321 n y N5 C10 RQ9 sing 322 n n C11 C10 RQ9 doub 323 n y C11 C12 RQ9 sing 324 n y C10 C15 RQ9 sing 325 n y C12 C13 RQ9 doub 326 n y C15 C14 RQ9 doub 327 n y C13 C14 RQ9 sing 328 n y C14 CL1 RQ9 sing 329 n n C13 H14 RQ9 sing 330 n n C17 H17 RQ9 sing 331 n n C20 H21 RQ9 sing 332 n n C20 H20 RQ9 sing 333 n n C1 H3 RQ9 sing 334 n n C1 H1 RQ9 sing 335 n n C1 H2 RQ9 sing 336 n n C2 H4 RQ9 sing 337 n n C3 H6 RQ9 sing 338 n n C3 H7 RQ9 sing 339 n n C3 H5 RQ9 sing 340 n n C4 H8 RQ9 sing 341 n n N7 H18 RQ9 sing 342 n n C8 H11 RQ9 sing 343 n n C8 H10 RQ9 sing 344 n n C12 H13 RQ9 sing 345 n n C19 H19 RQ9 sing 346 n n C22 H26 RQ9 sing 347 n n C22 H27 RQ9 sing 348 n n C22 H25 RQ9 sing 349 n n C11 H12 RQ9 sing 350 n n C15 H15 RQ9 sing 351 n n C16 H16 RQ9 sing 352 n n C21 H24 RQ9 sing 353 n n C21 H23 RQ9 sing 354 n n N3 H9 RQ9 sing 355 n n O1 H22 RQ9 sing 356 n n # _atom_sites.entry_id 8BUQ _atom_sites.fract_transf_matrix[1][1] 0.003997 _atom_sites.fract_transf_matrix[1][2] 0.002308 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.004616 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.004569 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code J 4 CIT A 1 1201 1201 CIT CIT . K 5 RQ9 B 1 1101 1101 RQ9 D43 . L 4 CIT C 1 301 301 CIT CIT . M 4 CIT D 1 1201 1201 CIT CIT . N 5 RQ9 E 1 1101 1101 RQ9 D43 . O 4 CIT F 1 301 301 CIT CIT . P 5 RQ9 H 1 1101 1101 RQ9 D43 . Q 4 CIT H 1 1102 1102 CIT CIT . R 4 CIT I 1 301 301 CIT CIT . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C10 RQ9 . . . K 5 -65.113 24.413 -0.552 1 129.28 ? C10 RQ9 1101 B 1 HETATM 2 C C13 RQ9 . . . K 5 -66.721 25.83 1.193 1 128.13 ? C13 RQ9 1101 B 1 HETATM 3 C C17 RQ9 . . . K 5 -62.631 22.736 -2.511 1 123.2 ? C17 RQ9 1101 B 1 HETATM 4 C C20 RQ9 . . . K 5 -58.373 23.341 -7.02 1 127.35 ? C20 RQ9 1101 B 1 HETATM 5 C C14 RQ9 . . . K 5 -65.348 25.92 1.263 1 128.57 ? C14 RQ9 1101 B 1 HETATM 6 C C18 RQ9 . . . K 5 -60.956 23.989 -5.99 1 120.75 ? C18 RQ9 1101 B 1 HETATM 7 C C1 RQ9 . . . K 5 -61.781 26.778 -10.417 1 131.22 ? C1 RQ9 1101 B 1 HETATM 8 C C2 RQ9 . . . K 5 -61.298 25.378 -10.109 1 116.85 ? C2 RQ9 1101 B 1 HETATM 9 C C3 RQ9 . . . K 5 -61.033 24.546 -11.342 1 115.77 ? C3 RQ9 1101 B 1 HETATM 10 C C4 RQ9 . . . K 5 -63.546 24.289 -9.496 1 115.77 ? C4 RQ9 1101 B 1 HETATM 11 C C5 RQ9 . . . K 5 -62.024 24.306 -7.933 1 117.75 ? C5 RQ9 1101 B 1 HETATM 12 C C6 RQ9 . . . K 5 -63.184 23.703 -7.489 1 116.95 ? C6 RQ9 1101 B 1 HETATM 13 N N7 RQ9 . . . K 5 -59.88 24.142 -5.206 1 124.53 ? N7 RQ9 1101 B 1 HETATM 14 C C8 RQ9 . . . K 5 -64.099 21.745 -4.45 1 129.37 ? C8 RQ9 1101 B 1 HETATM 15 C C9 RQ9 . . . K 5 -63.838 22.512 -3.192 1 125.68 ? C9 RQ9 1101 B 1 HETATM 16 C C12 RQ9 . . . K 5 -67.281 25.02 0.231 1 126.97 ? C12 RQ9 1101 B 1 HETATM 17 C C19 RQ9 . . . K 5 -58.507 23.777 -5.563 1 137.18 ? C19 RQ9 1101 B 1 HETATM 18 C C22 RQ9 . . . K 5 -57.809 26.192 -6.074 1 130.84 ? C22 RQ9 1101 B 1 HETATM 19 C C11 RQ9 . . . K 5 -66.486 24.311 -0.652 1 125.01 ? C11 RQ9 1101 B 1 HETATM 20 C C15 RQ9 . . . K 5 -64.524 25.223 0.397 1 126.98 ? C15 RQ9 1101 B 1 HETATM 21 C C16 RQ9 . . . K 5 -62.955 23.486 -1.422 1 124.62 ? C16 RQ9 1101 B 1 HETATM 22 C C21 RQ9 . . . K 5 -57.573 