data_8BUT
#
_model_server_result.job_id            CRcxU-xIQiiXiGYhfst9CA 
_model_server_result.datetime_utc      '2024-11-07 00:33:13' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          8but 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"N","auth_seq_id":1101}' 
#
_entry.id    8BUT 
#
_exptl.entry_id    8BUT 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              414.501 
_entity.id                          5 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            2-[[6-[[4-(2-hydroxyethyloxy)phenyl]methylamino]-9-propan-2-yl-purin-2-yl]amino]butan-1-ol 
_entity.pdbx_number_of_molecules    3 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            8BUT 
_cell.length_a            249.701 
_cell.length_b            249.701 
_cell.length_c            218.495 
_cell.Z_PDB               18 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 8BUT 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        152 
_symmetry.space_group_name_Hall    'P 31 2"' 
_symmetry.space_group_name_H-M     'P 31 2 1' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
? trimeric 3 author_defined_assembly 1 
? trimeric 3 author_defined_assembly 2 
? trimeric 3 author_defined_assembly 3 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,B,C,J,K,L,M,N,O,P,Q 1 1 
D,E,F,R,S,T,U,V,W,X 2 1 
G,H,I,Y,Z,AA,BA,CA,DA,EA,FA,GA 3 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 5 N N N 
? 5 V N N 
? 5 DA N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 22 A CYS 18 1_555 A SG CYS 317 A CYS 313 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.043 ? 
disulf ? disulf2 G SG CYS 22 G CYS 18 1_555 G SG CYS 317 G CYS 313 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.045 ? 
covale ? covale1 B C TYR 184 B TYR 892 1_555 B N TPO 185 B TPO 893 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.335 ? 
covale ? covale2 B C TPO 185 B TPO 893 1_555 B N ASN 186 B ASN 894 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.324 ? 
covale ? covale3 E C TYR 184 E TYR 892 1_555 E N TPO 185 E TPO 893 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.325 ? 
covale ? covale4 E C TPO 185 E TPO 893 1_555 E N ASN 186 E ASN 894 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.327 ? 
covale ? covale5 H C TYR 184 H TYR 892 1_555 H N TPO 185 H TPO 893 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.326 ? 
covale ? covale6 H C TPO 185 H TPO 893 1_555 H N ASN 186 H ASN 894 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? 
#
_chem_comp.formula           'C21 H30 N6 O3' 
_chem_comp.formula_weight    414.501 
