data_8BUS # _model_server_result.job_id 65tqzmJbksx-sBMGL4MaqQ _model_server_result.datetime_utc '2024-11-26 13:24:26' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8bus # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"V","auth_seq_id":1101}' # _entry.id 8BUS # _exptl.entry_id 8BUS _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 546.647 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1,3-dimethyl-5-[[[9-propan-2-yl-6-[(4-pyridin-2-ylphenyl)methylamino]purin-2-yl]amino]methyl]pyrazole-4-sulfonamide _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 8BUS _cell.length_a 249.522 _cell.length_b 249.522 _cell.length_c 218.546 _cell.Z_PDB 18 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8BUS _symmetry.cell_setting ? _symmetry.Int_Tables_number 152 _symmetry.space_group_name_Hall 'P 31 2"' _symmetry.space_group_name_H-M 'P 31 2 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? trimeric 3 author_defined_assembly 1 ? trimeric 3 author_defined_assembly 2 ? trimeric 3 author_defined_assembly 3 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,C,J,K,L,M,N,O 1 1 D,E,F,P,Q,R,S 2 1 G,H,I,T,U,V,W,X,Y,Z 3 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 5 M N N ? 5 Q N N ? 5 V N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 22 D CYS 18 1_555 A SG CYS 317 D CYS 313 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.044 ? disulf ? disulf2 G SG CYS 22 G CYS 18 1_555 G SG CYS 317 G CYS 313 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.047 ? covale ? covale1 B C TYR 184 E TYR 892 1_555 B N TPO 185 E TPO 893 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.336 ? covale ? covale2 B C TPO 185 E TPO 893 1_555 B N ASN 186 E ASN 894 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.335 ? covale ? covale3 E C TYR 184 B TYR 892 1_555 E N TPO 185 B TPO 893 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.334 ? covale ? covale4 E C TPO 185 B TPO 893 1_555 E N ASN 186 B ASN 894 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.334 ? covale ? covale5 H C TYR 184 H TYR 892 1_555 H N TPO 185 H TPO 893 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? covale ? covale6 H C TPO 185 H TPO 893 1_555 H N ASN 186 H ASN 894 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.334 ? # _chem_comp.formula 'C26 H30 N10 O2 S' _chem_comp.formula_weight 546.647 _chem_comp.id RMX _chem_comp.mon_nstd_flag . _chem_comp.name 1,3-dimethyl-5-[[[9-propan-2-yl-6-[(4-pyridin-2-ylphenyl)methylamino]purin-2-yl]amino]methyl]pyrazole-4-sulfonamide _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N2 N3 RMX sing 275 n y N2 C2 RMX doub 276 n y C4 N3 RMX sing 277 n n C3 C2 RMX sing 278 n n N3 C5 RMX sing 279 n y C2 C1 RMX sing 280 n y N1 