24.952 -5.223 1 133.87 ? C21 RQ9 1101 B 1 HETATM 23 C C7 RQ9 . . . K 5 -63.154 23.221 -6.167 1 118.27 ? C7 RQ9 1101 B 1 HETATM 24 N N1 RQ9 . . . K 5 -62.264 24.689 -9.225 1 116.19 ? N1 RQ9 1101 B 1 HETATM 25 N N2 RQ9 . . . K 5 -64.146 23.693 -8.49 1 116.34 ? N2 RQ9 1101 B 1 HETATM 26 N N3 RQ9 . . . K 5 -64.209 22.606 -5.608 1 119.45 ? N3 RQ9 1101 B 1 HETATM 27 N N4 RQ9 . . . K 5 -64.845 23.084 -2.55 1 122.75 ? N4 RQ9 1101 B 1 HETATM 28 N N5 RQ9 . . . K 5 -64.289 23.694 -1.461 1 124.21 ? N5 RQ9 1101 B 1 HETATM 29 N N6 RQ9 . . . K 5 -62.035 23.397 -5.437 1 118.91 ? N6 RQ9 1101 B 1 HETATM 30 N N8 RQ9 . . . K 5 -60.898 24.494 -7.236 1 120.12 ? N8 RQ9 1101 B 1 HETATM 31 O O1 RQ9 . . . K 5 -57.059 22.866 -7.307 1 137.57 ? O1 RQ9 1101 B 1 HETATM 32 CL CL1 RQ9 . . . K 5 -64.617 26.938 2.468 1 180.39 ? CL1 RQ9 1101 B 1 HETATM 33 H H14 RQ9 . . . K 5 -67.264 26.312 1.791 0 154.26 ? H14 RQ9 1101 B 1 HETATM 34 H H17 RQ9 . . . K 5 -61.766 22.425 -2.763 0 148.35 ? H17 RQ9 1101 B 1 HETATM 35 H H21 RQ9 . . . K 5 -59.025 22.631 -7.203 0 153.33 ? H21 RQ9 1101 B 1 HETATM 36 H H20 RQ9 . . . K 5 -58.58 24.102 -7.602 0 153.33 ? H20 RQ9 1101 B 1 HETATM 37 H H3 RQ9 . . . K 5 -61.127 27.231 -10.976 0 157.97 ? H3 RQ9 1101 B 1 HETATM 38 H H1 RQ9 . . . K 5 -61.895 27.271 -9.586 0 157.97 ? H1 RQ9 1101 B 1 HETATM 39 H H2 RQ9 . . . K 5 -62.633 26.731 -10.886 0 157.97 ? H2 RQ9 1101 B 1 HETATM 40 H H4 RQ9 . . . K 5 -60.436 25.466 -9.623 0 140.72 ? H4 RQ9 1101 B 1 HETATM 41 H H6 RQ9 . . . K 5 -61.854 24.455 -11.855 0 139.44 ? H6 RQ9 1101 B 1 HETATM 42 H H7 RQ9 . . . K 5 -60.717 23.665 -11.076 0 139.44 ? H7 RQ9 1101 B 1 HETATM 43 H H5 RQ9 . . . K 5 -60.355 24.982 -11.888 0 139.44 ? H5 RQ9 1101 B 1 HETATM 44 H H8 RQ9 . . . K 5 -63.962 24.43 -10.336 0 139.43 ? H8 RQ9 1101 B 1 HETATM 45 H H18 RQ9 . . . K 5 -60.006 24.49 -4.408 0 149.94 ? H18 RQ9 1101 B 1 HETATM 46 H H11 RQ9 . . . K 5 -63.37 21.107 -4.591 0 155.76 ? H11 RQ9 1101 B 1 HETATM 47 H H10 RQ9 . . . K 5 -64.929 21.237 -4.347 0 155.76 ? H10 RQ9 1101 B 1 HETATM 48 H H13 RQ9 . . . K 5 -68.214 24.948 0.173 0 152.87 ? H13 RQ9 1101 B 1 HETATM 49 H H19 RQ9 . . . K 5 -58.275 22.976 -5.01 0 165.13 ? H19 RQ9 1101 B 1 HETATM 50 H H26 RQ9 . . . K 5 -57.211 26.903 -5.786 0 157.51 ? H26 RQ9 1101 B 1 HETATM 51 H H27 RQ9 . . . K 5 -58.731 26.484 -5.973 0 157.51 ? H27 RQ9 1101 B 1 HETATM 52 H H25 RQ9 . . . K 5 -57.637 25.982 -7.008 0 157.51 ? H25 RQ9 1101 B 1 HETATM 53 H H12 RQ9 . . . K 5 -66.876 23.765 -1.312 0 150.52 ? H12 RQ9 1101 B 1 HETATM 54 H H15 RQ9 . . . K 5 -63.594 25.299 0.455 0 152.89 ? H15 RQ9 1101 B 1 HETATM 55 H H16 RQ9 . . . K 5 -62.363 23.808 -0.753 0 150.06 ? H16 RQ9 1101 B 1 HETATM 56 H H24 RQ9 . . . K 5 -57.695 25.188 -4.278 0 161.15 ? H24 RQ9 1101 B 1 HETATM 57 H H23 RQ9 . . . K 5 -56.643 24.66 -5.34 0 161.15 ? H23 RQ9 1101 B 1 HETATM 58 H H9 RQ9 . . . K 5 -64.995 22.73 -5.959 0 143.84 ? H9 RQ9 1101 B 1 HETATM 59 H H22 RQ9 . . . K 5 -56.512 23.501 -7.189 0 165.59 ? H22 RQ9 1101 B 1 # _model_server_stats.io_time_ms 157 _model_server_stats.parse_time_ms 25 _model_server_stats.create_model_time_ms 83 _model_server_stats.query_time_ms 290 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 59 #