_chem_comp.id                RQ5 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              2-[[6-[[4-(2-hydroxyethyloxy)phenyl]methylamino]-9-propan-2-yl-purin-2-yl]amino]butan-1-ol 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C19 C18 RQ5 sing 275 n n 
C20 C18 RQ5 sing 276 n n 
C18 N5 RQ5 sing 277 n n 
C17 N5 RQ5 sing 278 n y 
C17 N4 RQ5 doub 279 n y 
N5 C21 RQ5 sing 280 n y 
N4 C16 RQ5 sing 281 n y 
C21 C16 RQ5 doub 282 n y 
C21 N6 RQ5 sing 283 n y 
C16 C6 RQ5 sing 284 n y 
O1 C4 RQ5 sing 285 n n 
N6 C5 RQ5 doub 286 n y 
C6 N3 RQ5 sing 287 n n 
C6 N2 RQ5 doub 288 n y 
C4 C3 RQ5 sing 289 n n 
C5 N2 RQ5 sing 290 n y 
C5 N1 RQ5 sing 291 n n 
N3 C7 RQ5 sing 292 n n 
N1 C3 RQ5 sing 293 n n 
C3 C2 RQ5 sing 294 n n 
C7 C8 RQ5 sing 295 n n 
C2 C1 RQ5 sing 296 n n 
C8 C9 RQ5 doub 297 n y 
C8 C15 RQ5 sing 298 n y 
C9 C10 RQ5 sing 299 n y 
C15 C14 RQ5 doub 300 n y 
C10 C11 RQ5 doub 301 n y 
C14 C11 RQ5 sing 302 n y 
C11 O2 RQ5 sing 303 n n 
O2 C12 RQ5 sing 304 n n 
C12 C13 RQ5 sing 305 n n 
O3 C13 RQ5 sing 306 n n 
C1 H1 RQ5 sing 307 n n 
C1 H3 RQ5 sing 308 n n 
C1 H2 RQ5 sing 309 n n 
C2 H5 RQ5 sing 310 n n 
C2 H4 RQ5 sing 311 n n 
C3 H6 RQ5 sing 312 n n 
C4 H7 RQ5 sing 313 n n 
C4 H8 RQ5 sing 314 n n 
C7 H12 RQ5 sing 315 n n 
C7 H13 RQ5 sing 316 n n 
C9 H14 RQ5 sing 317 n n 
C10 H15 RQ5 sing 318 n n 
C12 H16 RQ5 sing 319 n n 
C12 H17 RQ5 sing 320 n n 
C13 H18 RQ5 sing 321 n n 
C13 H19 RQ5 sing 322 n n 
C14 H21 RQ5 sing 323 n n 
C15 H22 RQ5 sing 324 n n 
C17 H23 RQ5 sing 325 n n 
C19 H26 RQ5 sing 326 n n 
C19 H27 RQ5 sing 327 n n 
C19 H25 RQ5 sing 328 n n 
C18 H24 RQ5 sing 329 n n 
C20 H28 RQ5 sing 330 n n 
C20 H29 RQ5 sing 331 n n 
C20 H30 RQ5 sing 332 n n 
N1 H10 RQ5 sing 333 n n 
N3 H11 RQ5 sing 334 n n 
O1 H9 RQ5 sing 335 n n 
O3 H20 RQ5 sing 336 n n 
#
_atom_sites.entry_id                     8BUT 
_atom_sites.fract_transf_matrix[1][1]    0.004005 
_atom_sites.fract_transf_matrix[1][2]    0.002312 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.004624 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.004577 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
J 4 SO4 A 1 1201 1 SO4 SO4 . 
K 4 SO4 A 1 1202 9 SO4 SO4 . 
L 4 SO4 A 1 1203 11 SO4 SO4 . 
M 4 SO4 A 1 1204 12 SO4 SO4 . 
N 5 RQ5 B 1 1101 1101 RQ5 D61 . 
O 4 SO4 C 1 301 6 SO4 SO4 . 
P 4 SO4 C 1 302 13 SO4 SO4 . 
Q 4 SO4 C 1 303 20 SO4 SO4 . 
R 4 SO4 D 1 1201 3 SO4 SO4 . 
S 4 SO4 D 1 1202 5 SO4 SO4 . 
T 4 SO4 D 1 1203 16 SO4 SO4 . 
U 4 SO4 D 1 1204 21 SO4 SO4 . 
V 5 RQ5 E 1 1101 1101 RQ5 D61 . 
W 4 SO4 F 1 301 2 SO4 SO4 . 
X 4 SO4 F 1 302 17 SO4 SO4 . 
Y 4 SO4 G 1 1201 7 SO4 SO4 . 
Z 4 SO4 G 1 1202 8 SO4 SO4 . 
AA 4 SO4 G 1 1203 10 SO4 SO4 . 
BA 4 SO4 G 1 1204 15 SO4 SO4 . 
CA 4 SO4 G 1 1205 19 SO4 SO4 . 
DA 5 RQ5 H 1 1101 1101 RQ5 D61 . 
EA 4 SO4 I 1 301 4 SO4 SO4 . 
FA 4 SO4 I 1 302 14 SO4 SO4 . 
