data_8BUS # _model_server_result.job_id lsofgOhvslqvBLuoeVWzvg _model_server_result.datetime_utc '2024-11-29 23:13:18' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8bus # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"M","auth_seq_id":1101}' # _entry.id 8BUS # _exptl.entry_id 8BUS _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 546.647 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1,3-dimethyl-5-[[[9-propan-2-yl-6-[(4-pyridin-2-ylphenyl)methylamino]purin-2-yl]amino]methyl]pyrazole-4-sulfonamide _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 8BUS _cell.length_a 249.522 _cell.length_b 249.522 _cell.length_c 218.546 _cell.Z_PDB 18 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8BUS _symmetry.cell_setting ? _symmetry.Int_Tables_number 152 _symmetry.space_group_name_Hall 'P 31 2"' _symmetry.space_group_name_H-M 'P 31 2 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? trimeric 3 author_defined_assembly 1 ? trimeric 3 author_defined_assembly 2 ? trimeric 3 author_defined_assembly 3 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,C,J,K,L,M,N,O 1 1 D,E,F,P,Q,R,S 2 1 G,H,I,T,U,V,W,X,Y,Z 3 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 5 M N N ? 5 Q N N ? 5 V N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 22 D CYS 18 1_555 A SG CYS 317 D CYS 313 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.044 ? disulf ? disulf2 G SG CYS 22 G CYS 18 1_555 G SG CYS 317 G CYS 313 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.047 ? covale ? covale1 B C TYR 184 E TYR 892 1_555 B N TPO 185 E TPO 893 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.336 ? covale ? covale2 B C TPO 185 E TPO 893 1_555 B N ASN 186 E ASN 894 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.335 ? covale ? covale3 E C TYR 184 B TYR 892 1_555 E N TPO 185 B TPO 893 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.334 ? covale ? covale4 E C TPO 185 B TPO 893 1_555 E N ASN 186 B ASN 894 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.334 ? covale ? covale5 H C TYR 184 H TYR 892 1_555 H N TPO 185 H TPO 893 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? covale ? covale6 H C TPO 185 H TPO 893 1_555 H N ASN 186 H ASN 894 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.334 ? # _chem_comp.formula 'C26 H30 N10 O2 S' _chem_comp.formula_weight 546.647 _chem_comp.id RMX _chem_comp.mon_nstd_flag . _chem_comp.name 1,3-dimethyl-5-[[[9-propan-2-yl-6-[(4-pyridin-2-ylphenyl)methylamino]purin-2-yl]amino]methyl]pyrazole-4-sulfonamide _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N2 N3 RMX sing 275 n y N2 C2 RMX doub 276 n y C4 N3 RMX sing 277 n n C3 C2 RMX sing 278 n n N3 C5 RMX sing 279 n y C2 C1 RMX sing 