S1 RMX sing 281 n n C5 C1 RMX doub 282 n y C5 C6 RMX sing 283 n n C1 S1 RMX sing 284 n n C6 N4 RMX sing 285 n n S1 O2 RMX doub 286 n n S1 O1 RMX doub 287 n n N4 C7 RMX sing 288 n n C7 N10 RMX doub 289 n y C7 N5 RMX sing 290 n y C24 C23 RMX sing 291 n n N10 C26 RMX sing 292 n y N5 C8 RMX doub 293 n y C9 N6 RMX sing 294 n n C9 C10 RMX sing 295 n n C26 N9 RMX sing 296 n y C26 C21 RMX doub 297 n y C8 C21 RMX sing 298 n y C8 N6 RMX sing 299 n n C23 N9 RMX sing 300 n n C23 C25 RMX sing 301 n n N9 C22 RMX sing 302 n y C21 N8 RMX sing 303 n y C20 C10 RMX doub 304 n y C20 C19 RMX sing 305 n y C10 C11 RMX sing 306 n y C22 N8 RMX doub 307 n y C19 C13 RMX doub 308 n y C11 C12 RMX doub 309 n y C13 C12 RMX sing 310 n y C13 C14 RMX sing 311 n n C14 C15 RMX doub 312 n y C14 N7 RMX sing 313 n y C15 C16 RMX sing 314 n y N7 C18 RMX doub 315 n y C16 C17 RMX doub 316 n y C18 C17 RMX sing 317 n y C6 H9 RMX sing 318 n n C6 H10 RMX sing 319 n n C4 H8 RMX sing 320 n n C4 H6 RMX sing 321 n n C4 H7 RMX sing 322 n n C3 H3 RMX sing 323 n n C3 H4 RMX sing 324 n n C3 H5 RMX sing 325 n n N1 H1 RMX sing 326 n n N1 H2 RMX sing 327 n n C9 H13 RMX sing 328 n n C9 H14 RMX sing 329 n n C12 H16 RMX sing 330 n n C11 H15 RMX sing 331 n n C15 H17 RMX sing 332 n n C16 H18 RMX sing 333 n n C17 H19 RMX sing 334 n n C18 H20 RMX sing 335 n n C19 H21 RMX sing 336 n n C20 H22 RMX sing 337 n n C22 H23 RMX sing 338 n n C23 H24 RMX sing 339 n n C24 H27 RMX sing 340 n n C24 H25 RMX sing 341 n n C24 H26 RMX sing 342 n n C25 H29 RMX sing 343 n n C25 H30 RMX sing 344 n n C25 H28 RMX sing 345 n n N4 H11 RMX sing 346 n n N6 H12 RMX sing 347 n n # _atom_sites.entry_id 8BUS _atom_sites.fract_transf_matrix[1][1] 0.004008 _atom_sites.fract_transf_matrix[1][2] 0.002314 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.004628 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.004576 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code J 4 SO4 D 1 1201 7 SO4 SO4 . K 4 SO4 D 1 1202 8 SO4 SO4 . L 4 SO4 D 1 1203 15 SO4 SO4 . M 5 RMX E 1 1101 1101 RMX D59 . N 4 SO4 F 1 301 2 SO4 SO4 . O 4 SO4 F 1 302 12 SO4 SO4 . P 4 SO4 A 1 1201 4 SO4 SO4 . Q 5 RMX B 1 1101 1101 RMX D59 . R 4 SO4 C 1 301 6 SO4 SO4 . S 4 SO4 C 1 302 11 SO4 SO4 . T 4 SO4 G 1 1201 5 SO4 SO4 . U 4 SO4 G 1 1202 10 SO4 SO4 . V 5 RMX H 1 1101 1101 RMX D59 . W 4 SO4 H 1 1102 9 SO4 SO4 . X 4 SO4 I 1 301 3 SO4 SO4 . Y 4 SO4 I 1 302 13 SO4 SO4 . Z 4 SO4 I 1 303 14 SO4 SO4 . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 RMX . . . V 5 -134.626 9.645 14.785 1 141.74 ? C1 RMX 1101 H 1 HETATM 2 C C2 RMX . . . V 5 -134.373 8.468 15.513 1 142.22 ? C2 RMX 1101 H 1 HETATM 3 C C6 RMX . . . V 5 -134.378 10.305 12.305 1 129.61 ? C6 RMX 1101 H 1 HETATM 4 C C5 RMX . . . V 5 -134.29 9.389 13.485 1 135.39 ? C5 RMX 1101 H 1 HETATM 5 C C4 RMX . . . V 5 -133.384 7.331 12.309 1 120.63 ? C4 RMX 1101 H 1 HETATM 6 C C3 RMX . . . V 5 -134.546 8.152 16.962 1 144.42 ? C3 RMX 1101 H 1 HETATM 7 N N1 RMX . . . V 5 -136.762 11.042 15.366 1 151.01 ? N1 RMX 1101 H 1 HETATM 8 C C7 RMX . . . V 5 -132.28 11.059 11.298 1 115.17 ? C7 RMX 1101 H 1 HETATM 9 O O1 RMX . . . V 5 -134.853 12.18 14.495 1 143.95 ? O1 RMX 1101 H 1 HETATM 10 C C8 RMX . . . V 5 -131.495 11.594 9.164 1 108.42 ? C8 RMX 1101 H 1 HETATM 11 C C9 RMX . . . V 5 -132.924 12.837 7.599 1 109.41 ? C9 RMX 1101 H 1 HETATM 12 C C14 RMX . . . V 5 -133.412 18.42 9.087 1 102.08 ? C14 RMX 1101 H 1 HETATM 13 C C13 RMX . . . V 5 -133.277 16.987 8.726 1 102.96 ? C13 RMX 1101 H 1 HETATM 14 C C12 RMX . . . V 5 -132.402 16.591 7.719 1 103.75 ? C12 RMX 1101 H 1 HETATM 15 C C11 RMX . . . V 5 -132.287 15.261 7.364 1 105.58 ? C11 RMX 1101 H 1 HETATM 16 C C10 RMX . . . V 5 -133.049 14.29 7.992 1 107.03 ? C10 RMX 1101 H 1 HETATM 17 N N2 RMX . . . V 5 -133.906 7.535 14.686 1 137.16 ? N2 RMX 1101 H 1 HETATM 18 O O2 RMX . . . V 5 -134.841 11.239 16.778 1 157.2 ? O2 RMX 1101 H 1 HETATM 19 C C15 RMX . . . V 5 -133.875 18.84 10.323 1 100.69 ? C15 RMX 1101 H 1 HETATM 20 C C16 RMX . . . V 5 -133.987 20.191 10.581 1 102.66 ? C16 RMX 1101 H 1 HETATM 21 C C17 RMX . . . V 5 -133.653 21.092 9.598 1 105.01 ? C17 RMX 1101 H 1 HETATM 22 C C18 RMX . . . V 5 -133.215 20.606 8.389 1 104.23 ? C18 RMX 1101 H 1 HETATM 23 C C19 RMX . . . V 5 -134.053 16.012 9.343 1 103.07 ? C19 RMX 1101 H 1 HETATM 24 C C20 RMX . . . V 5 -133.936 14.683 8.981 1 106.34 ? C20 RMX 1101 H 1 HETATM 25 C C21 RMX . . . V 5 -130.373 10.779 9.41 1 107.71 ? C21 RMX 1101 H 1 HETATM 26 C C22 RMX . . . V 5 -128.575 9.642 9.464 1 106.03 ? C22 RMX 1101 H 1 HETATM 27 C C23 RMX . . . V 5 -128.72 8.618 11.79 1 108.02 ? C23 RMX 1101 H 1 HETATM 28 C C24 RMX . . . V 5 -128.356 7.221 11.334 1 105.48 ? C24 RMX 1101 H 1 HETATM 29 C C25 RMX . . . V 5 -127.584 9.277 12.544 1 117.34 ? C25 RMX 1101 H 1 HETATM 30 C C26 RMX . . . V 5 -130.337 10.166 10.646 1 109.97 ? C26 RMX 1101 H 1 HETATM 31 N N10 RMX . . . V 5 -131.247 10.26 11.623 1 113.52 ? N10 RMX 1101 H 1 HETATM 32 N N3 RMX . . . V 5 -133.859 8.108 13.444 1 135.44 ? N3 RMX 1101 H 1 HETATM 33 N N4 RMX . . . V 5 -133.246 11.202 12.216 1 124.63 ? N4 RMX 1101 H 1 HETATM 34 N N5 RMX . . . V 5 -132.435 11.706 10.123 1 110.37 ? N5 RMX 1101 H 1 HETATM 35 N N6 RMX . . . V 5 -131.665 12.241 7.999 1 108.07 ? N6 RMX 1101 H 1 HETATM 36 N N7 RMX . . . V 5 -133.094 19.299 8.117 1 103.14 ? N7 RMX 1101 H 1 HETATM 37 N N8 RMX . . . V 5 -129.248 10.441 8.665 1 105.71 ? N8 RMX 1101 H 1 HETATM 38 N N9 RMX . . . V 5 -129.173 9.442 10.674 1 