GA 4 SO4 I 1 303 18 SO4 SO4 . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 RQ5 . . . N 5 -59.586 23.467 -1.892 1 139.96 ? C1 RQ5 1101 B 1 
HETATM 2 C C2 RQ5 . . . N 5 -58.434 23.344 -2.869 1 144.13 ? C2 RQ5 1101 B 1 
HETATM 3 C C3 RQ5 . . . N 5 -58.882 23.298 -4.337 1 153.59 ? C3 RQ5 1101 B 1 
HETATM 4 C C4 RQ5 . . . N 5 -57.737 23.572 -5.305 1 154.51 ? C4 RQ5 1101 B 1 
HETATM 5 C C5 RQ5 . . . N 5 -61.031 24.036 -5.281 1 129.52 ? C5 RQ5 1101 B 1 
HETATM 6 C C6 RQ5 . . . N 5 -63.231 23.259 -5.34 1 125.96 ? C6 RQ5 1101 B 1 
HETATM 7 C C7 RQ5 . . . N 5 -64.136 22.158 -3.355 1 127.62 ? C7 RQ5 1101 B 1 
HETATM 8 C C8 RQ5 . . . N 5 -64.509 23.078 -2.214 1 128.36 ? C8 RQ5 1101 B 1 
HETATM 9 C C9 RQ5 . . . N 5 -65.831 23.219 -1.826 1 128.64 ? C9 RQ5 1101 B 1 
HETATM 10 C C10 RQ5 . . . N 5 -66.186 24.044 -0.774 1 130.27 ? C10 RQ5 1101 B 1 
HETATM 11 C C11 RQ5 . . . N 5 -65.206 24.716 -0.062 1 132.77 ? C11 RQ5 1101 B 1 
HETATM 12 C C12 RQ5 . . . N 5 -64.823 26.46 1.586 1 131.79 ? C12 RQ5 1101 B 1 
HETATM 13 C C13 RQ5 . . . N 5 -65.661 27.166 2.606 1 135.21 ? C13 RQ5 1101 B 1 
HETATM 14 C C14 RQ5 . . . N 5 -63.874 24.581 -0.426 1 128.95 ? C14 RQ5 1101 B 1 
HETATM 15 C C15 RQ5 . . . N 5 -63.537 23.759 -1.491 1 127.97 ? C15 RQ5 1101 B 1 
HETATM 16 C C17 RQ5 . . . N 5 -63.616 23.825 -8.796 1 121.6 ? C17 RQ5 1101 B 1 
HETATM 17 C C19 RQ5 . . . N 5 -60.928 23.745 -10.536 1 122.2 ? C19 RQ5 1101 B 1 
HETATM 18 C C21 RQ5 . . . N 5 -62.094 24.064 -7.247 1 124.72 ? C21 RQ5 1101 B 1 
HETATM 19 C C16 RQ5 . . . N 5 -63.257 23.535 -6.721 1 124.27 ? C16 RQ5 1101 B 1 
HETATM 20 C C18 RQ5 . . . N 5 -61.401 24.784 -9.557 1 121.31 ? C18 RQ5 1101 B 1 
HETATM 21 C C20 RQ5 . . . N 5 -62.022 25.964 -10.294 1 120.03 ? C20 RQ5 1101 B 1 
HETATM 22 N N1 RQ5 . . . N 5 -59.966 24.268 -4.504 1 144.69 ? N1 RQ5 1101 B 1 
HETATM 23 N N2 RQ5 . . . N 5 -62.107 23.524 -4.653 1 128.5 ? N2 RQ5 1101 B 1 
HETATM 24 N N3 RQ5 . . . N 5 -64.276 22.753 -4.669 1 126.24 ? N3 RQ5 1101 B 1 
HETATM 25 N N4 RQ5 . . . N 5 -64.221 23.389 -7.713 1 122.72 ? N4 RQ5 1101 B 1 
HETATM 26 N N5 RQ5 . . . N 5 -62.343 24.255 -8.582 1 122.16 ? N5 RQ5 1101 B 1 
HETATM 27 N N6 RQ5 . . . N 5 -60.957 24.338 -6.591 1 125.92 ? N6 RQ5 1101 B 1 
HETATM 28 O O1 RQ5 . . . N 5 -58.107 23.285 -6.643 1 156.23 ? O1 RQ5 1101 B 1 
HETATM 29 O O2 RQ5 . . . N 5 -65.671 25.478 0.977 1 138.44 ? O2 RQ5 1101 B 1 
HETATM 30 O O3 RQ5 . . . N 5 -67.038 26.873 2.418 1 157.96 ? O3 RQ5 1101 B 1 
HETATM 31 H H1 RQ5 . . . N 5 -59.252 23.377 -0.982 0 167.95 ? H1 RQ5 1101 B 1 
HETATM 32 H H3 RQ5 . . . N 5 -60.238 22.767 -2.068 0 167.95 ? H3 RQ5 1101 B 1 