280 n y N1 S1 RMX sing 281 n n C5 C1 RMX doub 282 n y C5 C6 RMX sing 283 n n C1 S1 RMX sing 284 n n C6 N4 RMX sing 285 n n S1 O2 RMX doub 286 n n S1 O1 RMX doub 287 n n N4 C7 RMX sing 288 n n C7 N10 RMX doub 289 n y C7 N5 RMX sing 290 n y C24 C23 RMX sing 291 n n N10 C26 RMX sing 292 n y N5 C8 RMX doub 293 n y C9 N6 RMX sing 294 n n C9 C10 RMX sing 295 n n C26 N9 RMX sing 296 n y C26 C21 RMX doub 297 n y C8 C21 RMX sing 298 n y C8 N6 RMX sing 299 n n C23 N9 RMX sing 300 n n C23 C25 RMX sing 301 n n N9 C22 RMX sing 302 n y C21 N8 RMX sing 303 n y C20 C10 RMX doub 304 n y C20 C19 RMX sing 305 n y C10 C11 RMX sing 306 n y C22 N8 RMX doub 307 n y C19 C13 RMX doub 308 n y C11 C12 RMX doub 309 n y C13 C12 RMX sing 310 n y C13 C14 RMX sing 311 n n C14 C15 RMX doub 312 n y C14 N7 RMX sing 313 n y C15 C16 RMX sing 314 n y N7 C18 RMX doub 315 n y C16 C17 RMX doub 316 n y C18 C17 RMX sing 317 n y C6 H9 RMX sing 318 n n C6 H10 RMX sing 319 n n C4 H8 RMX sing 320 n n C4 H6 RMX sing 321 n n C4 H7 RMX sing 322 n n C3 H3 RMX sing 323 n n C3 H4 RMX sing 324 n n C3 H5 RMX sing 325 n n N1 H1 RMX sing 326 n n N1 H2 RMX sing 327 n n C9 H13 RMX sing 328 n n C9 H14 RMX sing 329 n n C12 H16 RMX sing 330 n n C11 H15 RMX sing 331 n n C15 H17 RMX sing 332 n n C16 H18 RMX sing 333 n n C17 H19 RMX sing 334 n n C18 H20 RMX sing 335 n n C19 H21 RMX sing 336 n n C20 H22 RMX sing 337 n n C22 H23 RMX sing 338 n n C23 H24 RMX sing 339 n n C24 H27 RMX sing 340 n n C24 H25 RMX sing 341 n n C24 H26 RMX sing 342 n n C25 H29 RMX sing 343 n n C25 H30 RMX sing 344 n n C25 H28 RMX sing 345 n n N4 H11 RMX sing 346 n n N6 H12 RMX sing 347 n n # _atom_sites.entry_id 8BUS _atom_sites.fract_transf_matrix[1][1] 0.004008 _atom_sites.fract_transf_matrix[1][2] 0.002314 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.004628 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.004576 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code J 4 SO4 D 1 1201 7 SO4 SO4 . K 4 SO4 D 1 1202 8 SO4 SO4 . L 4 SO4 D 1 1203 15 SO4 SO4 . M 5 RMX E 1 1101 1101 RMX D59 . N 4 SO4 F 1 301 2 SO4 SO4 . O 4 SO4 F 1 302 12 SO4 SO4 . P 4 SO4 A 1 1201 4 SO4 SO4 . Q 5 RMX B 1 1101 1101 RMX D59 . R 4 SO4 C 1 301 6 SO4 SO4 . S 4 SO4 C 1 302 11 SO4 SO4 . T 4 SO4 G 1 1201 5 SO4 SO4 . U 4 SO4 G 1 1202 10 SO4 SO4 . V 5 RMX H 1 1101 1101 RMX D59 . W 4 SO4 H 1 1102 9 SO4 SO4 . X 4 SO4 I 1 301 3 SO4 SO4 . Y 4 SO4 I 1 302 13 SO4 SO4 . Z 4 SO4 I 1 303 14 SO4 SO4 . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 RMX . . . M 5 -56.264 24.947 -4.802 1 149.95 ? C1 RMX 1101 E 1 HETATM 2 C C2 RMX . . . M 5 -55.289 25.104 -5.805 1 149.3 ? C2 RMX 1101 E 1 HETATM 3 C C6 RMX . . . M 5 -58.4 23.488 -4.612 1 139.72 ? C6 RMX 1101 E 1 HETATM 4 C C5 RMX . . . M 5 -57.169 24.027 -5.271 1 144.79 ? C5 RMX 1101 E 1 HETATM 5 C C4 RMX . . . M 5 -57.33 22.712 -7.432 1 134.11 ? C4 RMX 1101 E 1 HETATM 6 C C3 RMX . . . M 5 -54.07 25.964 -5.865 1 156.04 ? C3 RMX 1101 E 1 HETATM 7 N N1 RMX . . . M 5 -55.506 24.918 -2.285 1 158.21 ? N1 RMX 1101 E 1 HETATM 8 C C7 RMX . . . M 5 -60.571 24.127 -5.575 1 124.12 ? C7 RMX 1101 E 1 HETATM 9 O O1 RMX . . . M 5 -57.671 25.765 -2.824 1 148.39 ? O1 RMX 1101 E 1 HETATM 10 C C8 RMX . . . M 5 -62.707 23.211 -5.825 1 118.13 ? C8 RMX 1101 E 1 HETATM 11 C C9 RMX . . . M 5 -63.7 21.877 -4.018 1 119.32 ? C9 RMX 1101 E 1 HETATM 12 C C14 RMX . . . M 5 -65.492 25.156 0.417 1 113.07 ? C14 RMX 1101 E 1 HETATM 13 C C13 RMX . . . M 5 -65.021 24.326 -0.72 1 113.94 ? C13 RMX 1101 E 1 HETATM 14 C C12 RMX . . . M 5 -65.919 23.872 -1.679 1 115.07 ? C12 RMX 1101 E 1 HETATM 15 C C11 RMX . . . M 5 -65.493 23.091 -2.735 1 117.01 ? C11 RMX 1101 E 1 HETATM 16 C C10 RMX . . . M 5 -64.161 22.734 -2.863 1 117.45 ? C10 RMX 1101 E 1 HETATM 17 N N2 RMX . . . M 5 -55.589 24.317 -6.837 1 144.81 ? N2 RMX 1101 E 1 HETATM 18 O O2 RMX . . . M 5 -55.628 27.014 -3.422 1 157.2 ? O2 RMX 1101 E 1 HETATM 19 C C15 RMX . . . M 5 -64.663 26.044 1.081 1 112.1 ? C15 RMX 1101 E 1 HETATM 20 C C16 RMX . . . M 5 -65.164 26.782 2.133 1 112.75 ? C16 RMX 1101 E 1 HETATM 21 C C17 RMX . . . M 5 -66.474 26.611 2.511 1 112.83 ? C17 RMX 1101 E 1 HETATM 22 C C18 RMX . . . M 5 -67.238 25.704 1.816 1 112.32 ? C18 RMX 1101 E 1 HETATM 23 C C19 RMX . . . M 5 -63.685 23.957 -0.844 1 114.53 ? C19 RMX 1101 E 1 HETATM 24 C C20 RMX . . . M 5 -63.264 23.174 -1.903 1 116.94 ? C20 RMX 1101 E 1 HETATM 25 C C21 RMX . . . M 5 -62.686 23.613 -7.174 1 117.18 ? C21 RMX 1101 E 1 HETATM 26 C C22 RMX . . . M 5 -62.967 24.075 -9.23 1 115.83 ? C22 RMX 1101 E 1 HETATM 27 C C23 RMX . . . M 5 -60.769 25.251 -9.76 1 114.68 ? C23 RMX 1101 E 1 HETATM 28 C C24 RMX . . . M 5 -60.499 24.467 -11.026 1 114.39 ? C24 RMX 1101 E 1 HETATM 29 C C25 RMX . . . M 5 -61.203 26.67 -10.051 1 117.34 ? C25 RMX 1101 E 1 HETATM 30 C C26 RMX . . . M 5 -61.541 24.263 -7.586 1 117.9 ? C26 RMX 1101 E 1 HETATM 31 N N10 RMX . . . M 5 -60.462 24.55 -6.847 1 121.59 ? N10 RMX 1101 E 1 HETATM 32 N N3 RMX . . . M 5 -56.738 23.657 -6.499 1 143.64 ? N3 RMX 1101 E 1 HETATM 33 N N4 RMX . . . M 5 -59.535 24.375 -4.758 1 132.17 ? N4 RMX 1101 E 1 HETATM 34 N N5 RMX . . . M 5 -61.636 23.48 -5.052 1 120.06 ? N5 RMX 1101 E 1 HETATM 35 N N6 RMX . . . M 5 -63.756 22.562 -5.294 1 118.46 ? N6 RMX 1101 E 1 HETATM 36 N N7 RMX . . . M 5 -66.775 24.978 0.788 1 113.15 ? N7 RMX 1101 E 1 HETATM 37 N N8 RMX . . . M 5 -63.588 23.497 -8.226 1 116.52 ? N8 RMX 1101 E 1 HETATM 38 N N9 RMX . . . M 5 -61.733 