108.5 ? N9 RMX 1101 H 1 HETATM 39 S S1 RMX . . . V 5 -135.215 11.148 15.408 1 178.22 ? S1 RMX 1101 H 1 HETATM 40 H H9 RMX . . . V 5 -135.195 10.829 12.371 0 156.08 ? H9 RMX 1101 H 1 HETATM 41 H H10 RMX . . . V 5 -134.427 9.772 11.493 0 156.08 ? H10 RMX 1101 H 1 HETATM 42 H H8 RMX . . . V 5 -133.566 6.392 12.461 0 145.3 ? H8 RMX 1101 H 1 HETATM 43 H H6 RMX . . . V 5 -132.43 7.463 12.203 0 145.3 ? H6 RMX 1101 H 1 HETATM 44 H H7 RMX . . . V 5 -133.841 7.622 11.505 0 145.3 ? H7 RMX 1101 H 1 HETATM 45 H H3 RMX . . . V 5 -134.721 7.204 17.068 0 173.86 ? H3 RMX 1101 H 1 HETATM 46 H H4 RMX . . . V 5 -135.292 8.66 17.317 0 173.86 ? H4 RMX 1101 H 1 HETATM 47 H H5 RMX . . . V 5 -133.737 8.387 17.443 0 173.86 ? H5 RMX 1101 H 1 HETATM 48 H H1 RMX . . . V 5 -137.061 10.454 15.879 0 181.76 ? H1 RMX 1101 H 1 HETATM 49 H H2 RMX . . . V 5 -137.11 11.587 14.836 0 181.76 ? H2 RMX 1101 H 1 HETATM 50 H H13 RMX . . . V 5 -133.658 12.332 8.009 0 131.84 ? H13 RMX 1101 H 1 HETATM 51 H H14 RMX . . . V 5 -133.017 12.761 6.627 0 131.84 ? H14 RMX 1101 H 1 HETATM 52 H H16 RMX . . . V 5 -131.882 17.237 7.273 0 125.05 ? H16 RMX 1101 H 1 HETATM 53 H H15 RMX . . . V 5 -131.681 15.012 6.686 0 127.24 ? H15 RMX 1101 H 1 HETATM 54 H H17 RMX . . . V 5 -134.112 18.202 10.984 0 121.38 ? H17 RMX 1101 H 1 HETATM 55 H H18 RMX . . . V 5 -134.29 20.491 11.423 0 123.74 ? H18 RMX 1101 H 1 HETATM 56 H H19 RMX . . . V 5 -133.722 22.022 9.748 0 126.56 ? H19 RMX 1101 H 1 HETATM 57 H H20 RMX . . . V 5 -132.986 21.222 7.71 0 125.63 ? H20 RMX 1101 H 1 HETATM 58 H H21 RMX . . . V 5 -134.664 16.258 10.016 0 124.23 ? H21 RMX 1101 H 1 HETATM 59 H H22 RMX . . . V 5 -134.467 14.035 9.413 0 128.16 ? H22 RMX 1101 H 1 HETATM 60 H H23 RMX . . . V 5 -127.751 9.239 9.228 0 127.78 ? H23 RMX 1101 H 1 HETATM 61 H H24 RMX . . . V 5 -129.477 8.53 12.428 0 130.18 ? H24 RMX 1101 H 1 HETATM 62 H H27 RMX . . . V 5 -127.589 7.265 10.737 0 127.12 ? H27 RMX 1101 H 1 HETATM 63 H H25 RMX . . . V 5 -129.111 6.826 10.865 0 127.12 ? H25 RMX 1101 H 1 HETATM 64 H H26 RMX . . . V 5 -128.133 6.676 12.109 0 127.12 ? H26 RMX 1101 H 1 HETATM 65 H H29 RMX . . . V 5 -126.805 9.342 11.964 0 141.36 ? H29 RMX 1101 H 1 HETATM 66 H H30 RMX . . . V 5 -127.362 8.745 13.327 0 141.36 ? H30 RMX 1101 H 1 HETATM 67 H H28 RMX . . . V 5 -127.854 10.169 12.824 0 141.36 ? H28 RMX 1101 H 1 HETATM 68 H H11 RMX . . . V 5 -133.18 11.865 12.776 0 150.1 ? H11 RMX 1101 H 1 HETATM 69 H H12 RMX . . . V 5 -130.979 12.307 7.45 0 130.24 ? H12 RMX 1101 H 1 # _model_server_stats.io_time_ms 127 _model_server_stats.parse_time_ms 34 _model_server_stats.create_model_time_ms 354 _model_server_stats.query_time_ms 255 _model_server_stats.encode_time_ms 6 _model_server_stats.element_count 69 #