HETATM 33 H H2 RQ5 . . . N 5 -60.009 24.337 -1.996 0 167.95 ? H2 RQ5 1101 B 1 
HETATM 34 H H5 RQ5 . . . N 5 -57.829 24.107 -2.746 0 172.96 ? H5 RQ5 1101 B 1 
HETATM 35 H H4 RQ5 . . . N 5 -57.93 22.528 -2.666 0 172.96 ? H4 RQ5 1101 B 1 
HETATM 36 H H6 RQ5 . . . N 5 -59.234 22.39 -4.564 0 184.31 ? H6 RQ5 1101 B 1 
HETATM 37 H H7 RQ5 . . . N 5 -57.475 24.515 -5.232 0 185.41 ? H7 RQ5 1101 B 1 
HETATM 38 H H8 RQ5 . . . N 5 -56.965 23.022 -5.053 0 185.41 ? H8 RQ5 1101 B 1 
HETATM 39 H H12 RQ5 . . . N 5 -63.206 21.873 -3.237 0 153.14 ? H12 RQ5 1101 B 1 
HETATM 40 H H13 RQ5 . . . N 5 -64.701 21.359 -3.311 0 153.14 ? H13 RQ5 1101 B 1 
HETATM 41 H H14 RQ5 . . . N 5 -66.504 22.745 -2.287 0 154.37 ? H14 RQ5 1101 B 1 
HETATM 42 H H15 RQ5 . . . N 5 -67.094 24.149 -0.542 0 156.33 ? H15 RQ5 1101 B 1 
HETATM 43 H H16 RQ5 . . . N 5 -64.494 27.092 0.914 0 158.14 ? H16 RQ5 1101 B 1 
HETATM 44 H H17 RQ5 . . . N 5 -64.052 26.03 2.012 0 158.14 ? H17 RQ5 1101 B 1 
HETATM 45 H H18 RQ5 . . . N 5 -65.522 28.134 2.533 0 162.25 ? H18 RQ5 1101 B 1 
HETATM 46 H H19 RQ5 . . . N 5 -65.39 26.887 3.505 0 162.25 ? H19 RQ5 1101 B 1 
HETATM 47 H H21 RQ5 . . . N 5 -63.203 25.044 0.048 0 154.74 ? H21 RQ5 1101 B 1 
HETATM 48 H H22 RQ5 . . . N 5 -62.63 23.661 -1.728 0 153.56 ? H22 RQ5 1101 B 1 
HETATM 49 H H23 RQ5 . . . N 5 -64.023 23.841 -9.652 0 145.92 ? H23 RQ5 1101 B 1 
HETATM 50 H H26 RQ5 . . . N 5 -60.283 24.144 -11.145 0 146.63 ? H26 RQ5 1101 B 1 
HETATM 51 H H27 RQ5 . . . N 5 -61.687 23.409 -11.043 0 146.63 ? H27 RQ5 1101 B 1 
HETATM 52 H H25 RQ5 . . . N 5 -60.509 23.012 -10.054 0 146.63 ? H25 RQ5 1101 B 1 
HETATM 53 H H24 RQ5 . . . N 5 -60.597 25.088 -9.058 0 145.57 ? H24 RQ5 1101 B 1 
HETATM 54 H H28 RQ5 . . . N 5 -62.822 25.669 -10.764 0 144.04 ? H28 RQ5 1101 B 1 
HETATM 55 H H29 RQ5 . . . N 5 -61.382 26.319 -10.935 0 144.04 ? H29 RQ5 1101 B 1 
HETATM 56 H H30 RQ5 . . . N 5 -62.259 26.658 -9.654 0 144.04 ? H30 RQ5 1101 B 1 
HETATM 57 H H10 RQ5 . . . N 5 -59.912 25.034 -4.075 0 173.62 ? H10 RQ5 1101 B 1 
HETATM 58 H H11 RQ5 . . . N 5 -65.076 22.782 -5.039 0 151.49 ? H11 RQ5 1101 B 1 
HETATM 59 H H9 RQ5 . . . N 5 -57.427 23.381 -7.137 0 187.47 ? H9 RQ5 1101 B 1 
HETATM 60 H H20 RQ5 . . . N 5 -67.279 27.137 1.65 0 189.56 ? H20 RQ5 1101 B 1 
#
_model_server_stats.io_time_ms              130 
_model_server_stats.parse_time_ms           26 
_model_server_stats.create_model_time_ms    57 
_model_server_stats.query_time_ms           275 
_model_server_stats.encode_time_ms          18 
_model_server_stats.element_count           60 
#