24.563 -8.908 1 115.77 ? N9 RMX 1101 E 1 HETATM 39 S S1 RMX . . . M 5 -56.324 25.779 -3.284 1 178.22 ? S1 RMX 1101 E 1 HETATM 40 H H9 RMX . . . M 5 -58.22 23.352 -3.666 0 168.21 ? H9 RMX 1101 E 1 HETATM 41 H H10 RMX . . . M 5 -58.618 22.624 -5.003 0 168.21 ? H10 RMX 1101 E 1 HETATM 42 H H8 RMX . . . M 5 -56.647 22.383 -8.036 0 161.48 ? H8 RMX 1101 E 1 HETATM 43 H H6 RMX . . . M 5 -58.026 23.154 -7.942 0 161.48 ? H6 RMX 1101 E 1 HETATM 44 H H7 RMX . . . M 5 -57.712 21.969 -6.941 0 161.48 ? H7 RMX 1101 E 1 HETATM 45 H H3 RMX . . . M 5 -53.396 25.532 -6.413 0 187.79 ? H3 RMX 1101 E 1 HETATM 46 H H4 RMX . . . M 5 -53.722 26.095 -4.969 0 187.79 ? H4 RMX 1101 E 1 HETATM 47 H H5 RMX . . . M 5 -54.298 26.823 -6.252 0 187.79 ? H5 RMX 1101 E 1 HETATM 48 H H1 RMX . . . M 5 -54.695 24.873 -2.484 0 190.4 ? H1 RMX 1101 E 1 HETATM 49 H H2 RMX . . . M 5 -55.975 24.603 -1.669 0 190.4 ? H2 RMX 1101 E 1 HETATM 50 H H13 RMX . . . M 5 -62.779 21.588 -3.852 0 143.73 ? H13 RMX 1101 E 1 HETATM 51 H H14 RMX . . . M 5 -64.261 21.075 -4.063 0 143.73 ? H14 RMX 1101 E 1 HETATM 52 H H16 RMX . . . M 5 -66.831 24.1 -1.609 0 138.63 ? H16 RMX 1101 E 1 HETATM 53 H H15 RMX . . . M 5 -66.118 22.796 -3.378 0 140.96 ? H15 RMX 1101 E 1 HETATM 54 H H17 RMX . . . M 5 -63.759 26.143 0.812 0 135.07 ? H17 RMX 1101 E 1 HETATM 55 H H18 RMX . . . M 5 -64.612 27.398 2.588 0 135.85 ? H18 RMX 1101 E 1 HETATM 56 H H19 RMX . . . M 5 -66.841 27.103 3.228 0 135.94 ? H19 RMX 1101 E 1 HETATM 57 H H20 RMX . . . M 5 -68.14 25.582 2.072 0 135.34 ? H20 RMX 1101 E 1 HETATM 58 H H21 RMX . . . M 5 -63.06 24.243 -0.2 0 137.98 ? H21 RMX 1101 E 1 HETATM 59 H H22 RMX . . . M 5 -62.355 22.935 -1.972 0 140.88 ? H22 RMX 1101 E 1 HETATM 60 H H23 RMX . . . M 5 -63.335 24.15 -10.1 0 139.54 ? H23 RMX 1101 E 1 HETATM 61 H H24 RMX . . . M 5 -59.907 25.311 -9.268 0 138.16 ? H24 RMX 1101 E 1 HETATM 62 H H27 RMX . . . M 5 -61.314 24.417 -11.556 0 137.82 ? H27 RMX 1101 E 1 HETATM 63 H H25 RMX . . . M 5 -60.206 23.569 -10.795 0 137.82 ? H25 RMX 1101 E 1 HETATM 64 H H26 RMX . . . M 5 -59.805 24.913 -11.542 0 137.82 ? H26 RMX 1101 E 1 HETATM 65 H H29 RMX . . . M 5 -62.028 26.658 -10.565 0 141.36 ? H29 RMX 1101 E 1 HETATM 66 H H30 RMX . . . M 5 -60.509 27.123 -10.561 0 141.36 ? H30 RMX 1101 E 1 HETATM 67 H H28 RMX . . . M 5 -61.35 27.142 -9.213 0 141.36 ? H28 RMX 1101 E 1 HETATM 68 H H11 RMX . . . M 5 -59.556 25.113 -4.297 0 159.15 ? H11 RMX 1101 E 1 HETATM 69 H H12 RMX . . . M 5 -64.516 22.552 -5.741 0 142.71 ? H12 RMX 1101 E 1 # _model_server_stats.io_time_ms 110 _model_server_stats.parse_time_ms 22 _model_server_stats.create_model_time_ms 66 _model_server_stats.query_time_ms 252 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 69 #