data_8BVL # _model_server_result.job_id O_WFVLWAz_zV7mK9zFSXtQ _model_server_result.datetime_utc '2024-11-23 04:46:29' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8bvl # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"I","auth_seq_id":602}' # _entry.id 8BVL # _exptl.entry_id 8BVL _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 65.409 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ZINC ION' _entity.pdbx_number_of_molecules 10 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90.31 _cell.angle_gamma 90 _cell.entry_id 8BVL _cell.length_a 53.908 _cell.length_b 59.263 _cell.length_c 57.206 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8BVL _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,E,F,G,M 1 1 B,H,I,J,K,L,N 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N ? 2 E N N ? 2 F N N ? 2 G N N ? 2 H N N ? 2 I N N ? 2 J N N ? 2 K N N ? 2 L N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A SG CYS 6 A CYS 371 1_555 C ZN ZN . A ZN 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.365 ? metalc ? metalc2 A SG CYS 11 A CYS 376 1_555 C ZN ZN . A ZN 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.34 ? metalc ? metalc3 A SG CYS 26 A CYS 391 1_555 C ZN ZN . A ZN 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.367 ? metalc ? metalc4 A SG CYS 29 A CYS 394 1_555 C ZN ZN . A ZN 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.346 ? metalc ? metalc5 A SG CYS 34 A CYS 399 1_555 E ZN ZN . A ZN 603 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.372 ? metalc ? metalc6 A SG CYS 37 A CYS 402 1_555 E ZN ZN . A ZN 603 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.283 ? metalc ? metalc7 A NE2 HIS 41 A HIS 406 1_555 E ZN ZN . A ZN 603 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.243 ? metalc ? metalc8 A SG CYS 46 A CYS 411 1_555 E ZN ZN . A ZN 603 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.37 ? metalc ? metalc9 A SG CYS 82 A CYS 447 1_555 D ZN ZN . A ZN 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.371 ? metalc ? metalc10 A SG CYS 85 A CYS 450 1_555 D ZN ZN . A ZN 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.338 ? metalc ? metalc11 A SG CYS 100 A CYS 465 1_555 D ZN ZN . A ZN 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.309 ? metalc ? metalc12 A SG CYS 103 A CYS 468 1_555 D ZN ZN . A ZN 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.38 ? metalc ? metalc13 A SG CYS 108 A CYS 473 1_555 F ZN ZN . A ZN 604 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.343 ? metalc ? metalc14 A SG CYS 128 A CYS 493 1_555 F ZN ZN . A ZN 604 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.377 ? metalc ? metalc15 A SG CYS 130 A CYS 495 1_555 G ZN ZN . A ZN 605 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.361 ? metalc ? metalc16 A SG CYS 137 A CYS 502 1_555 F ZN ZN . A ZN 604 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.367 ? metalc ? metalc17 A SG CYS 137 A CYS 502 1_555 G ZN ZN . A ZN 605 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.341 ? metalc ? metalc18 A SG CYS 141 A CYS 506 1_555 G ZN ZN . A ZN 605 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.316 ? metalc ? metalc19 A SG CYS 144 A CYS 509 1_555 F ZN ZN . A ZN 604 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.366 ? metalc ? metalc20 A SG CYS 144 A CYS 509 1_555 G ZN ZN . A ZN 605 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.379 ? metalc ? metalc21 B SG CYS 6 B CYS 371 1_555 H ZN ZN . B ZN 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.397 ? metalc ? metalc22 B SG CYS 11 B CYS 376 1_555 H ZN ZN . B ZN 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.37 ? metalc ? metalc23 B SG CYS 26 B CYS 391 1_555 H ZN ZN . B ZN 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.359 ? metalc ? metalc24 B SG CYS 29 B CYS 394 1_555 H ZN ZN . B ZN 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.312 ? metalc ? metalc25 B SG CYS 34 B CYS 399 1_555 J ZN ZN . B ZN 603 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.333 ? metalc ? metalc26 B SG CYS 37 B CYS 402 1_555 J ZN ZN . B ZN 603 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.309 ? metalc ? metalc27 B NE2 HIS 41 B HIS 406 1_555 J ZN ZN . B ZN 603 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.252 ? metalc ? metalc28 B SG CYS 46 B CYS 411 1_555 J ZN ZN . B ZN 603 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.382 ? metalc ? metalc29 B SG CYS 82 B CYS 447 1_555 I ZN ZN . B ZN 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.37 ? metalc ? metalc30 B SG CYS 85 B CYS 450 1_555 I ZN ZN . B ZN 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.335 ? metalc ? metalc31 B SG CYS 100 B CYS 465 1_555 I ZN ZN . B ZN 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.328 ? metalc ? metalc32 B SG CYS 103 B CYS 468 1_555 I ZN ZN . B ZN 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.376 ? metalc ? metalc33 B SG CYS 108 B CYS 473 1_555 K ZN ZN . B ZN 604 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.345 ? metalc ? metalc34 B SG CYS 128 B CYS 493 1_555 K ZN ZN . B ZN 604 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.316 ? metalc ? metalc35 B SG CYS 130 B CYS 495 1_555 L ZN ZN . B ZN 605 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.389 ? metalc ? metalc36 B SG CYS 137 B CYS 502 1_555 K ZN ZN . B ZN 604 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.338 ? metalc ? metalc37 B SG CYS 137 B CYS 502 1_555 L ZN ZN . B ZN 605 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.363 ? metalc ? metalc38 B SG CYS 141 B CYS 506 1_555 L ZN ZN . B ZN 605 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.308 ? metalc ? metalc39 B SG CYS 144 B CYS 509 1_555 K ZN ZN . B ZN 604 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.319 ? metalc ? metalc40 B SG CYS 144 B CYS 509 1_555 L ZN ZN . B ZN 605 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.381 ? # _chem_comp.formula 'Zn 2' _chem_comp.formula_weight 65.409 _chem_comp.id ZN _chem_comp.mon_nstd_flag . _chem_comp.name 'ZINC ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 8BVL _atom_sites.fract_transf_matrix[1][1] 0.01855 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.0001 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.016874 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.017481 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 ZN A 1 601 1 ZN ZN . D 2 ZN A 1 602 2 ZN ZN . E 2 ZN A 1 603 3 ZN ZN . F 2 ZN A 1 604 4 ZN ZN . G 2 ZN A 1 605 5 ZN ZN . H 2 ZN B 1 601 1 ZN ZN . I 2 ZN B 1 602 2 ZN ZN . J 2 ZN B 1 603 3 ZN ZN . K 2 ZN B 1 604 4 ZN ZN . L 2 ZN B 1 605 5 ZN ZN . M 3 HOH A 1 701 37 HOH HOH . M 3 HOH A 2 702 74 HOH HOH . M 3 HOH A 3 703 59 HOH HOH . M 3 HOH A 4 704 86 HOH HOH . M 3 HOH A 5 705 33 HOH HOH . M 3 HOH A 6 706 83 HOH HOH . M 3 HOH A 7 707 76 HOH HOH . M 3 HOH A 8 708 28 HOH HOH . M 3 HOH A 9 709 64 HOH HOH . M 3 HOH A 10 710 31 HOH HOH . M 3 HOH A 11 711 4 HOH HOH . M 3 HOH A 12 712 3 HOH HOH . M 3 HOH A 13 713 32 HOH HOH . M 3 HOH A 14 714 48 HOH HOH . M 3 HOH A 15 715 62 HOH HOH . M 3 HOH A 16 716 61 HOH HOH . M 3 HOH A 17 717 84 HOH HOH . M 3 HOH A 18 718 50 HOH HOH . M 3 HOH A 19 719 20 HOH HOH . M 3 HOH A 20 720 30 HOH HOH . M 3 HOH A 21 721 22 HOH HOH . M 3 HOH A 22 722 9 HOH HOH . M 3 HOH A 23 723 63 HOH HOH . M 3 HOH A 24 724 40 HOH HOH . M 3 HOH A 25 725 11 HOH HOH . M 3 HOH A 26 726 85 HOH HOH . M 3 HOH A 27 727 10 HOH HOH . M 3 HOH A 28 728 19 HOH HOH . M 3 HOH A 29 729 80 HOH HOH . M 3 HOH A 30 730 75 HOH HOH . M 3 HOH A 31 731 8 HOH HOH . M 3 HOH A 32 732 58 HOH HOH . M 3 HOH A 33 733 60 HOH HOH . M 3 HOH A 34 734 53 HOH HOH . M 3 HOH A 35 735 29 HOH HOH . M 3 HOH A 36 736 38 HOH HOH . M 3 HOH A 37 737 43 HOH HOH . M 3 HOH A 38 738 65 HOH HOH . M 3 HOH A 39 739 81 HOH HOH . N 3 HOH B 1 701 70 HOH HOH . N 3 HOH B 2 702 41 HOH HOH . N 3 HOH B 3 703 68 HOH HOH . N 3 HOH B 4 704 46 HOH HOH . N 3 HOH B 5 705 25 HOH HOH . N 3 HOH B 6 706 6 HOH HOH . N 3 HOH B 7 707 21 HOH HOH . N 3 HOH B 8 708 15 HOH HOH . N 3 HOH B 9 709 7 HOH HOH . N 3 HOH B 10 710 5 HOH HOH . N 3 HOH B 11 711 2 HOH HOH . N 3 HOH B 12 712 23 HOH HOH . N 3 HOH B 13 713 17 HOH HOH . N 3 HOH B 14 714 54 HOH HOH . N 3 HOH B 15 715 45 HOH HOH . N 3 HOH B 16 716 26 HOH HOH . N 3 HOH B 17 717 49 HOH HOH . N 3 HOH B 18 718 88 HOH HOH . N 3 HOH B 19 719 39 HOH HOH . N 3 HOH B 20 720 35 HOH HOH . N 3 HOH B 21 721 77 HOH HOH . N 3 HOH B 22 722 47 HOH HOH . N 3 HOH B 23 723 87 HOH HOH . N 3 HOH B 24 724 16 HOH HOH . N 3 HOH B 25 725 66 HOH HOH . N 3 HOH B 26 726 89 HOH HOH . N 3 HOH B 27 727 36 HOH HOH . N 3 HOH B 28 728 79 HOH HOH . N 3 HOH B 29 729 52 HOH HOH . N 3 HOH B 30 730 78 HOH HOH . N 3 HOH B 31 731 71 HOH HOH . N 3 HOH B 32 732 72 HOH HOH . N 3 HOH B 33 733 14 HOH HOH . N 3 HOH B 34 734 24 HOH HOH . N 3 HOH B 35 735 69 HOH HOH . N 3 HOH B 36 736 13 HOH HOH . N 3 HOH B 37 737 67 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol ZN _atom_site.label_atom_id ZN _atom_site.label_comp_id ZN _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id I _atom_site.label_entity_id 2 _atom_site.Cartn_x -22.081 _atom_site.Cartn_y -30.002 _atom_site.Cartn_z -5.141 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 29.44 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id ZN _atom_site.auth_comp_id ZN _atom_site.auth_seq_id 602 _atom_site.auth_asym_id B _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 81 _model_server_stats.query_time_ms 413 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 1 #